RNA–Protein interactions for RNA: ENST00000637881.1

CDKL5-211, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 1,782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-211ENST00000637881 MAGEA1P43355 309 aa8.4□□□□□ -1.07
CDKL5-211ENST00000637881 RPL5P46777 297 aaKnown RBP8.4□□□□□ -1.07
CDKL5-211ENST00000637881 RFX5P48382 616 aaPredicted RBP8.4□□□□□ -1.07
CDKL5-211ENST00000637881 FXR2P51116 673 aaKnown RBP eCLIP8.4□□□□□ -1.07
CDKL5-211ENST00000637881 PFKPQ01813 784 aa8.4□□□□□ -1.07
CDKL5-211ENST00000637881 GPR162Q16538 588 aa8.4□□□□□ -1.07
CDKL5-211ENST00000637881 ARL13BQ3SXY8 428 aa8.4□□□□□ -1.07
CDKL5-211ENST00000637881 ZNF658Q5TYW1 1059 aaPredicted RBP8.4□□□□□ -1.07
CDKL5-211ENST00000637881 ZNF804AQ7Z570 1209 aa8.4□□□□□ -1.07
CDKL5-211ENST00000637881 WDR75Q8IWA0 830 aaKnown RBP8.4□□□□□ -1.07
CDKL5-211ENST00000637881 ARHGAP24Q8N264 748 aa8.4□□□□□ -1.07
CDKL5-211ENST00000637881 SPATA5Q8NB90 893 aa8.4□□□□□ -1.07
CDKL5-211ENST00000637881 NKX2-3Q8TAU0 364 aa8.4□□□□□ -1.07
CDKL5-211ENST00000637881 PYROXD1Q8WU10 500 aa8.4□□□□□ -1.07
CDKL5-211ENST00000637881 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.4□□□□□ -1.07
CDKL5-211ENST00000637881 WASF1Q92558 559 aa8.4□□□□□ -1.07
CDKL5-211ENST00000637881 EME1Q96AY2 570 aa8.4□□□□□ -1.07
CDKL5-211ENST00000637881 MS4A14Q96JA4 679 aa8.4□□□□□ -1.07
CDKL5-211ENST00000637881 PRICKLE1Q96MT3 831 aaPredicted RBP8.4□□□□□ -1.07
CDKL5-211ENST00000637881 GPR101Q96P66 508 aaPredicted RBP8.4□□□□□ -1.07
CDKL5-211ENST00000637881 FMO2Q99518 471 aa8.4□□□□□ -1.07
CDKL5-211ENST00000637881 ZMYND12Q9H0C1 365 aa8.4□□□□□ -1.07
CDKL5-211ENST00000637881 NEUROG2Q9H2A3 272 aa8.4□□□□□ -1.07
CDKL5-211ENST00000637881 CCDC68Q9H2F9 335 aa8.4□□□□□ -1.07
CDKL5-211ENST00000637881 AZI2Q9H6S1 392 aa8.4□□□□□ -1.07
CDKL5-211ENST00000637881 KRT82Q9NSB4 513 aa8.4□□□□□ -1.07
CDKL5-211ENST00000637881 FBXO9Q9UK97 447 aaPredicted RBP8.4□□□□□ -1.07
CDKL5-211ENST00000637881 HPS5Q9UPZ3 1129 aa8.4□□□□□ -1.07
CDKL5-211ENST00000637881 TBKBP1A7MCY6 615 aa8.39□□□□□ -1.07
CDKL5-211ENST00000637881 C6orf229H3BNL8 230 aa8.39□□□□□ -1.07
CDKL5-211ENST00000637881 EYA2O00167 538 aa8.39□□□□□ -1.07
CDKL5-211ENST00000637881 PGRMC1O00264 195 aaKnown RBP8.39□□□□□ -1.07
CDKL5-211ENST00000637881 DDX3XO00571 662 aaKnown RBP eCLIP8.39□□□□□ -1.07
CDKL5-211ENST00000637881 VILLO15195 856 aa8.39□□□□□ -1.07
CDKL5-211ENST00000637881 GTPBP6O43824 516 aaPredicted RBP8.39□□□□□ -1.07
CDKL5-211ENST00000637881 CLASP2O75122 1294 aaKnown RBP8.39□□□□□ -1.07
CDKL5-211ENST00000637881 ENTPD5O75356 428 aa8.39□□□□□ -1.07
CDKL5-211ENST00000637881 OXSR1O95747 527 aaPredicted RBP8.39□□□□□ -1.07
CDKL5-211ENST00000637881 ZCCHC18P0CG32 403 aa8.39□□□□□ -1.07
CDKL5-211ENST00000637881 MYCLP1P12525 358 aaPredicted RBP8.39□□□□□ -1.07
CDKL5-211ENST00000637881 ZNF12P17014 697 aa8.39□□□□□ -1.07
CDKL5-211ENST00000637881 EPHB2P29323 1055 aa8.39□□□□□ -1.07
CDKL5-211ENST00000637881 PPARGP37231 505 aaPredicted RBP8.39□□□□□ -1.07
CDKL5-211ENST00000637881 CYP27A1Q02318 531 aa8.39□□□□□ -1.07
CDKL5-211ENST00000637881 CHRNDQ07001 517 aa8.39□□□□□ -1.07
CDKL5-211ENST00000637881 DMPKQ09013 629 aa8.39□□□□□ -1.07
CDKL5-211ENST00000637881 TFCP2Q12800 502 aa8.39□□□□□ -1.07
CDKL5-211ENST00000637881 ARHGEF6Q15052 776 aa8.39□□□□□ -1.07
CDKL5-211ENST00000637881 KHDC1Q4VXA5 237 aaKnown RBP8.39□□□□□ -1.07
CDKL5-211ENST00000637881 FYB2Q5VWT5 728 aa8.39□□□□□ -1.07
CDKL5-211ENST00000637881 RRAGBQ5VZM2 374 aa8.39□□□□□ -1.07
CDKL5-211ENST00000637881 PCNX4Q63HM2 1172 aa8.39□□□□□ -1.07
CDKL5-211ENST00000637881 NOSTRINQ8IVI9 506 aa8.39□□□□□ -1.07
CDKL5-211ENST00000637881 MIGA1Q8NAN2 632 aa8.39□□□□□ -1.07
CDKL5-211ENST00000637881 ZNF398Q8TD17 642 aa8.39□□□□□ -1.07
CDKL5-211ENST00000637881 LPIN2Q92539 896 aa8.39□□□□□ -1.07
CDKL5-211ENST00000637881 USP6NLQ92738 828 aa8.39□□□□□ -1.07
CDKL5-211ENST00000637881 SGF29Q96ES7 293 aa8.39□□□□□ -1.07
CDKL5-211ENST00000637881 NSMCE3Q96MG7 304 aa8.39□□□□□ -1.07
CDKL5-211ENST00000637881 SRPK1Q96SB4 655 aaKnown RBP8.39□□□□□ -1.07
CDKL5-211ENST00000637881 SLC39A3Q9BRY0 314 aa8.39□□□□□ -1.07
CDKL5-211ENST00000637881 CUEDC2Q9H467 287 aa8.39□□□□□ -1.07
CDKL5-211ENST00000637881 USP29Q9HBJ7 922 aa8.39□□□□□ -1.07
CDKL5-211ENST00000637881 STX8Q9UNK0 236 aa8.39□□□□□ -1.07
CDKL5-211ENST00000637881 MINPP1Q9UNW1 487 aa8.39□□□□□ -1.07
CDKL5-211ENST00000637881 UTP11Q9Y3A2 253 aaKnown RBP8.39□□□□□ -1.07
CDKL5-211ENST00000637881 A0A1B0GUL6 1792 aa8.38□□□□□ -1.07
CDKL5-211ENST00000637881 COL24A1Q17RW2 1714 aa8.38□□□□□ -1.07
CDKL5-211ENST00000637881 KLF18A0A0U1RQI7 1052 aa8.38□□□□□ -1.07
CDKL5-211ENST00000637881 FAM47E-STBD1D6RA91 191 aa8.38□□□□□ -1.07
CDKL5-211ENST00000637881 RIMBP2O15034 1052 aa8.38□□□□□ -1.07
CDKL5-211ENST00000637881 MAGEB2O15479 319 aa8.38□□□□□ -1.07
CDKL5-211ENST00000637881 ADCY3O60266 1144 aa8.38□□□□□ -1.07
CDKL5-211ENST00000637881 TBCAO75347 108 aaKnown RBP8.38□□□□□ -1.07
CDKL5-211ENST00000637881 BAIAP3O94812 1187 aa8.38□□□□□ -1.07
CDKL5-211ENST00000637881 PHBP35232 272 aa8.38□□□□□ -1.07
CDKL5-211ENST00000637881 DRG2P55039 364 aaKnown RBP8.38□□□□□ -1.07
CDKL5-211ENST00000637881 TIMM10P62072 90 aa8.38□□□□□ -1.07
CDKL5-211ENST00000637881 CDR2Q01850 454 aa8.38□□□□□ -1.07
CDKL5-211ENST00000637881 CYP4A11Q02928 519 aa8.38□□□□□ -1.07
CDKL5-211ENST00000637881 MGAT5Q09328 741 aa8.38□□□□□ -1.07
CDKL5-211ENST00000637881 ASPHQ12797 758 aa8.38□□□□□ -1.07
CDKL5-211ENST00000637881 NAB2Q15742 525 aa8.38□□□□□ -1.07
CDKL5-211ENST00000637881 CLUL1Q15846 466 aa8.38□□□□□ -1.07
CDKL5-211ENST00000637881 SEPT7Q16181 437 aaKnown RBP8.38□□□□□ -1.07
CDKL5-211ENST00000637881 MAP3K21Q5TCX8 1036 aa8.38□□□□□ -1.07
CDKL5-211ENST00000637881 DTHD1Q6ZMT9 781 aa8.38□□□□□ -1.07
CDKL5-211ENST00000637881 GRAMD1CQ8IYS0 662 aa8.38□□□□□ -1.07
CDKL5-211ENST00000637881 LSMEM2Q8N112 164 aa8.38□□□□□ -1.07
CDKL5-211ENST00000637881 ALLCQ8N6M5 410 aa8.38□□□□□ -1.07
CDKL5-211ENST00000637881 FAM133AQ8N9E0 248 aa8.38□□□□□ -1.07
CDKL5-211ENST00000637881 CCDC110Q8TBZ0 833 aa8.38□□□□□ -1.07
CDKL5-211ENST00000637881 GIMAP1Q8WWP7 306 aa8.38□□□□□ -1.07
CDKL5-211ENST00000637881 NMD3Q96D46 503 aaKnown RBP8.38□□□□□ -1.07
CDKL5-211ENST00000637881 LRRC37BQ96QE4 947 aa8.38□□□□□ -1.07
CDKL5-211ENST00000637881 UIMC1Q96RL1 719 aa8.38□□□□□ -1.07
CDKL5-211ENST00000637881 STK33Q9BYT3 514 aa8.38□□□□□ -1.07
CDKL5-211ENST00000637881 KIAA1683Q9H0B3 1180 aa8.38□□□□□ -1.07
CDKL5-211ENST00000637881 RBM38Q9H0Z9 239 aaKnown RBP8.38□□□□□ -1.07
CDKL5-211ENST00000637881 TMEM60Q9H2L4 133 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms