RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 TMEM206Q9H813 350 aa18.81■□□□□ 0.6
CLN6-218ENST00000637223 MYH11P35749 1972 aa18.81■□□□□ 0.6
CLN6-218ENST00000637223 ZMYM2Q9UBW7 1377 aa18.81■□□□□ 0.6
CLN6-218ENST00000637223 LINC01553A4QN01 128 aa18.8■□□□□ 0.6
CLN6-218ENST00000637223 OFD1O75665 1012 aa18.8■□□□□ 0.6
CLN6-218ENST00000637223 MCM4P33991 863 aa18.8■□□□□ 0.6
CLN6-218ENST00000637223 PPP2R2DQ66LE6 453 aa18.8■□□□□ 0.6
CLN6-218ENST00000637223 SPRED2Q7Z698 418 aa18.8■□□□□ 0.6
CLN6-218ENST00000637223 CMTR2Q8IYT2 770 aaKnown RBP18.8■□□□□ 0.6
CLN6-218ENST00000637223 FIBCD1Q8N539 461 aa18.8■□□□□ 0.6
CLN6-218ENST00000637223 SLC28A3Q9HAS3 691 aa18.8■□□□□ 0.6
CLN6-218ENST00000637223 RMND1Q9NWS8 449 aa18.8■□□□□ 0.6
CLN6-218ENST00000637223 KLK14Q9P0G3 267 aa18.8■□□□□ 0.6
CLN6-218ENST00000637223 HCSTQ9UBK5 93 aa18.8■□□□□ 0.6
CLN6-218ENST00000637223 MRPL42Q9Y6G3 142 aaKnown RBP18.8■□□□□ 0.6
CLN6-218ENST00000637223 TTC3P53804 2025 aa18.79■□□□□ 0.6
CLN6-218ENST00000637223 COL4A6Q14031 1691 aa18.79■□□□□ 0.6
CLN6-218ENST00000637223 UBE4BO95155 1302 aa18.79■□□□□ 0.6
CLN6-218ENST00000637223 RECQL4O94761 1208 aa18.79■□□□□ 0.6
CLN6-218ENST00000637223 MLH1P40692 756 aa18.79■□□□□ 0.6
CLN6-218ENST00000637223 GRM5P41594 1212 aa18.79■□□□□ 0.6
CLN6-218ENST00000637223 AFF1P51825 1210 aaKnown RBP18.79■□□□□ 0.6
CLN6-218ENST00000637223 TMEM192Q8IY95 271 aa18.79■□□□□ 0.6
CLN6-218ENST00000637223 SMYD4Q8IYR2 804 aaPredicted RBP18.79■□□□□ 0.6
CLN6-218ENST00000637223 SPATA20Q8TB22 786 aa18.79■□□□□ 0.6
CLN6-218ENST00000637223 ZFP42Q96MM3 310 aa18.79■□□□□ 0.6
CLN6-218ENST00000637223 GSDMAQ96QA5 445 aa18.79■□□□□ 0.6
CLN6-218ENST00000637223 GAD1Q99259 594 aa18.79■□□□□ 0.6
CLN6-218ENST00000637223 MSTO1Q9BUK6 570 aa18.79■□□□□ 0.6
CLN6-218ENST00000637223 CCDC94Q9BW85 323 aaPredicted RBP18.79■□□□□ 0.6
CLN6-218ENST00000637223 CLSTN2Q9H4D0 955 aa18.79■□□□□ 0.6
CLN6-218ENST00000637223 UBN1Q9NPG3 1134 aa18.79■□□□□ 0.6
CLN6-218ENST00000637223 GIT1Q9Y2X7 761 aa18.79■□□□□ 0.6
CLN6-218ENST00000637223 MYO9BQ13459 2157 aa18.78■□□□□ 0.6
CLN6-218ENST00000637223 A0A0B4J269 797 aa18.78■□□□□ 0.6
CLN6-218ENST00000637223 ARL5CA6NH57 179 aa18.78■□□□□ 0.6
CLN6-218ENST00000637223 ADSSP30520 456 aa18.78■□□□□ 0.6
CLN6-218ENST00000637223 TAP1Q03518 808 aa18.78■□□□□ 0.6
CLN6-218ENST00000637223 BMT2Q1RMZ1 405 aa18.78■□□□□ 0.6
CLN6-218ENST00000637223 NOMO2Q5JPE7 1267 aa18.78■□□□□ 0.6
CLN6-218ENST00000637223 ZBTB41Q5SVQ8 909 aa18.78■□□□□ 0.6
CLN6-218ENST00000637223 ISM2Q6H9L7 571 aa18.78■□□□□ 0.6
CLN6-218ENST00000637223 SLFN12LQ6IEE8 588 aa18.78■□□□□ 0.6
CLN6-218ENST00000637223 URGCPQ8TCY9 931 aa18.78■□□□□ 0.6
CLN6-218ENST00000637223 POMGNT1Q8WZA1 660 aa18.78■□□□□ 0.6
CLN6-218ENST00000637223 GBP3Q9H0R5 595 aa18.78■□□□□ 0.6
CLN6-218ENST00000637223 CERS4Q9HA82 394 aa18.78■□□□□ 0.6
CLN6-218ENST00000637223 TYW1Q9NV66 732 aaKnown RBP18.78■□□□□ 0.6
CLN6-218ENST00000637223 MAN1B1Q9UKM7 699 aa18.78■□□□□ 0.6
CLN6-218ENST00000637223 MTUS1Q9ULD2 1270 aa18.78■□□□□ 0.6
CLN6-218ENST00000637223 MAPK8IP1Q9UQF2 711 aa18.78■□□□□ 0.6
CLN6-218ENST00000637223 STYXL1Q9Y6J8 313 aa18.78■□□□□ 0.6
CLN6-218ENST00000637223 POMCP01189 267 aa18.77■□□□□ 0.6
CLN6-218ENST00000637223 IGFBP4P22692 258 aa18.77■□□□□ 0.6
CLN6-218ENST00000637223 SCNN1GP51170 649 aa18.77■□□□□ 0.6
CLN6-218ENST00000637223 SPOUT1Q5T280 376 aaKnown RBP18.77■□□□□ 0.6
CLN6-218ENST00000637223 LRRC55Q6ZSA7 311 aa18.77■□□□□ 0.6
CLN6-218ENST00000637223 LRRC43Q8N309 656 aa18.77■□□□□ 0.6
CLN6-218ENST00000637223 RPS6KC1Q96S38 1066 aa18.77■□□□□ 0.6
CLN6-218ENST00000637223 CBWD1Q9BRT8 395 aa18.77■□□□□ 0.6
CLN6-218ENST00000637223 MRPL9Q9BYD2 267 aaKnown RBP18.77■□□□□ 0.6
CLN6-218ENST00000637223 NUP62CLQ9H1M0 184 aa18.77■□□□□ 0.6
CLN6-218ENST00000637223 CXCL16Q9H2A7 254 aa18.77■□□□□ 0.6
CLN6-218ENST00000637223 PCIF1Q9H4Z3 704 aa18.77■□□□□ 0.6
CLN6-218ENST00000637223 TBC1D13Q9NVG8 400 aa18.77■□□□□ 0.6
CLN6-218ENST00000637223 MIOSQ9NXC5 875 aa18.77■□□□□ 0.6
CLN6-218ENST00000637223 AGO2Q9UKV8 859 aaKnown RBP18.77■□□□□ 0.6
CLN6-218ENST00000637223 NCOR1O75376 2440 aa18.76■□□□□ 0.59
CLN6-218ENST00000637223 BIN1O00499 593 aa18.76■□□□□ 0.59
CLN6-218ENST00000637223 OGTO15294 1046 aa18.76■□□□□ 0.59
CLN6-218ENST00000637223 TGFB1I1O43294 461 aa18.76■□□□□ 0.59
CLN6-218ENST00000637223 FAM189A1O60320 539 aa18.76■□□□□ 0.59
CLN6-218ENST00000637223 TNFSF9P41273 254 aa18.76■□□□□ 0.59
CLN6-218ENST00000637223 YARSP54577 528 aaKnown RBP18.76■□□□□ 0.59
CLN6-218ENST00000637223 ADGRE1Q14246 886 aa18.76■□□□□ 0.59
CLN6-218ENST00000637223 KNOP1Q1ED39 458 aaKnown RBP18.76■□□□□ 0.59
CLN6-218ENST00000637223 ARMCX5Q6P1M9 558 aa18.76■□□□□ 0.59
CLN6-218ENST00000637223 SAAL1Q96ER3 474 aa18.76■□□□□ 0.59
CLN6-218ENST00000637223 ACAP3Q96P50 834 aa18.76■□□□□ 0.59
CLN6-218ENST00000637223 NECAB3Q96P71 396 aaPredicted RBP18.76■□□□□ 0.59
CLN6-218ENST00000637223 C17orf80Q9BSJ5 609 aa18.76■□□□□ 0.59
CLN6-218ENST00000637223 C1QTNF1Q9BXJ1 281 aa18.76■□□□□ 0.59
CLN6-218ENST00000637223 AGPAT3Q9NRZ7 376 aa18.76■□□□□ 0.59
CLN6-218ENST00000637223 CLIC2O15247 247 aa18.75■□□□□ 0.59
CLN6-218ENST00000637223 MEFVO15553 781 aaPredicted RBP18.75■□□□□ 0.59
CLN6-218ENST00000637223 MBD3O95983 291 aa18.75■□□□□ 0.59
CLN6-218ENST00000637223 CLTAP09496 248 aa18.75■□□□□ 0.59
CLN6-218ENST00000637223 LINC00271P0C7V0 271 aa18.75■□□□□ 0.59
CLN6-218ENST00000637223 CXCL8P10145 99 aa18.75■□□□□ 0.59
CLN6-218ENST00000637223 GARTP22102 1010 aa18.75■□□□□ 0.59
CLN6-218ENST00000637223 ACOT2P49753 483 aa18.75■□□□□ 0.59
CLN6-218ENST00000637223 RNASELQ05823 741 aaKnown RBP18.75■□□□□ 0.59
CLN6-218ENST00000637223 ZNF658Q5TYW1 1059 aaPredicted RBP18.75■□□□□ 0.59
CLN6-218ENST00000637223 HS2ST1Q7LGA3 356 aa18.75■□□□□ 0.59
CLN6-218ENST00000637223 GSTCDQ8NEC7 633 aa18.75■□□□□ 0.59
CLN6-218ENST00000637223 ZSWIM2Q8NEG5 633 aa18.75■□□□□ 0.59
CLN6-218ENST00000637223 NOC3LQ8WTT2 800 aaKnown RBP18.75■□□□□ 0.59
CLN6-218ENST00000637223 TGS1Q96RS0 853 aaKnown RBP18.75■□□□□ 0.59
CLN6-218ENST00000637223 CWH43Q9H720 699 aa18.75■□□□□ 0.59
CLN6-218ENST00000637223 TOPORSQ9NS56 1045 aaPredicted RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms