RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 HSPBP1Q9NZL4 362 aa17.45■□□□□ 0.38
CLN6-216ENST00000636876 PARP2Q9UGN5 583 aa17.45■□□□□ 0.38
CLN6-216ENST00000636876 GIT1Q9Y2X7 761 aa17.45■□□□□ 0.38
CLN6-216ENST00000636876 CUL9Q8IWT3 2517 aa17.44■□□□□ 0.38
CLN6-216ENST00000636876 DGKIO75912 1065 aa17.44■□□□□ 0.38
CLN6-216ENST00000636876 CCNE1P24864 410 aa17.44■□□□□ 0.38
CLN6-216ENST00000636876 GATMP50440 423 aa17.44■□□□□ 0.38
CLN6-216ENST00000636876 CYP2J2P51589 502 aa17.44■□□□□ 0.38
CLN6-216ENST00000636876 HTRA4P83105 476 aaPredicted RBP17.44■□□□□ 0.38
CLN6-216ENST00000636876 NFIL3Q16649 462 aa17.44■□□□□ 0.38
CLN6-216ENST00000636876 DPCR1Q3MIW9 517 aa17.44■□□□□ 0.38
CLN6-216ENST00000636876 SASS6Q6UVJ0 657 aa17.44■□□□□ 0.38
CLN6-216ENST00000636876 GLB1LQ6UWU2 654 aa17.44■□□□□ 0.38
CLN6-216ENST00000636876 SLC9A9Q8IVB4 645 aa17.44■□□□□ 0.38
CLN6-216ENST00000636876 ZSWIM2Q8NEG5 633 aa17.44■□□□□ 0.38
CLN6-216ENST00000636876 HELQQ8TDG4 1101 aa17.44■□□□□ 0.38
CLN6-216ENST00000636876 TMEM174Q8WUU8 243 aa17.44■□□□□ 0.38
CLN6-216ENST00000636876 P2RX5Q93086 422 aa17.44■□□□□ 0.38
CLN6-216ENST00000636876 SAAL1Q96ER3 474 aa17.44■□□□□ 0.38
CLN6-216ENST00000636876 ACAP3Q96P50 834 aa17.44■□□□□ 0.38
CLN6-216ENST00000636876 RAD9AQ99638 391 aa17.44■□□□□ 0.38
CLN6-216ENST00000636876 TMEM117Q9H0C3 514 aa17.44■□□□□ 0.38
CLN6-216ENST00000636876 RC3H2Q9HBD1 1191 aaKnown RBP17.44■□□□□ 0.38
CLN6-216ENST00000636876 DMAC2Q9NW81 257 aa17.44■□□□□ 0.38
CLN6-216ENST00000636876 CHD9Q3L8U1 2897 aa17.44■□□□□ 0.38
CLN6-216ENST00000636876 COL4A6Q14031 1691 aa17.43■□□□□ 0.38
CLN6-216ENST00000636876 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.43■□□□□ 0.38
CLN6-216ENST00000636876 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.43■□□□□ 0.38
CLN6-216ENST00000636876 GRXCR1A8MXD5 290 aa17.43■□□□□ 0.38
CLN6-216ENST00000636876 INPPL1O15357 1258 aa17.43■□□□□ 0.38
CLN6-216ENST00000636876 TLL1O43897 1013 aa17.43■□□□□ 0.38
CLN6-216ENST00000636876 EXTL3O43909 919 aa17.43■□□□□ 0.38
CLN6-216ENST00000636876 OFD1O75665 1012 aa17.43■□□□□ 0.38
CLN6-216ENST00000636876 LETM1O95202 739 aaPredicted RBP17.43■□□□□ 0.38
CLN6-216ENST00000636876 LDHAP00338 332 aaKnown RBP17.43■□□□□ 0.38
CLN6-216ENST00000636876 NR3C1P04150 777 aa17.43■□□□□ 0.38
CLN6-216ENST00000636876 TNFSF9P41273 254 aa17.43■□□□□ 0.38
CLN6-216ENST00000636876 ACOT2P49753 483 aa17.43■□□□□ 0.38
CLN6-216ENST00000636876 YARSP54577 528 aaKnown RBP17.43■□□□□ 0.38
CLN6-216ENST00000636876 MYBPC2Q14324 1141 aa17.43■□□□□ 0.38
CLN6-216ENST00000636876 EDRF1Q3B7T1 1238 aa17.43■□□□□ 0.38
CLN6-216ENST00000636876 CRELD2Q6UXH1 353 aaPredicted RBP17.43■□□□□ 0.38
CLN6-216ENST00000636876 ABI1Q8IZP0 508 aa17.43■□□□□ 0.38
CLN6-216ENST00000636876 XXYLT1Q8NBI6 393 aa17.43■□□□□ 0.38
CLN6-216ENST00000636876 NELFBQ8WX92 580 aa17.43■□□□□ 0.38
CLN6-216ENST00000636876 RSPH1Q8WYR4 309 aa17.43■□□□□ 0.38
CLN6-216ENST00000636876 ZNF689Q96CS4 500 aaPredicted RBP17.43■□□□□ 0.38
CLN6-216ENST00000636876 CASD1Q96PB1 797 aa17.43■□□□□ 0.38
CLN6-216ENST00000636876 YME1L1Q96TA2 773 aa17.43■□□□□ 0.38
CLN6-216ENST00000636876 GAD1Q99259 594 aa17.43■□□□□ 0.38
CLN6-216ENST00000636876 TSG101Q99816 390 aa17.43■□□□□ 0.38
CLN6-216ENST00000636876 FAM213AQ9BRX8 229 aa17.43■□□□□ 0.38
CLN6-216ENST00000636876 TOPORSQ9NS56 1045 aaPredicted RBP17.43■□□□□ 0.38
CLN6-216ENST00000636876 KLK14Q9P0G3 267 aa17.43■□□□□ 0.38
CLN6-216ENST00000636876 CPSF3Q9UKF6 684 aaKnown RBP17.43■□□□□ 0.38
CLN6-216ENST00000636876 CTNND2Q9UQB3 1225 aa17.43■□□□□ 0.38
CLN6-216ENST00000636876 INSL6Q9Y581 213 aa17.43■□□□□ 0.38
CLN6-216ENST00000636876 CITO14578 2027 aa17.42■□□□□ 0.38
CLN6-216ENST00000636876 FNDC1Q4ZHG4 1894 aaPredicted RBP17.42■□□□□ 0.38
CLN6-216ENST00000636876 GOLGA8IPA6NC78 632 aa17.42■□□□□ 0.38
CLN6-216ENST00000636876 ARL5CA6NH57 179 aa17.42■□□□□ 0.38
CLN6-216ENST00000636876 GOLGA8JA6NMD2 632 aa17.42■□□□□ 0.38
CLN6-216ENST00000636876 TBKBP1A7MCY6 615 aa17.42■□□□□ 0.38
CLN6-216ENST00000636876 CXCL8P10145 99 aa17.42■□□□□ 0.38
CLN6-216ENST00000636876 MLH1P40692 756 aa17.42■□□□□ 0.38
CLN6-216ENST00000636876 RABGGTBP53611 331 aa17.42■□□□□ 0.38
CLN6-216ENST00000636876 PMS1P54277 932 aaKnown RBP17.42■□□□□ 0.38
CLN6-216ENST00000636876 POU5F1Q01860 360 aaKnown RBP17.42■□□□□ 0.38
CLN6-216ENST00000636876 LRRC63Q05C16 580 aa17.42■□□□□ 0.38
CLN6-216ENST00000636876 PAK1Q13153 545 aa17.42■□□□□ 0.38
CLN6-216ENST00000636876 HSP90AA2PQ14568 343 aaPredicted RBP17.42■□□□□ 0.38
CLN6-216ENST00000636876 ENOX2Q16206 610 aaKnown RBP17.42■□□□□ 0.38
CLN6-216ENST00000636876 STX1AQ16623 288 aa17.42■□□□□ 0.38
CLN6-216ENST00000636876 NOMO2Q5JPE7 1267 aa17.42■□□□□ 0.38
CLN6-216ENST00000636876 ANKRD40Q6AI12 368 aa17.42■□□□□ 0.38
CLN6-216ENST00000636876 CMTR2Q8IYT2 770 aaKnown RBP17.42■□□□□ 0.38
CLN6-216ENST00000636876 GPD1LQ8N335 351 aa17.42■□□□□ 0.38
CLN6-216ENST00000636876 SNX27Q96L92 541 aa17.42■□□□□ 0.38
CLN6-216ENST00000636876 FBXL18Q96ME1 805 aa17.42■□□□□ 0.38
CLN6-216ENST00000636876 ZFP42Q96MM3 310 aa17.42■□□□□ 0.38
CLN6-216ENST00000636876 RPF1Q9H9Y2 349 aaKnown RBP17.42■□□□□ 0.38
CLN6-216ENST00000636876 KIAA1586Q9HCI6 787 aa17.42■□□□□ 0.38
CLN6-216ENST00000636876 ANO10Q9NW15 660 aa17.42■□□□□ 0.38
CLN6-216ENST00000636876 DACH1Q9UI36 760 aa17.42■□□□□ 0.38
CLN6-216ENST00000636876 INPP5FQ9Y2H2 1132 aa17.42■□□□□ 0.38
CLN6-216ENST00000636876 PCDHA11Q9Y5I1 949 aa17.42■□□□□ 0.38
CLN6-216ENST00000636876 BICDL2A1A5D9 508 aa17.41■□□□□ 0.38
CLN6-216ENST00000636876 TRIM49BA6NDI0 452 aa17.41■□□□□ 0.38
CLN6-216ENST00000636876 MEFVO15553 781 aaPredicted RBP17.41■□□□□ 0.38
CLN6-216ENST00000636876 EXOC3O60645 756 aa17.41■□□□□ 0.38
CLN6-216ENST00000636876 NR2F2P24468 414 aa17.41■□□□□ 0.38
CLN6-216ENST00000636876 RPL13P26373 211 aaKnown RBP17.41■□□□□ 0.38
CLN6-216ENST00000636876 AFF1P51825 1210 aaKnown RBP17.41■□□□□ 0.38
CLN6-216ENST00000636876 TYRO3Q06418 890 aa17.41■□□□□ 0.38
CLN6-216ENST00000636876 SLC10A6Q3KNW5 377 aa17.41■□□□□ 0.38
CLN6-216ENST00000636876 PAN2Q504Q3 1202 aaKnown RBP17.41■□□□□ 0.38
CLN6-216ENST00000636876 XKR4Q5GH76 650 aa17.41■□□□□ 0.38
CLN6-216ENST00000636876 TTI2Q6NXR4 508 aa17.41■□□□□ 0.38
CLN6-216ENST00000636876 FOXR2Q6PJQ5 311 aa17.41■□□□□ 0.38
CLN6-216ENST00000636876 ALKAL1Q6UXT8 129 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms