RNA–Protein interactions for RNA: ENST00000636861.1

CHD2-225, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 146 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-225ENST00000636861 HGSO14964 777 aaPredicted RBP4.29□□□□□ -1.72
CHD2-225ENST00000636861 MAPK13O15264 365 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 RGS16O15492 202 aaPredicted RBP4.29□□□□□ -1.72
CHD2-225ENST00000636861 AKR1B10O60218 316 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 CLASP2O75122 1294 aaKnown RBP4.29□□□□□ -1.72
CHD2-225ENST00000636861 PEX11AO75192 247 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 ZMYND10O75800 440 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 CIB2O75838 187 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 GAS8O95995 478 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 OAS1P00973 400 aaKnown RBP4.29□□□□□ -1.72
CHD2-225ENST00000636861 GNRH1P01148 92 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 KRT6AP02538 564 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 KRT6BP04259 564 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 KRT16P08779 473 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 NUDT17P0C025 328 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 CHN1P15882 459 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 ZNF12P17014 697 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 GNAT2P19087 354 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 MARK3P27448 753 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 KRT2P35908 639 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 HSD17B3P37058 310 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 LIFRP42702 1097 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 MMP13P45452 471 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 PCYT1AP49585 367 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 COPB1P53618 953 aaKnown RBP4.29□□□□□ -1.72
CHD2-225ENST00000636861 CSE1LP55060 971 aaKnown RBP4.29□□□□□ -1.72
CHD2-225ENST00000636861 KCNJ2P63252 427 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 GRIN1Q05586 938 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 SLC34A1Q06495 639 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 ZNF844Q08AG5 666 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 TBL3Q12788 808 aaKnown RBP4.29□□□□□ -1.72
CHD2-225ENST00000636861 ASPHQ12797 758 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 STRN3Q13033 797 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 PAK1Q13153 545 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 NMIQ13287 307 aaPredicted RBP4.29□□□□□ -1.72
CHD2-225ENST00000636861 KIF22Q14807 665 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 SKIV2LQ15477 1246 aaKnown RBP4.29□□□□□ -1.72
CHD2-225ENST00000636861 TAF1CQ15572 869 aaPredicted RBP4.29□□□□□ -1.72
CHD2-225ENST00000636861 P3H1Q32P28 736 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 ZCWPW2Q504Y3 356 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 SOWAHCQ53LP3 525 aaPredicted RBP4.29□□□□□ -1.72
CHD2-225ENST00000636861 BEND3Q5T5X7 828 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 SYDE2Q5VT97 1194 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 TCERG1LQ5VWI1 586 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 FYB2Q5VWT5 728 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 OLFML2BQ68BL8 750 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 DENND2CQ68D51 928 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 LRRC74BQ6ZQY2 392 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 ARHGEF18Q6ZSZ5 1173 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 ACAD11Q709F0 780 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 MIER3Q7Z3K6 550 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 FRMD5Q7Z6J6 570 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 EXOC3L1Q86VI1 746 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 METTL16Q86W50 562 aaKnown RBP4.29□□□□□ -1.72
CHD2-225ENST00000636861 LONP2Q86WA8 852 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 DDX42Q86XP3 938 aaKnown RBP eCLIP4.29□□□□□ -1.72
CHD2-225ENST00000636861 WDR75Q8IWA0 830 aaKnown RBP4.29□□□□□ -1.72
CHD2-225ENST00000636861 SCUBE1Q8IWY4 988 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 CRIPAKQ8N1N5 446 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 TERB1Q8NA31 727 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 SPATA5Q8NB90 893 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 ADAM32Q8TC27 787 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 SPATA18Q8TC71 538 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 FNDC8Q8TC99 324 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 NEK9Q8TD19 979 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 SCFD1Q8WVM8 642 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 GATA6Q92908 595 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 NACC2Q96BF6 587 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 DGCR14Q96DF8 476 aaKnown RBP4.29□□□□□ -1.72
CHD2-225ENST00000636861 ANKRD36BP1Q96IX9 119 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 EPSTI1Q96J88 318 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 AGBL1Q96MI9 1066 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 ZNF317Q96PQ6 595 aaPredicted RBP4.29□□□□□ -1.72
CHD2-225ENST00000636861 ELAC2Q9BQ52 826 aaKnown RBP4.29□□□□□ -1.72
CHD2-225ENST00000636861 SPZ1Q9BXG8 430 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 PBX4Q9BYU1 374 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 IFIH1Q9BYX4 1025 aaKnown RBP4.29□□□□□ -1.72
CHD2-225ENST00000636861 ROPN1BQ9BZX4 212 aaPredicted RBP4.29□□□□□ -1.72
CHD2-225ENST00000636861 ASCC2Q9H1I8 757 aaPredicted RBP4.29□□□□□ -1.72
CHD2-225ENST00000636861 TMEM60Q9H2L4 133 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 C10orf88Q9H8K7 445 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 ROPN1Q9HAT0 212 aaPredicted RBP4.29□□□□□ -1.72
CHD2-225ENST00000636861 IL1RAPL2Q9NP60 686 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 PALMDQ9NP74 551 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 PIH1D3Q9NQM4 214 aaKnown RBP4.29□□□□□ -1.72
CHD2-225ENST00000636861 KCNQ5Q9NR82 932 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 FGFR1OP2Q9NVK5 253 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 NMRK1Q9NWW6 199 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 DDX43Q9NXZ2 648 aaKnown RBP4.29□□□□□ -1.72
CHD2-225ENST00000636861 C6orf203Q9P0P8 240 aaPredicted RBP4.29□□□□□ -1.72
CHD2-225ENST00000636861 HESX1Q9UBX0 185 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 MTRF1LQ9UGC7 380 aaKnown RBP4.29□□□□□ -1.72
CHD2-225ENST00000636861 DMGDHQ9UI17 866 aaKnown RBP4.29□□□□□ -1.72
CHD2-225ENST00000636861 RWDD2AQ9UIY3 292 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 RABL2BQ9UNT1 228 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 UTP11Q9Y3A2 253 aaKnown RBP4.29□□□□□ -1.72
CHD2-225ENST00000636861 FAM32AQ9Y421 112 aaKnown RBP4.29□□□□□ -1.72
CHD2-225ENST00000636861 GPC6Q9Y625 555 aaPredicted RBP4.29□□□□□ -1.72
CHD2-225ENST00000636861 SPEF2Q9C093 1822 aa4.29□□□□□ -1.72
CHD2-225ENST00000636861 FLT4P35916 1363 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms