RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 FAM205CA6NFA0 338 aa13.94□□□□□ -0.18
CTSD-208ENST00000636843 EFEMP2O95967 443 aa13.94□□□□□ -0.18
CTSD-208ENST00000636843 ARL2P36404 184 aa13.94□□□□□ -0.18
CTSD-208ENST00000636843 GLUD2P49448 558 aa13.94□□□□□ -0.18
CTSD-208ENST00000636843 MBTD1Q05BQ5 628 aa13.94□□□□□ -0.18
CTSD-208ENST00000636843 CALCRLQ16602 461 aa13.94□□□□□ -0.18
CTSD-208ENST00000636843 RBM43Q6ZSC3 357 aaKnown RBP13.94□□□□□ -0.18
CTSD-208ENST00000636843 RNF168Q8IYW5 571 aaPredicted RBP13.94□□□□□ -0.18
CTSD-208ENST00000636843 TMEM105Q8N8V8 129 aa13.94□□□□□ -0.18
CTSD-208ENST00000636843 KCNG4Q8TDN1 519 aa13.94□□□□□ -0.18
CTSD-208ENST00000636843 CPB2Q96IY4 423 aa13.94□□□□□ -0.18
CTSD-208ENST00000636843 COLEC11Q9BWP8 271 aa13.94□□□□□ -0.18
CTSD-208ENST00000636843 TRIM6Q9C030 488 aaPredicted RBP13.94□□□□□ -0.18
CTSD-208ENST00000636843 RNF39Q9H2S5 420 aa13.94□□□□□ -0.18
CTSD-208ENST00000636843 RXFP1Q9HBX9 757 aa13.94□□□□□ -0.18
CTSD-208ENST00000636843 MAN1C1Q9NR34 630 aa13.94□□□□□ -0.18
CTSD-208ENST00000636843 H0Y858 1186 aa13.93□□□□□ -0.18
CTSD-208ENST00000636843 C2CD2LO14523 706 aa13.93□□□□□ -0.18
CTSD-208ENST00000636843 TEX28O15482 410 aa13.93□□□□□ -0.18
CTSD-208ENST00000636843 GFRA3O60609 400 aa13.93□□□□□ -0.18
CTSD-208ENST00000636843 GLUD1P00367 558 aa13.93□□□□□ -0.18
CTSD-208ENST00000636843 C1RP00736 705 aa13.93□□□□□ -0.18
CTSD-208ENST00000636843 MLH1P40692 756 aa13.93□□□□□ -0.18
CTSD-208ENST00000636843 SCNN1GP51170 649 aa13.93□□□□□ -0.18
CTSD-208ENST00000636843 DSG1Q02413 1049 aa13.93□□□□□ -0.18
CTSD-208ENST00000636843 CEBPZQ03701 1054 aaKnown RBP13.93□□□□□ -0.18
CTSD-208ENST00000636843 TDGQ13569 410 aa13.93□□□□□ -0.18
CTSD-208ENST00000636843 CAPSQ13938 189 aa13.93□□□□□ -0.18
CTSD-208ENST00000636843 AMHR2Q16671 573 aa13.93□□□□□ -0.18
CTSD-208ENST00000636843 KIAA0319Q5VV43 1072 aa13.93□□□□□ -0.18
CTSD-208ENST00000636843 CCDC73Q6ZRK6 1079 aa13.93□□□□□ -0.18
CTSD-208ENST00000636843 TAS1R1Q7RTX1 841 aa13.93□□□□□ -0.18
CTSD-208ENST00000636843 GPR65Q8IYL9 337 aa13.93□□□□□ -0.18
CTSD-208ENST00000636843 FEZF2Q8TBJ5 459 aa13.93□□□□□ -0.18
CTSD-208ENST00000636843 ASAP3Q8TDY4 903 aa13.93□□□□□ -0.18
CTSD-208ENST00000636843 HDAC7Q8WUI4 952 aa13.93□□□□□ -0.18
CTSD-208ENST00000636843 CCDC43Q96MW1 224 aaKnown RBP13.93□□□□□ -0.18
CTSD-208ENST00000636843 TTC12Q9H892 705 aaPredicted RBP13.93□□□□□ -0.18
CTSD-208ENST00000636843 MIOSQ9NXC5 875 aa13.93□□□□□ -0.18
CTSD-208ENST00000636843 HES2Q9Y543 173 aa13.93□□□□□ -0.18
CTSD-208ENST00000636843 ZMYM2Q9UBW7 1377 aa13.92□□□□□ -0.18
CTSD-208ENST00000636843 CCDC195A0A1B0GUA6 201 aa13.92□□□□□ -0.18
CTSD-208ENST00000636843 A0A1W2PQ27 194 aa13.92□□□□□ -0.18
CTSD-208ENST00000636843 A0A1W2PQ64 194 aa13.92□□□□□ -0.18
CTSD-208ENST00000636843 A0A1W2PQD8 194 aa13.92□□□□□ -0.18
CTSD-208ENST00000636843 PROB1E7EW31 1015 aa13.92□□□□□ -0.18
CTSD-208ENST00000636843 NEMFO60524 1076 aa13.92□□□□□ -0.18
CTSD-208ENST00000636843 ARF4P18085 180 aaPredicted RBP13.92□□□□□ -0.18
CTSD-208ENST00000636843 STK38Q15208 465 aa13.92□□□□□ -0.18
CTSD-208ENST00000636843 HS1BP3Q53T59 392 aa13.92□□□□□ -0.18
CTSD-208ENST00000636843 ADALQ6DHV7 355 aa13.92□□□□□ -0.18
CTSD-208ENST00000636843 LINC00301Q8NCQ3 95 aa13.92□□□□□ -0.18
CTSD-208ENST00000636843 RNF214Q8ND24 703 aa13.92□□□□□ -0.18
CTSD-208ENST00000636843 STAMQ92783 540 aa13.92□□□□□ -0.18
CTSD-208ENST00000636843 ZFP42Q96MM3 310 aa13.92□□□□□ -0.18
CTSD-208ENST00000636843 KCNK12Q9HB15 430 aa13.92□□□□□ -0.18
CTSD-208ENST00000636843 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.92□□□□□ -0.18
CTSD-208ENST00000636843 IGSF9Q9P2J2 1179 aa13.92□□□□□ -0.18
CTSD-208ENST00000636843 DUSP12Q9UNI6 340 aa13.92□□□□□ -0.18
CTSD-208ENST00000636843 GLRA2P23416 452 aa13.91□□□□□ -0.18
CTSD-208ENST00000636843 U2AF2P26368 475 aaKnown RBP eCLIP13.91□□□□□ -0.18
CTSD-208ENST00000636843 TXKP42681 527 aa13.91□□□□□ -0.18
CTSD-208ENST00000636843 ME1P48163 572 aa13.91□□□□□ -0.18
CTSD-208ENST00000636843 RARRES1P49788 294 aa13.91□□□□□ -0.18
CTSD-208ENST00000636843 GNL2Q13823 731 aaKnown RBP13.91□□□□□ -0.18
CTSD-208ENST00000636843 SAFBQ15424 915 aaKnown RBP eCLIP13.91□□□□□ -0.18
CTSD-208ENST00000636843 SF3A1Q15459 793 aaKnown RBP13.91□□□□□ -0.18
CTSD-208ENST00000636843 SLC27A1Q6PCB7 646 aa13.91□□□□□ -0.18
CTSD-208ENST00000636843 MTMR9Q96QG7 549 aa13.91□□□□□ -0.18
CTSD-208ENST00000636843 APOL6Q9BWW8 343 aa13.91□□□□□ -0.18
CTSD-208ENST00000636843 NXF3Q9H4D5 531 aaKnown RBP13.91□□□□□ -0.18
CTSD-208ENST00000636843 PLEKHA4Q9H4M7 779 aa13.91□□□□□ -0.18
CTSD-208ENST00000636843 WDR6Q9NNW5 1121 aaKnown RBP13.91□□□□□ -0.18
CTSD-208ENST00000636843 CHST7Q9NS84 486 aa13.91□□□□□ -0.18
CTSD-208ENST00000636843 FNIP2Q9P278 1114 aa13.91□□□□□ -0.18
CTSD-208ENST00000636843 ZFHX2Q9C0A1 2572 aaPredicted RBP13.91□□□□□ -0.18
CTSD-208ENST00000636843 A0A1B0GUA9 196 aa13.9□□□□□ -0.18
CTSD-208ENST00000636843 BTBD18B2RXH4 712 aa13.9□□□□□ -0.18
CTSD-208ENST00000636843 SPTLC2O15270 562 aa13.9□□□□□ -0.18
CTSD-208ENST00000636843 PAPLNO95428 1278 aa13.9□□□□□ -0.18
CTSD-208ENST00000636843 FAM160A1Q05DH4 1040 aa13.9□□□□□ -0.18
CTSD-208ENST00000636843 USP41Q3LFD5 358 aa13.9□□□□□ -0.18
CTSD-208ENST00000636843 FUT10Q6P4F1 479 aa13.9□□□□□ -0.18
CTSD-208ENST00000636843 DIS3L2Q8IYB7 885 aaKnown RBP13.9□□□□□ -0.18
CTSD-208ENST00000636843 PIGOQ8TEQ8 1089 aa13.9□□□□□ -0.18
CTSD-208ENST00000636843 POLR3FQ9H1D9 316 aaPredicted RBP13.9□□□□□ -0.18
CTSD-208ENST00000636843 DENND4AQ7Z401 1863 aa13.9□□□□□ -0.18
CTSD-208ENST00000636843 PTPRZ1P23471 2315 aaPredicted RBP13.9□□□□□ -0.18
CTSD-208ENST00000636843 B4GALT5O43286 388 aa13.9□□□□□ -0.19
CTSD-208ENST00000636843 NPTXRO95502 500 aa13.9□□□□□ -0.19
CTSD-208ENST00000636843 CAVIN2O95810 425 aa13.9□□□□□ -0.19
CTSD-208ENST00000636843 AKAP5P24588 427 aa13.9□□□□□ -0.19
CTSD-208ENST00000636843 NBL1P41271 181 aa13.9□□□□□ -0.19
CTSD-208ENST00000636843 CREMQ03060 361 aa13.9□□□□□ -0.19
CTSD-208ENST00000636843 GRIK3Q13003 919 aa13.9□□□□□ -0.19
CTSD-208ENST00000636843 GSTCDQ8NEC7 633 aa13.9□□□□□ -0.19
CTSD-208ENST00000636843 MCPH1Q8NEM0 835 aa13.9□□□□□ -0.19
CTSD-208ENST00000636843 FLCNQ8NFG4 579 aa13.9□□□□□ -0.19
CTSD-208ENST00000636843 SMG7Q92540 1137 aaKnown RBP13.9□□□□□ -0.19
CTSD-208ENST00000636843 NXPE3Q969Y0 559 aa13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms