RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 CSF2RAP15509 400 aa11.61□□□□□ -0.55
CLN5-213ENST00000636681 CDK11BP21127 795 aaKnown RBP11.61□□□□□ -0.55
CLN5-213ENST00000636681 MTIF2P46199 727 aaKnown RBP11.61□□□□□ -0.55
CLN5-213ENST00000636681 APBA1Q02410 837 aa11.61□□□□□ -0.55
CLN5-213ENST00000636681 ENOX2Q16206 610 aaKnown RBP11.61□□□□□ -0.55
CLN5-213ENST00000636681 NFIL3Q16649 462 aa11.61□□□□□ -0.55
CLN5-213ENST00000636681 MIIPQ5JXC2 388 aa11.61□□□□□ -0.55
CLN5-213ENST00000636681 NOTUMQ6P988 496 aa11.61□□□□□ -0.55
CLN5-213ENST00000636681 SLC27A1Q6PCB7 646 aa11.61□□□□□ -0.55
CLN5-213ENST00000636681 CCDC127Q96BQ5 260 aa11.61□□□□□ -0.55
CLN5-213ENST00000636681 FAM212AQ96EL1 285 aa11.61□□□□□ -0.55
CLN5-213ENST00000636681 CEP63Q96MT8 703 aa11.61□□□□□ -0.55
CLN5-213ENST00000636681 IFNKQ9P0W0 207 aa11.61□□□□□ -0.55
CLN5-213ENST00000636681 ZMYND8Q9ULU4 1186 aaPredicted RBP11.61□□□□□ -0.55
CLN5-213ENST00000636681 IPPQ9Y573 584 aa11.61□□□□□ -0.55
CLN5-213ENST00000636681 N4BP3O15049 544 aa11.6□□□□□ -0.55
CLN5-213ENST00000636681 KIAA0355O15063 1070 aa11.6□□□□□ -0.55
CLN5-213ENST00000636681 GPR182O15218 404 aa11.6□□□□□ -0.55
CLN5-213ENST00000636681 EXTL3O43909 919 aa11.6□□□□□ -0.55
CLN5-213ENST00000636681 CAND2O75155 1236 aa11.6□□□□□ -0.55
CLN5-213ENST00000636681 ATF7P17544 494 aaPredicted RBP11.6□□□□□ -0.55
CLN5-213ENST00000636681 RPL13P26373 211 aaKnown RBP11.6□□□□□ -0.55
CLN5-213ENST00000636681 COPB1P53618 953 aaKnown RBP11.6□□□□□ -0.55
CLN5-213ENST00000636681 CYP24A1Q07973 514 aa11.6□□□□□ -0.55
CLN5-213ENST00000636681 PLEKHG4Q58EX7 1191 aa11.6□□□□□ -0.55
CLN5-213ENST00000636681 DCAF17Q5H9S7 520 aaPredicted RBP11.6□□□□□ -0.55
CLN5-213ENST00000636681 SLFN12LQ6IEE8 588 aa11.6□□□□□ -0.55
CLN5-213ENST00000636681 TMCO2Q7Z6W1 182 aaPredicted RBP11.6□□□□□ -0.55
CLN5-213ENST00000636681 TRIM59Q8IWR1 403 aa11.6□□□□□ -0.55
CLN5-213ENST00000636681 RNF169Q8NCN4 708 aa11.6□□□□□ -0.55
CLN5-213ENST00000636681 GOLGA5Q8TBA6 731 aa11.6□□□□□ -0.55
CLN5-213ENST00000636681 ZNF516Q92618 1163 aa11.6□□□□□ -0.55
CLN5-213ENST00000636681 TUBGCP2Q9BSJ2 902 aa11.6□□□□□ -0.55
CLN5-213ENST00000636681 XPO4Q9C0E2 1151 aaKnown RBP11.6□□□□□ -0.55
CLN5-213ENST00000636681 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.6□□□□□ -0.55
CLN5-213ENST00000636681 LIMA1Q9UHB6 759 aaKnown RBP11.6□□□□□ -0.55
CLN5-213ENST00000636681 CPSF3Q9UKF6 684 aaKnown RBP11.6□□□□□ -0.55
CLN5-213ENST00000636681 FNDC1Q4ZHG4 1894 aaPredicted RBP11.6□□□□□ -0.55
CLN5-213ENST00000636681 LRRIQ3A6PVS8 624 aaPredicted RBP11.59□□□□□ -0.55
CLN5-213ENST00000636681 LACTBL1A8MY62 500 aa11.59□□□□□ -0.55
CLN5-213ENST00000636681 TIMP1P01033 207 aa11.59□□□□□ -0.55
CLN5-213ENST00000636681 DLATP10515 647 aaKnown RBP11.59□□□□□ -0.55
CLN5-213ENST00000636681 MCF2P10911 925 aa11.59□□□□□ -0.55
CLN5-213ENST00000636681 EPB41P11171 864 aaKnown RBP11.59□□□□□ -0.55
CLN5-213ENST00000636681 PRKCSHP14314 528 aaPredicted RBP11.59□□□□□ -0.55
CLN5-213ENST00000636681 RAG1P15918 1043 aa11.59□□□□□ -0.55
CLN5-213ENST00000636681 PSMC2P35998 433 aaKnown RBP11.59□□□□□ -0.55
CLN5-213ENST00000636681 KLK7P49862 253 aa11.59□□□□□ -0.55
CLN5-213ENST00000636681 EPHB4P54760 987 aa11.59□□□□□ -0.55
CLN5-213ENST00000636681 PPP3CAQ08209 521 aa11.59□□□□□ -0.55
CLN5-213ENST00000636681 SLC10A6Q3KNW5 377 aa11.59□□□□□ -0.55
CLN5-213ENST00000636681 GLRA4Q5JXX5 417 aa11.59□□□□□ -0.55
CLN5-213ENST00000636681 TCERG1LQ5VWI1 586 aa11.59□□□□□ -0.55
CLN5-213ENST00000636681 FOXR2Q6PJQ5 311 aa11.59□□□□□ -0.55
CLN5-213ENST00000636681 SLC35C1Q96A29 364 aa11.59□□□□□ -0.55
CLN5-213ENST00000636681 MFSD14AQ96MC6 490 aa11.59□□□□□ -0.55
CLN5-213ENST00000636681 ZFP42Q96MM3 310 aa11.59□□□□□ -0.55
CLN5-213ENST00000636681 FAM105AQ9NUU6 356 aa11.59□□□□□ -0.55
CLN5-213ENST00000636681 RBAKQ9NYW8 714 aaPredicted RBP11.59□□□□□ -0.55
CLN5-213ENST00000636681 CACNG4Q9UBN1 327 aa11.59□□□□□ -0.55
CLN5-213ENST00000636681 ARMCX3Q9UH62 379 aaPredicted RBP11.59□□□□□ -0.55
CLN5-213ENST00000636681 FRMD4BQ9Y2L6 1034 aa11.59□□□□□ -0.55
CLN5-213ENST00000636681 PCDHB2Q9Y5E7 798 aa11.59□□□□□ -0.55
CLN5-213ENST00000636681 PES1O00541 588 aaKnown RBP11.59□□□□□ -0.55
CLN5-213ENST00000636681 RECQL4O94761 1208 aa11.59□□□□□ -0.55
CLN5-213ENST00000636681 SERPINC1P01008 464 aa11.59□□□□□ -0.55
CLN5-213ENST00000636681 SCP2P22307 547 aa11.59□□□□□ -0.55
CLN5-213ENST00000636681 ABCD1P33897 745 aa11.59□□□□□ -0.55
CLN5-213ENST00000636681 GATMP50440 423 aa11.59□□□□□ -0.55
CLN5-213ENST00000636681 GUCY2FP51841 1108 aa11.59□□□□□ -0.55
CLN5-213ENST00000636681 SNRPFP62306 86 aaKnown RBP11.59□□□□□ -0.55
CLN5-213ENST00000636681 CBWD6Q4V339 395 aa11.59□□□□□ -0.55
CLN5-213ENST00000636681 CBWD3Q5JTY5 395 aa11.59□□□□□ -0.55
CLN5-213ENST00000636681 CBWD5Q5RIA9 395 aa11.59□□□□□ -0.55
CLN5-213ENST00000636681 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.59□□□□□ -0.55
CLN5-213ENST00000636681 C16orf59Q7L2K0 433 aa11.59□□□□□ -0.55
CLN5-213ENST00000636681 EFCAB13Q8IY85 973 aa11.59□□□□□ -0.55
CLN5-213ENST00000636681 OR5B17Q8NGF7 314 aa11.59□□□□□ -0.55
CLN5-213ENST00000636681 PARD3BQ8TEW8 1205 aa11.59□□□□□ -0.55
CLN5-213ENST00000636681 BADQ92934 168 aa11.59□□□□□ -0.55
CLN5-213ENST00000636681 ZMAT2Q96NC0 199 aaKnown RBP11.59□□□□□ -0.55
CLN5-213ENST00000636681 ADPGKQ9BRR6 497 aa11.59□□□□□ -0.55
CLN5-213ENST00000636681 MIOSQ9NXC5 875 aa11.59□□□□□ -0.55
CLN5-213ENST00000636681 CGNQ9P2M7 1197 aaKnown RBP11.59□□□□□ -0.55
CLN5-213ENST00000636681 PLAGL2Q9UPG8 496 aa11.59□□□□□ -0.55
CLN5-213ENST00000636681 CHD9Q3L8U1 2897 aa11.58□□□□□ -0.56
CLN5-213ENST00000636681 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.58□□□□□ -0.56
CLN5-213ENST00000636681 ZNF233A6NK53 670 aa11.58□□□□□ -0.56
CLN5-213ENST00000636681 ENPP3O14638 875 aa11.58□□□□□ -0.56
CLN5-213ENST00000636681 SLC16A3O15427 465 aaKnown RBP11.58□□□□□ -0.56
CLN5-213ENST00000636681 CXCL10P02778 98 aa11.58□□□□□ -0.56
CLN5-213ENST00000636681 RPLP2P05387 115 aaKnown RBP11.58□□□□□ -0.56
CLN5-213ENST00000636681 NFICP08651 508 aa11.58□□□□□ -0.56
CLN5-213ENST00000636681 IGFBP6P24592 240 aaPredicted RBP11.58□□□□□ -0.56
CLN5-213ENST00000636681 EEF1GP26641 437 aaKnown RBP11.58□□□□□ -0.56
CLN5-213ENST00000636681 AXLP30530 894 aa11.58□□□□□ -0.56
CLN5-213ENST00000636681 GRM5P41594 1212 aa11.58□□□□□ -0.56
CLN5-213ENST00000636681 GCLMP48507 274 aa11.58□□□□□ -0.56
CLN5-213ENST00000636681 VAMP7P51809 220 aa11.58□□□□□ -0.56
CLN5-213ENST00000636681 MARSP56192 900 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms