RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 SCNN1GP51170 649 aa16.13■□□□□ 0.17
CDC42BPB-209ENST00000634889 CASP5P51878 434 aa16.13■□□□□ 0.17
CDC42BPB-209ENST00000634889 YARSP54577 528 aaKnown RBP16.13■□□□□ 0.17
CDC42BPB-209ENST00000634889 BCAR1P56945 870 aa16.13■□□□□ 0.17
CDC42BPB-209ENST00000634889 UBE3AQ05086 875 aa16.13■□□□□ 0.17
CDC42BPB-209ENST00000634889 GRIK3Q13003 919 aa16.13■□□□□ 0.17
CDC42BPB-209ENST00000634889 FAM26FQ5R3K3 315 aa16.13■□□□□ 0.17
CDC42BPB-209ENST00000634889 SLFN12LQ6IEE8 588 aa16.13■□□□□ 0.17
CDC42BPB-209ENST00000634889 THNSL1Q8IYQ7 743 aa16.13■□□□□ 0.17
CDC42BPB-209ENST00000634889 KLHL23Q8NBE8 558 aa16.13■□□□□ 0.17
CDC42BPB-209ENST00000634889 GSTCDQ8NEC7 633 aa16.13■□□□□ 0.17
CDC42BPB-209ENST00000634889 ZBTB45Q96K62 511 aaPredicted RBP16.13■□□□□ 0.17
CDC42BPB-209ENST00000634889 FAM193BQ96PV7 902 aaPredicted RBP16.13■□□□□ 0.17
CDC42BPB-209ENST00000634889 TMEM175Q9BSA9 504 aa16.13■□□□□ 0.17
CDC42BPB-209ENST00000634889 NRDE2Q9H7Z3 1164 aa16.13■□□□□ 0.17
CDC42BPB-209ENST00000634889 TMEM206Q9H813 350 aa16.13■□□□□ 0.17
CDC42BPB-209ENST00000634889 GDAQ9Y2T3 454 aa16.13■□□□□ 0.17
CDC42BPB-209ENST00000634889 STYXL1Q9Y6J8 313 aa16.13■□□□□ 0.17
CDC42BPB-209ENST00000634889 PLXNA4Q9HCM2 1894 aa16.13■□□□□ 0.17
CDC42BPB-209ENST00000634889 EYSQ5T1H1 3165 aa16.12■□□□□ 0.17
CDC42BPB-209ENST00000634889 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.12■□□□□ 0.17
CDC42BPB-209ENST00000634889 A0A0B4J269 797 aa16.12■□□□□ 0.17
CDC42BPB-209ENST00000634889 FGF18O76093 207 aa16.12■□□□□ 0.17
CDC42BPB-209ENST00000634889 ITGB1P05556 798 aa16.12■□□□□ 0.17
CDC42BPB-209ENST00000634889 IGFBP4P22692 258 aa16.12■□□□□ 0.17
CDC42BPB-209ENST00000634889 MATR3P43243 847 aaKnown RBP eCLIP16.12■□□□□ 0.17
CDC42BPB-209ENST00000634889 PLCB3Q01970 1234 aa16.12■□□□□ 0.17
CDC42BPB-209ENST00000634889 DSC1Q08554 894 aa16.12■□□□□ 0.17
CDC42BPB-209ENST00000634889 SNW1Q13573 536 aaKnown RBP16.12■□□□□ 0.17
CDC42BPB-209ENST00000634889 SLC39A4Q6P5W5 647 aa16.12■□□□□ 0.17
CDC42BPB-209ENST00000634889 CLEC17AQ6ZS10 378 aa16.12■□□□□ 0.17
CDC42BPB-209ENST00000634889 ZNF280BQ86YH2 543 aa16.12■□□□□ 0.17
CDC42BPB-209ENST00000634889 SLC39A11Q8N1S5 342 aa16.12■□□□□ 0.17
CDC42BPB-209ENST00000634889 CEP120Q8N960 986 aa16.12■□□□□ 0.17
CDC42BPB-209ENST00000634889 ENGASEQ8NFI3 743 aa16.12■□□□□ 0.17
CDC42BPB-209ENST00000634889 MRPL38Q96DV4 380 aaKnown RBP16.12■□□□□ 0.17
CDC42BPB-209ENST00000634889 ACAP3Q96P50 834 aa16.12■□□□□ 0.17
CDC42BPB-209ENST00000634889 FGFBP2Q9BYJ0 223 aa16.12■□□□□ 0.17
CDC42BPB-209ENST00000634889 SPG21Q9NZD8 308 aa16.12■□□□□ 0.17
CDC42BPB-209ENST00000634889 KLK14Q9P0G3 267 aa16.12■□□□□ 0.17
CDC42BPB-209ENST00000634889 LZTS1Q9Y250 596 aa16.12■□□□□ 0.17
CDC42BPB-209ENST00000634889 MTCH2Q9Y6C9 303 aa16.12■□□□□ 0.17
CDC42BPB-209ENST00000634889 UBE4BO95155 1302 aa16.12■□□□□ 0.17
CDC42BPB-209ENST00000634889 COL6A3P12111 3177 aa16.11■□□□□ 0.17
CDC42BPB-209ENST00000634889 PTGESO14684 152 aa16.11■□□□□ 0.17
CDC42BPB-209ENST00000634889 OGTO15294 1046 aa16.11■□□□□ 0.17
CDC42BPB-209ENST00000634889 GRM6O15303 877 aa16.11■□□□□ 0.17
CDC42BPB-209ENST00000634889 KLRC4O43908 158 aa16.11■□□□□ 0.17
CDC42BPB-209ENST00000634889 FAM189A1O60320 539 aa16.11■□□□□ 0.17
CDC42BPB-209ENST00000634889 DDHD2O94830 711 aa16.11■□□□□ 0.17
CDC42BPB-209ENST00000634889 SLC34A2O95436 690 aa16.11■□□□□ 0.17
CDC42BPB-209ENST00000634889 GALTP07902 379 aa16.11■□□□□ 0.17
CDC42BPB-209ENST00000634889 HARSP12081 509 aaKnown RBP16.11■□□□□ 0.17
CDC42BPB-209ENST00000634889 KRT17Q04695 432 aa16.11■□□□□ 0.17
CDC42BPB-209ENST00000634889 KCNA1Q09470 495 aa16.11■□□□□ 0.17
CDC42BPB-209ENST00000634889 PSMD2Q13200 908 aa16.11■□□□□ 0.17
CDC42BPB-209ENST00000634889 POSTNQ15063 836 aa16.11■□□□□ 0.17
CDC42BPB-209ENST00000634889 XKR4Q5GH76 650 aa16.11■□□□□ 0.17
CDC42BPB-209ENST00000634889 ALKAL1Q6UXT8 129 aa16.11■□□□□ 0.17
CDC42BPB-209ENST00000634889 EPM2AIP1Q7L775 607 aaPredicted RBP16.11■□□□□ 0.17
CDC42BPB-209ENST00000634889 COLGALT2Q8IYK4 626 aa16.11■□□□□ 0.17
CDC42BPB-209ENST00000634889 SPPL3Q8TCT6 385 aa16.11■□□□□ 0.17
CDC42BPB-209ENST00000634889 HPS3Q969F9 1004 aa16.11■□□□□ 0.17
CDC42BPB-209ENST00000634889 SNX27Q96L92 541 aa16.11■□□□□ 0.17
CDC42BPB-209ENST00000634889 TIGD1Q96MW7 591 aa16.11■□□□□ 0.17
CDC42BPB-209ENST00000634889 MSTO1Q9BUK6 570 aa16.11■□□□□ 0.17
CDC42BPB-209ENST00000634889 HAPLN2Q9GZV7 340 aa16.11■□□□□ 0.17
CDC42BPB-209ENST00000634889 GBP3Q9H0R5 595 aa16.11■□□□□ 0.17
CDC42BPB-209ENST00000634889 EXOC1Q9NV70 894 aa16.11■□□□□ 0.17
CDC42BPB-209ENST00000634889 MIOSQ9NXC5 875 aa16.11■□□□□ 0.17
CDC42BPB-209ENST00000634889 DNAJB4Q9UDY4 337 aa16.11■□□□□ 0.17
CDC42BPB-209ENST00000634889 STK39Q9UEW8 545 aa16.11■□□□□ 0.17
CDC42BPB-209ENST00000634889 ANKRD63C9JTQ0 380 aa16.1■□□□□ 0.17
CDC42BPB-209ENST00000634889 B4GALT3O60512 393 aa16.1■□□□□ 0.17
CDC42BPB-209ENST00000634889 NR1I2O75469 434 aa16.1■□□□□ 0.17
CDC42BPB-209ENST00000634889 RPN1P04843 607 aaKnown RBP16.1■□□□□ 0.17
CDC42BPB-209ENST00000634889 THP07101 528 aa16.1■□□□□ 0.17
CDC42BPB-209ENST00000634889 CLTAP09496 248 aa16.1■□□□□ 0.17
CDC42BPB-209ENST00000634889 PBX3P40426 434 aa16.1■□□□□ 0.17
CDC42BPB-209ENST00000634889 SLC11A1P49279 550 aa16.1■□□□□ 0.17
CDC42BPB-209ENST00000634889 OSTNP61366 133 aa16.1■□□□□ 0.17
CDC42BPB-209ENST00000634889 DPYDQ12882 1025 aa16.1■□□□□ 0.17
CDC42BPB-209ENST00000634889 KMT5BQ4FZB7 885 aa16.1■□□□□ 0.17
CDC42BPB-209ENST00000634889 SYCP3Q8IZU3 236 aa16.1■□□□□ 0.17
CDC42BPB-209ENST00000634889 ZNF507Q8TCN5 953 aa16.1■□□□□ 0.17
CDC42BPB-209ENST00000634889 CCDC47Q96A33 483 aaKnown RBP16.1■□□□□ 0.17
CDC42BPB-209ENST00000634889 PLEKHA5Q9HAU0 1116 aa16.1■□□□□ 0.17
CDC42BPB-209ENST00000634889 ALG13Q9NP73 1137 aaKnown RBP16.1■□□□□ 0.17
CDC42BPB-209ENST00000634889 CNTN3Q9P232 1028 aa16.1■□□□□ 0.17
CDC42BPB-209ENST00000634889 PUF60Q9UHX1 559 aaKnown RBP16.1■□□□□ 0.17
CDC42BPB-209ENST00000634889 HOOK1Q9UJC3 728 aaKnown RBP16.1■□□□□ 0.17
CDC42BPB-209ENST00000634889 REV3LO60673 3130 aa16.1■□□□□ 0.17
CDC42BPB-209ENST00000634889 CITO14578 2027 aa16.1■□□□□ 0.17
CDC42BPB-209ENST00000634889 ATG2AQ2TAZ0 1938 aa16.09■□□□□ 0.17
CDC42BPB-209ENST00000634889 PRPF6O94906 941 aaKnown RBP16.09■□□□□ 0.17
CDC42BPB-209ENST00000634889 ALDH2P05091 517 aa16.09■□□□□ 0.17
CDC42BPB-209ENST00000634889 PRR29P0C7W0 189 aa16.09■□□□□ 0.17
CDC42BPB-209ENST00000634889 KCNE1P15382 129 aa16.09■□□□□ 0.17
CDC42BPB-209ENST00000634889 GARTP22102 1010 aa16.09■□□□□ 0.17
CDC42BPB-209ENST00000634889 UBE2HP62256 183 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms