RNA–Protein interactions for RNA: ENST00000634348.1

SRSF4-208, Transcript of serine and arginine rich splicing factor 4, human

TSL 5

Gene SRSF4, Length 8,128 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRSF4-208	ENST00000634348	CEP170P1	Q96L14	293 aa		11.97	□□□□□ -0.49
SRSF4-208	ENST00000634348	STK25	O00506	426 aa		11.97	□□□□□ -0.49
SRSF4-208	ENST00000634348	HOXA13	P31271	388 aa	Predicted RBP	11.97	□□□□□ -0.49
SRSF4-208	ENST00000634348	PPP2R5B	Q15173	497 aa		11.97	□□□□□ -0.49
SRSF4-208	ENST00000634348	ZNF579	Q8NAF0	562 aa	Known RBP	11.97	□□□□□ -0.49
SRSF4-208	ENST00000634348	AIFM3	Q96NN9	605 aa		11.97	□□□□□ -0.49
SRSF4-208	ENST00000634348	WWP1	Q9H0M0	922 aa		11.97	□□□□□ -0.49
SRSF4-208	ENST00000634348	DBNDD1	Q9H9R9	158 aa		11.97	□□□□□ -0.49
SRSF4-208	ENST00000634348	CCDC195	A0A1B0GUA6	201 aa		11.97	□□□□□ -0.49
SRSF4-208	ENST00000634348		F8VZ95	297 aa		11.97	□□□□□ -0.49
SRSF4-208	ENST00000634348	ALDH1B1	P30837	517 aa		11.97	□□□□□ -0.49
SRSF4-208	ENST00000634348	C21orf59	P57076	290 aa		11.97	□□□□□ -0.49
SRSF4-208	ENST00000634348	ARF3	P61204	181 aa	Predicted RBP	11.97	□□□□□ -0.49
SRSF4-208	ENST00000634348	ARF1	P84077	181 aa	Known RBP	11.97	□□□□□ -0.49
SRSF4-208	ENST00000634348	FASTKD1	Q53R41	847 aa	Known RBP	11.97	□□□□□ -0.49
SRSF4-208	ENST00000634348	PPP1R14A	Q96A00	147 aa		11.97	□□□□□ -0.49
SRSF4-208	ENST00000634348	C7orf25	Q9BPX7	421 aa		11.97	□□□□□ -0.49
SRSF4-208	ENST00000634348	CUEDC2	Q9H467	287 aa		11.97	□□□□□ -0.49
SRSF4-208	ENST00000634348	SLITRK6	Q9H5Y7	841 aa		11.97	□□□□□ -0.49
SRSF4-208	ENST00000634348	CHL1	O00533	1208 aa		11.97	□□□□□ -0.49
SRSF4-208	ENST00000634348	PI16	Q6UXB8	463 aa		11.97	□□□□□ -0.49
SRSF4-208	ENST00000634348	TBC1D22A	Q8WUA7	517 aa		11.97	□□□□□ -0.49
SRSF4-208	ENST00000634348	SERHL2	Q9H4I8	314 aa		11.97	□□□□□ -0.49
SRSF4-208	ENST00000634348	SERHL	Q9NQF3	203 aa		11.97	□□□□□ -0.49
SRSF4-208	ENST00000634348	CACNA2D2	Q9NY47	1150 aa		11.97	□□□□□ -0.49
SRSF4-208	ENST00000634348	PRKAB2	O43741	272 aa		11.96	□□□□□ -0.49
SRSF4-208	ENST00000634348	USP1	O94782	785 aa		11.96	□□□□□ -0.49
SRSF4-208	ENST00000634348	PAIP1	Q9H074	479 aa	Known RBP	11.96	□□□□□ -0.49
SRSF4-208	ENST00000634348	EML4	Q9HC35	981 aa	Known RBP	11.96	□□□□□ -0.49
SRSF4-208	ENST00000634348	UHRF1BP1L	A0JNW5	1464 aa		11.96	□□□□□ -0.49
SRSF4-208	ENST00000634348	ATF4	P18848	351 aa	Predicted RBP	11.96	□□□□□ -0.49
SRSF4-208	ENST00000634348	PIK3R1	P27986	724 aa		11.96	□□□□□ -0.49
SRSF4-208	ENST00000634348	STAR	P49675	285 aa		11.96	□□□□□ -0.49
SRSF4-208	ENST00000634348	KDSR	Q06136	332 aa		11.96	□□□□□ -0.49
SRSF4-208	ENST00000634348	TRAP1	Q12931	704 aa	Known RBP	11.96	□□□□□ -0.49
SRSF4-208	ENST00000634348	NEK10	Q6ZWH5	1172 aa		11.96	□□□□□ -0.49
SRSF4-208	ENST00000634348	BNIPL	Q7Z465	357 aa		11.96	□□□□□ -0.49
SRSF4-208	ENST00000634348	TBCK	Q8TEA7	893 aa		11.96	□□□□□ -0.49
SRSF4-208	ENST00000634348	MIEF2	Q96C03	454 aa		11.96	□□□□□ -0.49
SRSF4-208	ENST00000634348	RMDN1	Q96DB5	314 aa		11.96	□□□□□ -0.49
SRSF4-208	ENST00000634348	ZFAT	Q9P243	1243 aa		11.96	□□□□□ -0.49
SRSF4-208	ENST00000634348	SRGAP2	O75044	1071 aa		11.96	□□□□□ -0.49
SRSF4-208	ENST00000634348	ZNF806	P0C7X5	589 aa		11.96	□□□□□ -0.49
SRSF4-208	ENST00000634348	TSHZ1	Q6ZSZ6	1077 aa		11.96	□□□□□ -0.49
SRSF4-208	ENST00000634348	GSPT2	Q8IYD1	628 aa	Known RBP	11.96	□□□□□ -0.49
SRSF4-208	ENST00000634348	ZNF786	Q8N393	782 aa		11.96	□□□□□ -0.49
SRSF4-208	ENST00000634348	MRPL1	Q9BYD6	325 aa	Known RBP	11.96	□□□□□ -0.49
SRSF4-208	ENST00000634348	ANAPC7	Q9UJX3	599 aa		11.96	□□□□□ -0.49
SRSF4-208	ENST00000634348	ANGPT2	O15123	496 aa		11.96	□□□□□ -0.49
SRSF4-208	ENST00000634348	PFKFB2	O60825	505 aa		11.96	□□□□□ -0.49
SRSF4-208	ENST00000634348	MED26	O95402	600 aa		11.96	□□□□□ -0.49
SRSF4-208	ENST00000634348	BCL10	O95999	233 aa		11.96	□□□□□ -0.49
SRSF4-208	ENST00000634348	EIF4A3	P38919	411 aa	Known RBP	11.96	□□□□□ -0.49
SRSF4-208	ENST00000634348	KLHL38	Q2WGJ6	581 aa		11.96	□□□□□ -0.49
SRSF4-208	ENST00000634348	DNAJC24	Q6P3W2	148 aa		11.96	□□□□□ -0.49
SRSF4-208	ENST00000634348	UBA2	Q9UBT2	640 aa	Predicted RBP	11.96	□□□□□ -0.49
SRSF4-208	ENST00000634348	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	11.96	□□□□□ -0.49
SRSF4-208	ENST00000634348	TYW5	A2RUC4	315 aa	Known RBP	11.96	□□□□□ -0.5
SRSF4-208	ENST00000634348	MYO1G	B0I1T2	1018 aa		11.96	□□□□□ -0.5
SRSF4-208	ENST00000634348	MAPKAPK2	P49137	400 aa		11.96	□□□□□ -0.5
SRSF4-208	ENST00000634348	KCTD21	Q4G0X4	260 aa		11.96	□□□□□ -0.5
SRSF4-208	ENST00000634348	CNDP1	Q96KN2	507 aa		11.96	□□□□□ -0.5
SRSF4-208	ENST00000634348	HEXIM2	Q96MH2	286 aa	Known RBP	11.96	□□□□□ -0.5
SRSF4-208	ENST00000634348	HEMGN	Q9BXL5	484 aa		11.96	□□□□□ -0.5
SRSF4-208	ENST00000634348	AS3MT	Q9HBK9	375 aa		11.96	□□□□□ -0.5
SRSF4-208	ENST00000634348	LRRC4	Q9HBW1	653 aa		11.96	□□□□□ -0.5
SRSF4-208	ENST00000634348	ADCY9	O60503	1353 aa		11.96	□□□□□ -0.5
SRSF4-208	ENST00000634348	PNMA8C	A0A1B0GUJ8	204 aa		11.96	□□□□□ -0.5
SRSF4-208	ENST00000634348		M0R2C6	588 aa		11.96	□□□□□ -0.5
SRSF4-208	ENST00000634348	BPIFB4	P59827	614 aa		11.96	□□□□□ -0.5
SRSF4-208	ENST00000634348	EIF4A1	P60842	406 aa	Known RBP	11.96	□□□□□ -0.5
SRSF4-208	ENST00000634348	CAV1	Q03135	178 aa		11.96	□□□□□ -0.5
SRSF4-208	ENST00000634348	NCF4	Q15080	339 aa		11.96	□□□□□ -0.5
SRSF4-208	ENST00000634348	KRT31	Q15323	416 aa		11.96	□□□□□ -0.5
SRSF4-208	ENST00000634348	CC2D1A	Q6P1N0	951 aa	Predicted RBP	11.96	□□□□□ -0.5
SRSF4-208	ENST00000634348	PSMC2	P35998	433 aa	Known RBP	11.95	□□□□□ -0.5
SRSF4-208	ENST00000634348	CSE1L	P55060	971 aa	Known RBP	11.95	□□□□□ -0.5
SRSF4-208	ENST00000634348	OCLN	Q16625	522 aa		11.95	□□□□□ -0.5
SRSF4-208	ENST00000634348	PGBD2	Q6P3X8	592 aa		11.95	□□□□□ -0.5
SRSF4-208	ENST00000634348	ZNF589	Q86UQ0	364 aa	Predicted RBP	11.95	□□□□□ -0.5
SRSF4-208	ENST00000634348	ZSWIM6	Q9HCJ5	1215 aa		11.95	□□□□□ -0.5
SRSF4-208	ENST00000634348	SARS2	Q9NP81	518 aa	Known RBP	11.95	□□□□□ -0.5
SRSF4-208	ENST00000634348	NRBP2	Q9NSY0	501 aa		11.95	□□□□□ -0.5
SRSF4-208	ENST00000634348	TTC7A	Q9ULT0	858 aa	Predicted RBP	11.95	□□□□□ -0.5
SRSF4-208	ENST00000634348	C1orf232	A0A0U1RR37	186 aa		11.95	□□□□□ -0.5
SRSF4-208	ENST00000634348	CLPTM1	O96005	669 aa		11.95	□□□□□ -0.5
SRSF4-208	ENST00000634348	MAGEA2	P43356	314 aa		11.95	□□□□□ -0.5
SRSF4-208	ENST00000634348	AASDH	Q4L235	1098 aa	Predicted RBP	11.95	□□□□□ -0.5
SRSF4-208	ENST00000634348	CNPY3	Q9BT09	278 aa		11.95	□□□□□ -0.5
SRSF4-208	ENST00000634348	CHID1	Q9BWS9	393 aa		11.95	□□□□□ -0.5
SRSF4-208	ENST00000634348	CASP1	P29466	404 aa		11.95	□□□□□ -0.5
SRSF4-208	ENST00000634348	ARID5B	Q14865	1188 aa		11.95	□□□□□ -0.5
SRSF4-208	ENST00000634348	SARM1	Q6SZW1	724 aa		11.95	□□□□□ -0.5
SRSF4-208	ENST00000634348	SPATA21	Q7Z572	469 aa		11.95	□□□□□ -0.5
SRSF4-208	ENST00000634348	POLN	Q7Z5Q5	900 aa		11.95	□□□□□ -0.5
SRSF4-208	ENST00000634348	SLC7A3	Q8WY07	619 aa		11.95	□□□□□ -0.5
SRSF4-208	ENST00000634348	ARL8A	Q96BM9	186 aa		11.95	□□□□□ -0.5
SRSF4-208	ENST00000634348	PRDM5	Q9NQX1	630 aa	Predicted RBP	11.95	□□□□□ -0.5
SRSF4-208	ENST00000634348	STMND1	H3BQB6	276 aa		11.95	□□□□□ -0.5
SRSF4-208	ENST00000634348	LBR	Q14739	615 aa	Known RBP	11.95	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms