RNA–Protein interactions for RNA: ENST00000629343.2

TCF4-267, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-267	ENST00000629343	ACAP3	Q96P50	834 aa		10.82	□□□□□ -0.68
TCF4-267	ENST00000629343	TRIM6	Q9C030	488 aa	Predicted RBP	10.82	□□□□□ -0.68
TCF4-267	ENST00000629343	GBP3	Q9H0R5	595 aa		10.82	□□□□□ -0.68
TCF4-267	ENST00000629343	CLSTN2	Q9H4D0	955 aa		10.82	□□□□□ -0.68
TCF4-267	ENST00000629343	ZNF576	Q9H609	170 aa		10.82	□□□□□ -0.68
TCF4-267	ENST00000629343	RSAD1	Q9HA92	442 aa		10.82	□□□□□ -0.68
TCF4-267	ENST00000629343	SLC28A3	Q9HAS3	691 aa		10.82	□□□□□ -0.68
TCF4-267	ENST00000629343	TBC1D13	Q9NVG8	400 aa		10.82	□□□□□ -0.68
TCF4-267	ENST00000629343	DMAC2	Q9NW81	257 aa		10.82	□□□□□ -0.68
TCF4-267	ENST00000629343	KANSL3	Q9P2N6	904 aa		10.82	□□□□□ -0.68
TCF4-267	ENST00000629343	PARP2	Q9UGN5	583 aa		10.82	□□□□□ -0.68
TCF4-267	ENST00000629343	CPSF3	Q9UKF6	684 aa	Known RBP	10.82	□□□□□ -0.68
TCF4-267	ENST00000629343	MRPL42	Q9Y6G3	142 aa	Known RBP	10.82	□□□□□ -0.68
TCF4-267	ENST00000629343	SMIM28	A0A1B0GU29	152 aa		10.81	□□□□□ -0.68
TCF4-267	ENST00000629343	TTC26	A0AVF1	554 aa		10.81	□□□□□ -0.68
TCF4-267	ENST00000629343	PPP1R3G	B7ZBB8	358 aa		10.81	□□□□□ -0.68
TCF4-267	ENST00000629343	GOLGA6L22	H0YM25	854 aa		10.81	□□□□□ -0.68
TCF4-267	ENST00000629343	PTGES	O14684	152 aa		10.81	□□□□□ -0.68
TCF4-267	ENST00000629343	HNRNPDL	O14979	420 aa	Known RBP	10.81	□□□□□ -0.68
TCF4-267	ENST00000629343	OGT	O15294	1046 aa		10.81	□□□□□ -0.68
TCF4-267	ENST00000629343	B4GALT3	O60512	393 aa		10.81	□□□□□ -0.68
TCF4-267	ENST00000629343	RECQL4	O94761	1208 aa		10.81	□□□□□ -0.68
TCF4-267	ENST00000629343	KCNE1	P15382	129 aa		10.81	□□□□□ -0.68
TCF4-267	ENST00000629343	TNFSF9	P41273	254 aa		10.81	□□□□□ -0.68
TCF4-267	ENST00000629343	PRCP	P42785	496 aa		10.81	□□□□□ -0.68
TCF4-267	ENST00000629343	OSTN	P61366	133 aa		10.81	□□□□□ -0.68
TCF4-267	ENST00000629343	MORC3	Q14149	939 aa		10.81	□□□□□ -0.68
TCF4-267	ENST00000629343	NOLC1	Q14978	699 aa	Known RBP eCLIP	10.81	□□□□□ -0.68
TCF4-267	ENST00000629343	NAB2	Q15742	525 aa		10.81	□□□□□ -0.68
TCF4-267	ENST00000629343	ZBTB6	Q15916	424 aa		10.81	□□□□□ -0.68
TCF4-267	ENST00000629343	ZNF568	Q3ZCX4	644 aa		10.81	□□□□□ -0.68
TCF4-267	ENST00000629343	PAN2	Q504Q3	1202 aa	Known RBP	10.81	□□□□□ -0.68
TCF4-267	ENST00000629343	ISM2	Q6H9L7	571 aa		10.81	□□□□□ -0.68
TCF4-267	ENST00000629343	NELFCD	Q8IXH7	590 aa		10.81	□□□□□ -0.68
TCF4-267	ENST00000629343	C12orf56	Q8IXR9	622 aa		10.81	□□□□□ -0.68
TCF4-267	ENST00000629343	GUF1	Q8N442	669 aa	Known RBP	10.81	□□□□□ -0.68
TCF4-267	ENST00000629343	RSPH1	Q8WYR4	309 aa		10.81	□□□□□ -0.68
TCF4-267	ENST00000629343	CCDC47	Q96A33	483 aa	Known RBP	10.81	□□□□□ -0.68
TCF4-267	ENST00000629343	ZMAT2	Q96NC0	199 aa	Known RBP	10.81	□□□□□ -0.68
TCF4-267	ENST00000629343	CBWD1	Q9BRT8	395 aa		10.81	□□□□□ -0.68
TCF4-267	ENST00000629343	C17orf80	Q9BSJ5	609 aa		10.81	□□□□□ -0.68
TCF4-267	ENST00000629343	APOL6	Q9BWW8	343 aa		10.81	□□□□□ -0.68
TCF4-267	ENST00000629343	NRDE2	Q9H7Z3	1164 aa		10.81	□□□□□ -0.68
TCF4-267	ENST00000629343	PLEKHA5	Q9HAU0	1116 aa		10.81	□□□□□ -0.68
TCF4-267	ENST00000629343	RMND1	Q9NWS8	449 aa		10.81	□□□□□ -0.68
TCF4-267	ENST00000629343	HCST	Q9UBK5	93 aa		10.81	□□□□□ -0.68
TCF4-267	ENST00000629343	AGO2	Q9UKV8	859 aa	Known RBP	10.81	□□□□□ -0.68
TCF4-267	ENST00000629343	PLAGL2	Q9UPG8	496 aa		10.81	□□□□□ -0.68
TCF4-267	ENST00000629343	MAPK8IP1	Q9UQF2	711 aa		10.81	□□□□□ -0.68
TCF4-267	ENST00000629343	ZMYM2	Q9UBW7	1377 aa		10.8	□□□□□ -0.68
TCF4-267	ENST00000629343	TMEM265	A0A087WTH1	108 aa		10.8	□□□□□ -0.68
TCF4-267	ENST00000629343	EPOP	A6NHQ4	379 aa		10.8	□□□□□ -0.68
TCF4-267	ENST00000629343	LACTBL1	A8MY62	500 aa		10.8	□□□□□ -0.68
TCF4-267	ENST00000629343	C5orf67	F2Z3F1	127 aa		10.8	□□□□□ -0.68
TCF4-267	ENST00000629343	PDXK	O00764	312 aa		10.8	□□□□□ -0.68
TCF4-267	ENST00000629343	POMC	P01189	267 aa		10.8	□□□□□ -0.68
TCF4-267	ENST00000629343	ALDH2	P05091	517 aa		10.8	□□□□□ -0.68
TCF4-267	ENST00000629343	RB1	P06400	928 aa		10.8	□□□□□ -0.68
TCF4-267	ENST00000629343	GALT	P07902	379 aa		10.8	□□□□□ -0.68
TCF4-267	ENST00000629343	CD44	P16070	742 aa	Known RBP	10.8	□□□□□ -0.68
TCF4-267	ENST00000629343	ACOT2	P49753	483 aa		10.8	□□□□□ -0.68
TCF4-267	ENST00000629343	MCCD1	P59942	119 aa	Predicted RBP	10.8	□□□□□ -0.68
TCF4-267	ENST00000629343	DSC1	Q08554	894 aa		10.8	□□□□□ -0.68
TCF4-267	ENST00000629343	GRIN2C	Q14957	1233 aa		10.8	□□□□□ -0.68
TCF4-267	ENST00000629343	ENOX2	Q16206	610 aa	Known RBP	10.8	□□□□□ -0.68
TCF4-267	ENST00000629343	KYAT1	Q16773	422 aa		10.8	□□□□□ -0.68
TCF4-267	ENST00000629343	EPC2	Q52LR7	807 aa		10.8	□□□□□ -0.68
TCF4-267	ENST00000629343	CENPP	Q6IPU0	288 aa		10.8	□□□□□ -0.68
TCF4-267	ENST00000629343	SLC9A9	Q8IVB4	645 aa		10.8	□□□□□ -0.68
TCF4-267	ENST00000629343	COLGALT2	Q8IYK4	626 aa		10.8	□□□□□ -0.68
TCF4-267	ENST00000629343	SMYD4	Q8IYR2	804 aa	Predicted RBP	10.8	□□□□□ -0.68
TCF4-267	ENST00000629343	HACE1	Q8IYU2	909 aa		10.8	□□□□□ -0.68
TCF4-267	ENST00000629343	ABI1	Q8IZP0	508 aa		10.8	□□□□□ -0.68
TCF4-267	ENST00000629343	ADSSL1	Q8N142	457 aa		10.8	□□□□□ -0.68
TCF4-267	ENST00000629343	POMGNT1	Q8WZA1	660 aa		10.8	□□□□□ -0.68
TCF4-267	ENST00000629343	TGS1	Q96RS0	853 aa	Known RBP	10.8	□□□□□ -0.68
TCF4-267	ENST00000629343	MSTO1	Q9BUK6	570 aa		10.8	□□□□□ -0.68
TCF4-267	ENST00000629343	CCDC94	Q9BW85	323 aa	Predicted RBP	10.8	□□□□□ -0.68
TCF4-267	ENST00000629343	PCIF1	Q9H4Z3	704 aa		10.8	□□□□□ -0.68
TCF4-267	ENST00000629343	AGPAT3	Q9NRZ7	376 aa		10.8	□□□□□ -0.68
TCF4-267	ENST00000629343	CGN	Q9P2M7	1197 aa	Known RBP	10.8	□□□□□ -0.68
TCF4-267	ENST00000629343	ANKFY1	Q9P2R3	1169 aa		10.8	□□□□□ -0.68
TCF4-267	ENST00000629343	TRAF3IP3	Q9Y228	551 aa		10.8	□□□□□ -0.68
TCF4-267	ENST00000629343	UBE4B	O95155	1302 aa		10.8	□□□□□ -0.68
TCF4-267	ENST00000629343	COL4A6	Q14031	1691 aa		10.79	□□□□□ -0.68
TCF4-267	ENST00000629343	MICAL3	Q7RTP6	2002 aa		10.79	□□□□□ -0.68
TCF4-267	ENST00000629343	RFXAP	O00287	272 aa		10.79	□□□□□ -0.68
TCF4-267	ENST00000629343	KIAA0391	O15091	583 aa	Known RBP	10.79	□□□□□ -0.68
TCF4-267	ENST00000629343	CLIC2	O15247	247 aa		10.79	□□□□□ -0.68
TCF4-267	ENST00000629343	EXTL3	O43909	919 aa		10.79	□□□□□ -0.68
TCF4-267	ENST00000629343	LPXN	O60711	386 aa		10.79	□□□□□ -0.68
TCF4-267	ENST00000629343	EFEMP2	O95967	443 aa		10.79	□□□□□ -0.68
TCF4-267	ENST00000629343	HARS	P12081	509 aa	Known RBP	10.79	□□□□□ -0.68
TCF4-267	ENST00000629343	IGFBP6	P24592	240 aa	Predicted RBP	10.79	□□□□□ -0.68
TCF4-267	ENST00000629343	MLH1	P40692	756 aa		10.79	□□□□□ -0.68
TCF4-267	ENST00000629343	SCNN1G	P51170	649 aa		10.79	□□□□□ -0.68
TCF4-267	ENST00000629343	MYBPC2	Q14324	1141 aa		10.79	□□□□□ -0.68
TCF4-267	ENST00000629343	NFIL3	Q16649	462 aa		10.79	□□□□□ -0.68
TCF4-267	ENST00000629343	ZCWPW2	Q504Y3	356 aa		10.79	□□□□□ -0.68
TCF4-267	ENST00000629343	CD300LG	Q6UXG3	332 aa		10.79	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 71 ms