RNA–Protein interactions for RNA: ENST00000623610.1

CDKL5-206, Transcript of cyclin dependent kinase like 5, humanhuman

Gene CDKL5, Length 2,130 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-206ENST00000623610 SRCAPQ6ZRS2 3230 aa9.27□□□□□ -0.92
CDKL5-206ENST00000623610 CRB1P82279 1406 aa9.27□□□□□ -0.93
CDKL5-206ENST00000623610 ARHGAP10A1A4S6 786 aa9.27□□□□□ -0.93
CDKL5-206ENST00000623610 CAPN14A8MX76 684 aa9.27□□□□□ -0.93
CDKL5-206ENST00000623610 C6orf229H3BNL8 230 aa9.27□□□□□ -0.93
CDKL5-206ENST00000623610 DDX39AO00148 427 aaKnown RBP9.27□□□□□ -0.93
CDKL5-206ENST00000623610 FMO6PO60774 539 aa9.27□□□□□ -0.93
CDKL5-206ENST00000623610 POP4O95707 220 aaKnown RBP9.27□□□□□ -0.93
CDKL5-206ENST00000623610 OPN1MWP04001 364 aa9.27□□□□□ -0.93
CDKL5-206ENST00000623610 SNRNP70P08621 437 aaKnown RBP9.27□□□□□ -0.93
CDKL5-206ENST00000623610 OPN1MW2P0DN77 364 aa9.27□□□□□ -0.93
CDKL5-206ENST00000623610 OPN1MW3P0DN78 364 aa9.27□□□□□ -0.93
CDKL5-206ENST00000623610 PPP2R1AP30153 589 aa9.27□□□□□ -0.93
CDKL5-206ENST00000623610 MCM5P33992 734 aa9.27□□□□□ -0.93
CDKL5-206ENST00000623610 AP3M2P53677 418 aa9.27□□□□□ -0.93
CDKL5-206ENST00000623610 IFI35P80217 286 aaPredicted RBP9.27□□□□□ -0.93
CDKL5-206ENST00000623610 DNM1Q05193 864 aaKnown RBP9.27□□□□□ -0.93
CDKL5-206ENST00000623610 SKOR2Q2VWA4 1001 aaPredicted RBP9.27□□□□□ -0.93
CDKL5-206ENST00000623610 TMEM240Q5SV17 173 aa9.27□□□□□ -0.93
CDKL5-206ENST00000623610 C6orf132Q5T0Z8 1188 aa9.27□□□□□ -0.93
CDKL5-206ENST00000623610 NAIF1Q69YI7 327 aaPredicted RBP9.27□□□□□ -0.93
CDKL5-206ENST00000623610 NEK5Q6P3R8 708 aa9.27□□□□□ -0.93
CDKL5-206ENST00000623610 LBX2Q6XYB7 198 aa9.27□□□□□ -0.93
CDKL5-206ENST00000623610 PPP1R21Q6ZMI0 780 aa9.27□□□□□ -0.93
CDKL5-206ENST00000623610 CAND1Q86VP6 1230 aaKnown RBP9.27□□□□□ -0.93
CDKL5-206ENST00000623610 OSTM1Q86WC4 334 aa9.27□□□□□ -0.93
CDKL5-206ENST00000623610 GRAMD2AQ8IUY3 354 aa9.27□□□□□ -0.93
CDKL5-206ENST00000623610 PRR18Q8N4B5 295 aa9.27□□□□□ -0.93
CDKL5-206ENST00000623610 TOR1AIP2Q8NFQ8 470 aa9.27□□□□□ -0.93
CDKL5-206ENST00000623610 DACH2Q96NX9 599 aa9.27□□□□□ -0.93
CDKL5-206ENST00000623610 TSGA10Q9BZW7 698 aa9.27□□□□□ -0.93
CDKL5-206ENST00000623610 SMARCAD1Q9H4L7 1026 aa9.27□□□□□ -0.93
CDKL5-206ENST00000623610 BICC1Q9H694 974 aaKnown RBP9.27□□□□□ -0.93
CDKL5-206ENST00000623610 PDE11AQ9HCR9 933 aa9.27□□□□□ -0.93
CDKL5-206ENST00000623610 MARK1Q9P0L2 795 aa9.27□□□□□ -0.93
CDKL5-206ENST00000623610 ADD3Q9UEY8 706 aaKnown RBP9.27□□□□□ -0.93
CDKL5-206ENST00000623610 RASAL2Q9UJF2 1139 aa9.27□□□□□ -0.93
CDKL5-206ENST00000623610 PCDHGB4Q9UN71 923 aa9.27□□□□□ -0.93
CDKL5-206ENST00000623610 CHTOPQ9Y3Y2 248 aaKnown RBP9.27□□□□□ -0.93
CDKL5-206ENST00000623610 ENC1O14682 589 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 PLD2O14939 933 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 OPA1O60313 960 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 DAB1O75553 588 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 APBA3O96018 575 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 LTA4HP09960 611 aaKnown RBP9.26□□□□□ -0.93
CDKL5-206ENST00000623610 CKBP12277 381 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 ENDOUP21128 410 aaKnown RBP9.26□□□□□ -0.93
CDKL5-206ENST00000623610 SLC16A2P36021 539 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 AMPHP49418 695 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 GPC3P51654 580 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 HADHBP55084 474 aaKnown RBP9.26□□□□□ -0.93
CDKL5-206ENST00000623610 BYSLQ13895 437 aaKnown RBP9.26□□□□□ -0.93
CDKL5-206ENST00000623610 FRG1Q14331 258 aaKnown RBP9.26□□□□□ -0.93
CDKL5-206ENST00000623610 ZNF460Q14592 562 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 ZNF600Q6ZNG1 722 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 SPATA24Q86W54 205 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 UNC45BQ8IWX7 931 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 TCP11L2Q8N4U5 519 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 SIMC1Q8NDZ2 872 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 NPLOC4Q8TAT6 608 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 SLC39A7Q92504 469 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 IP6K1Q92551 441 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 PLD4Q96BZ4 506 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 LTV1Q96GA3 475 aaPredicted RBP9.26□□□□□ -0.93
CDKL5-206ENST00000623610 ACO2Q99798 780 aaKnown RBP9.26□□□□□ -0.93
CDKL5-206ENST00000623610 TSEN34Q9BSV6 310 aaKnown RBP9.26□□□□□ -0.93
CDKL5-206ENST00000623610 CERS4Q9HA82 394 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 WDR19Q8NEZ3 1342 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 ABCC6O95255 1503 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 MAP2P11137 1827 aaKnown RBP9.26□□□□□ -0.93
CDKL5-206ENST00000623610 C16orf96A6NNT2 1141 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 C3orf80F5H4A9 247 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 VWA5AO00534 786 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 DNAJC8O75937 253 aaPredicted RBP9.26□□□□□ -0.93
CDKL5-206ENST00000623610 TRIM16O95361 564 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 TROVE2P10155 538 aaKnown RBP eCLIP9.26□□□□□ -0.93
CDKL5-206ENST00000623610 HOXC9P31274 260 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 CCT8P50990 548 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 SLC12A3P55017 1021 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 BLMHQ13867 455 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 BMPR2Q13873 1038 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 SURF1Q15526 300 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 MAPKAPK3Q16644 382 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 INAVAQ3KP66 663 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 C1orf141Q5JVX7 400 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 COX20Q5RI15 118 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 FAM182BQ5T319 152 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 IFIT1BQ5T764 474 aaKnown RBP9.26□□□□□ -0.93
CDKL5-206ENST00000623610 LRSAM1Q6UWE0 723 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 B3GNT6Q6ZMB0 384 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 HOOK3Q86VS8 718 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 KRT73Q86Y46 540 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 PTRH1Q86Y79 214 aaKnown RBP9.26□□□□□ -0.93
CDKL5-206ENST00000623610 NANOS1Q8WY41 292 aaKnown RBP9.26□□□□□ -0.93
CDKL5-206ENST00000623610 KISS1RQ969F8 398 aaPredicted RBP9.26□□□□□ -0.93
CDKL5-206ENST00000623610 VPS50Q96JG6 964 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 EYA3Q99504 573 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 MTFR1LQ9H019 292 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 ZNF277Q9NRM2 450 aaPredicted RBP9.26□□□□□ -0.93
CDKL5-206ENST00000623610 TOMM22Q9NS69 142 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms