RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 OGTO15294 1046 aa21.63■■□□□ 1.05
PDLIM2-221ENST00000622702 UPP2O95045 317 aa21.63■■□□□ 1.05
PDLIM2-221ENST00000622702 NPTXRO95502 500 aa21.63■■□□□ 1.05
PDLIM2-221ENST00000622702 RAB27AP51159 221 aa21.63■■□□□ 1.05
PDLIM2-221ENST00000622702 MYL5Q02045 173 aa21.63■■□□□ 1.05
PDLIM2-221ENST00000622702 ADAM9Q13443 819 aa21.63■■□□□ 1.05
PDLIM2-221ENST00000622702 RAB30Q15771 203 aa21.63■■□□□ 1.05
PDLIM2-221ENST00000622702 SPATA1Q5VX52 437 aa21.63■■□□□ 1.05
PDLIM2-221ENST00000622702 CSGALNACT2Q8N6G5 542 aa21.63■■□□□ 1.05
PDLIM2-221ENST00000622702 XXYLT1Q8NBI6 393 aa21.63■■□□□ 1.05
PDLIM2-221ENST00000622702 FBXL18Q96ME1 805 aa21.63■■□□□ 1.05
PDLIM2-221ENST00000622702 PCIF1Q9H4Z3 704 aa21.63■■□□□ 1.05
PDLIM2-221ENST00000622702 C1orf112Q9NSG2 853 aa21.63■■□□□ 1.05
PDLIM2-221ENST00000622702 FAM105AQ9NUU6 356 aa21.63■■□□□ 1.05
PDLIM2-221ENST00000622702 PCDHA11Q9Y5I1 949 aa21.63■■□□□ 1.05
PDLIM2-221ENST00000622702 CHD9Q3L8U1 2897 aa21.62■■□□□ 1.05
PDLIM2-221ENST00000622702 A0A0U1RQF3 1178 aa21.62■■□□□ 1.05
PDLIM2-221ENST00000622702 IKBKBO14920 756 aa21.62■■□□□ 1.05
PDLIM2-221ENST00000622702 CETN3O15182 167 aa21.62■■□□□ 1.05
PDLIM2-221ENST00000622702 ZNF623O75123 536 aa21.62■■□□□ 1.05
PDLIM2-221ENST00000622702 GJB5O95377 273 aa21.62■■□□□ 1.05
PDLIM2-221ENST00000622702 LDHAP00338 332 aaKnown RBP21.62■■□□□ 1.05
PDLIM2-221ENST00000622702 MYOGP15173 224 aa21.62■■□□□ 1.05
PDLIM2-221ENST00000622702 CYP2J2P51589 502 aa21.62■■□□□ 1.05
PDLIM2-221ENST00000622702 HSP90AA2PQ14568 343 aaPredicted RBP21.62■■□□□ 1.05
PDLIM2-221ENST00000622702 KYAT1Q16773 422 aa21.62■■□□□ 1.05
PDLIM2-221ENST00000622702 SLC24A5Q71RS6 500 aa21.62■■□□□ 1.05
PDLIM2-221ENST00000622702 FAM200AQ8TCP9 573 aa21.62■■□□□ 1.05
PDLIM2-221ENST00000622702 TOP1MTQ969P6 601 aa21.62■■□□□ 1.05
PDLIM2-221ENST00000622702 CEP63Q96MT8 703 aa21.62■■□□□ 1.05
PDLIM2-221ENST00000622702 TRIM6Q9C030 488 aaPredicted RBP21.62■■□□□ 1.05
PDLIM2-221ENST00000622702 KIAA1586Q9HCI6 787 aa21.62■■□□□ 1.05
PDLIM2-221ENST00000622702 YBX2Q9Y2T7 364 aaKnown RBP21.62■■□□□ 1.05
PDLIM2-221ENST00000622702 C9IYK1 514 aa21.61■■□□□ 1.05
PDLIM2-221ENST00000622702 TLL1O43897 1013 aa21.61■■□□□ 1.05
PDLIM2-221ENST00000622702 EXTL3O43909 919 aa21.61■■□□□ 1.05
PDLIM2-221ENST00000622702 HARSP12081 509 aaKnown RBP21.61■■□□□ 1.05
PDLIM2-221ENST00000622702 SKIP12755 728 aa21.61■■□□□ 1.05
PDLIM2-221ENST00000622702 FAM189BP81408 668 aa21.61■■□□□ 1.05
PDLIM2-221ENST00000622702 NCAPHQ15003 741 aa21.61■■□□□ 1.05
PDLIM2-221ENST00000622702 IQCB1Q15051 598 aa21.61■■□□□ 1.05
PDLIM2-221ENST00000622702 GPR153Q6NV75 609 aa21.61■■□□□ 1.05
PDLIM2-221ENST00000622702 GPD1LQ8N335 351 aa21.61■■□□□ 1.05
PDLIM2-221ENST00000622702 TIFAQ96CG3 184 aa21.61■■□□□ 1.05
PDLIM2-221ENST00000622702 CBX8Q9HC52 389 aa21.61■■□□□ 1.05
PDLIM2-221ENST00000622702 PCDHB2Q9Y5E7 798 aa21.61■■□□□ 1.05
PDLIM2-221ENST00000622702 EXOC3O60645 756 aa21.6■■□□□ 1.05
PDLIM2-221ENST00000622702 FGFR1OPO95684 399 aaKnown RBP21.6■■□□□ 1.05
PDLIM2-221ENST00000622702 GRM5P41594 1212 aa21.6■■□□□ 1.05
PDLIM2-221ENST00000622702 POU5F1Q01860 360 aaKnown RBP21.6■■□□□ 1.05
PDLIM2-221ENST00000622702 MRPL10Q7Z7H8 261 aaKnown RBP21.6■■□□□ 1.05
PDLIM2-221ENST00000622702 DHX40Q8IX18 779 aaKnown RBP21.6■■□□□ 1.05
PDLIM2-221ENST00000622702 THNSL1Q8IYQ7 743 aa21.6■■□□□ 1.05
PDLIM2-221ENST00000622702 AOPEPQ8N6M6 819 aa21.6■■□□□ 1.05
PDLIM2-221ENST00000622702 CEP120Q8N960 986 aa21.6■■□□□ 1.05
PDLIM2-221ENST00000622702 SMG8Q8ND04 991 aaKnown RBP21.6■■□□□ 1.05
PDLIM2-221ENST00000622702 ZSWIM2Q8NEG5 633 aa21.6■■□□□ 1.05
PDLIM2-221ENST00000622702 NOC3LQ8WTT2 800 aaKnown RBP21.6■■□□□ 1.05
PDLIM2-221ENST00000622702 SAAL1Q96ER3 474 aa21.6■■□□□ 1.05
PDLIM2-221ENST00000622702 MKNK1Q9BUB5 465 aa21.6■■□□□ 1.05
PDLIM2-221ENST00000622702 SRRTQ9BXP5 876 aaKnown RBP21.6■■□□□ 1.05
PDLIM2-221ENST00000622702 NKX2-4Q9H2Z4 354 aa21.6■■□□□ 1.05
PDLIM2-221ENST00000622702 NFE2L3Q9Y4A8 694 aa21.6■■□□□ 1.05
PDLIM2-221ENST00000622702 IPPQ9Y573 584 aa21.6■■□□□ 1.05
PDLIM2-221ENST00000622702 SMTNL1A8MU46 457 aa21.59■■□□□ 1.05
PDLIM2-221ENST00000622702 MAPK13O15264 365 aa21.59■■□□□ 1.05
PDLIM2-221ENST00000622702 CLTAP09496 248 aa21.59■■□□□ 1.05
PDLIM2-221ENST00000622702 IBSPP21815 317 aaPredicted RBP21.59■■□□□ 1.05
PDLIM2-221ENST00000622702 TPD52L1Q16890 204 aaPredicted RBP21.59■■□□□ 1.05
PDLIM2-221ENST00000622702 CRELD2Q6UXH1 353 aaPredicted RBP21.59■■□□□ 1.05
PDLIM2-221ENST00000622702 FILIP1Q7Z7B0 1213 aa21.59■■□□□ 1.05
PDLIM2-221ENST00000622702 EEF2KMTQ96G04 330 aa21.59■■□□□ 1.05
PDLIM2-221ENST00000622702 RAD9AQ99638 391 aa21.59■■□□□ 1.05
PDLIM2-221ENST00000622702 FAM213AQ9BRX8 229 aa21.59■■□□□ 1.05
PDLIM2-221ENST00000622702 NXF3Q9H4D5 531 aaKnown RBP21.59■■□□□ 1.05
PDLIM2-221ENST00000622702 THAP9Q9H5L6 903 aa21.59■■□□□ 1.05
PDLIM2-221ENST00000622702 CPSF3Q9UKF6 684 aaKnown RBP21.59■■□□□ 1.05
PDLIM2-221ENST00000622702 FRMD4BQ9Y2L6 1034 aa21.59■■□□□ 1.05
PDLIM2-221ENST00000622702 TTC3P53804 2025 aa21.59■■□□□ 1.05
PDLIM2-221ENST00000622702 GOLGA8IPA6NC78 632 aa21.58■■□□□ 1.05
PDLIM2-221ENST00000622702 GOLGA8JA6NMD2 632 aa21.58■■□□□ 1.05
PDLIM2-221ENST00000622702 SLC16A3O15427 465 aaKnown RBP21.58■■□□□ 1.05
PDLIM2-221ENST00000622702 AKAP3O75969 853 aa21.58■■□□□ 1.05
PDLIM2-221ENST00000622702 STAG3L1P0CL83 205 aa21.58■■□□□ 1.05
PDLIM2-221ENST00000622702 CASP4P49662 377 aa21.58■■□□□ 1.05
PDLIM2-221ENST00000622702 ACOT2P49753 483 aa21.58■■□□□ 1.05
PDLIM2-221ENST00000622702 SNRNP35Q16560 246 aaKnown RBP21.58■■□□□ 1.05
PDLIM2-221ENST00000622702 ZBTB41Q5SVQ8 909 aa21.58■■□□□ 1.05
PDLIM2-221ENST00000622702 CEP135Q66GS9 1140 aa21.58■■□□□ 1.05
PDLIM2-221ENST00000622702 ECHDC2Q86YB7 292 aa21.58■■□□□ 1.05
PDLIM2-221ENST00000622702 HACE1Q8IYU2 909 aa21.58■■□□□ 1.05
PDLIM2-221ENST00000622702 CCDC94Q9BW85 323 aaPredicted RBP21.58■■□□□ 1.05
PDLIM2-221ENST00000622702 SLC28A3Q9HAS3 691 aa21.58■■□□□ 1.05
PDLIM2-221ENST00000622702 CDH23Q9H251 3354 aa21.58■■□□□ 1.05
PDLIM2-221ENST00000622702 ZNF233A6NK53 670 aa21.58■■□□□ 1.04
PDLIM2-221ENST00000622702 CA3P07451 260 aa21.58■■□□□ 1.04
PDLIM2-221ENST00000622702 ATF7P17544 494 aaPredicted RBP21.58■■□□□ 1.04
PDLIM2-221ENST00000622702 PSMC2P35998 433 aaKnown RBP21.58■■□□□ 1.04
PDLIM2-221ENST00000622702 SEZ6Q53EL9 994 aa21.58■■□□□ 1.04
PDLIM2-221ENST00000622702 ZNF697Q5TEC3 545 aa21.58■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms