RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 LRRC19Q9H756 370 aa10.33□□□□□ -0.76
IGHV3-54-201ENST00000622166 ACTR5Q9H9F9 607 aaPredicted RBP10.33□□□□□ -0.76
IGHV3-54-201ENST00000622166 VEZTQ9HBM0 779 aa10.33□□□□□ -0.76
IGHV3-54-201ENST00000622166 AVENQ9NQS1 362 aaPredicted RBP10.33□□□□□ -0.76
IGHV3-54-201ENST00000622166 BCCIPQ9P287 314 aaKnown RBP eCLIP10.33□□□□□ -0.76
IGHV3-54-201ENST00000622166 MTRF1LQ9UGC7 380 aaKnown RBP10.33□□□□□ -0.76
IGHV3-54-201ENST00000622166 GOLGA8IPA6NC78 632 aa10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 GOLGA8JA6NMD2 632 aa10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 MAFGO15525 162 aa10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 GRIN3BO60391 1043 aa10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 DKC1O60832 514 aaKnown RBP eCLIP10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 ZBED4O75132 1171 aa10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 CAND2O75155 1236 aa10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 AGTP01019 485 aa10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 RARAP10276 462 aa10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 RARGP13631 454 aa10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 GARTP22102 1010 aa10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 TMOD1P28289 359 aa10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 USP8P40818 1118 aa10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 MMP13P45452 471 aa10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 NPTX2P47972 431 aa10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 PLTPP55058 493 aa10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 RWDD2BP57060 319 aa10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 GCNT1Q02742 428 aa10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 CYP24A1Q07973 514 aa10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 ACTN3Q08043 901 aaPredicted RBP10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 ZNF568Q3ZCX4 644 aa10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 LACTB2Q53H82 288 aaPredicted RBP10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 ODF2Q5BJF6 829 aa10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 FAM102BQ5T8I3 360 aa10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 DENND2CQ68D51 928 aa10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 SLC39A4Q6P5W5 647 aa10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 CCDC137Q6PK04 289 aaKnown RBP10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 C15orf39Q6ZRI6 1047 aa10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 SYDE1Q6ZW31 735 aaPredicted RBP10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 ADAT2Q7Z6V5 191 aaKnown RBP10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 USP37Q86T82 979 aa10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 SLC47A2Q86VL8 602 aa10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 LARGE2Q8N3Y3 721 aa10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 TTLL6Q8N841 843 aa10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 FBXL13Q8NEE6 735 aa10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 FBXO25Q8TCJ0 367 aa10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 P3H4Q92791 437 aa10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 KAT2BQ92831 832 aa10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 TATDN2Q93075 761 aa10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 GPRASP2Q96D09 838 aa10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 MOV10L1Q9BXT6 1211 aaKnown RBP10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 ROPN1BQ9BZX4 212 aaPredicted RBP10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 TAOK3Q9H2K8 898 aa10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 ROPN1Q9HAT0 212 aaPredicted RBP10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 LRRC4CQ9HCJ2 640 aa10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 RAVER2Q9HCJ3 691 aaKnown RBP10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 PPANQ9NQ55 473 aaKnown RBP10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 GPRC5CQ9NQ84 441 aa10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 PDLIM7Q9NR12 457 aa10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 PXMP2Q9NR77 195 aa10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 RAB20Q9NX57 234 aa10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 WHRNQ9P202 907 aa10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 DDX20Q9UHI6 824 aaKnown RBP10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 ZNRF3Q9ULT6 936 aa10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 PASKQ96RG2 1323 aa10.32□□□□□ -0.76
IGHV3-54-201ENST00000622166 DENND3A2RUS2 1198 aa10.31□□□□□ -0.76
IGHV3-54-201ENST00000622166 DCDC2CA8MYV0 355 aa10.31□□□□□ -0.76
IGHV3-54-201ENST00000622166 SPOPO43791 374 aa10.31□□□□□ -0.76
IGHV3-54-201ENST00000622166 ATP9AO75110 1047 aa10.31□□□□□ -0.76
IGHV3-54-201ENST00000622166 SHBGP04278 402 aa10.31□□□□□ -0.76
IGHV3-54-201ENST00000622166 MYBL1P10243 752 aa10.31□□□□□ -0.76
IGHV3-54-201ENST00000622166 EIF2AK2P19525 551 aaKnown RBP10.31□□□□□ -0.76
IGHV3-54-201ENST00000622166 CNGA1P29973 690 aa10.31□□□□□ -0.76
IGHV3-54-201ENST00000622166 ABCD1P33897 745 aa10.31□□□□□ -0.76
IGHV3-54-201ENST00000622166 PDE6CP51160 858 aa10.31□□□□□ -0.76
IGHV3-54-201ENST00000622166 RPS6P62753 249 aaKnown RBP10.31□□□□□ -0.76
IGHV3-54-201ENST00000622166 PTP4A2Q12974 167 aa10.31□□□□□ -0.76
IGHV3-54-201ENST00000622166 QPCTQ16769 361 aa10.31□□□□□ -0.76
IGHV3-54-201ENST00000622166 SAMD1Q6SPF0 538 aaPredicted RBP10.31□□□□□ -0.76
IGHV3-54-201ENST00000622166 TRMT10CQ7L0Y3 403 aaKnown RBP10.31□□□□□ -0.76
IGHV3-54-201ENST00000622166 OTUD6AQ7L8S5 288 aa10.31□□□□□ -0.76
IGHV3-54-201ENST00000622166 TAX1BP1Q86VP1 789 aa10.31□□□□□ -0.76
IGHV3-54-201ENST00000622166 ZNF677Q86XU0 584 aa10.31□□□□□ -0.76
IGHV3-54-201ENST00000622166 GPD1LQ8N335 351 aa10.31□□□□□ -0.76
IGHV3-54-201ENST00000622166 PPM1KQ8N3J5 372 aa10.31□□□□□ -0.76
IGHV3-54-201ENST00000622166 TAS1R2Q8TE23 839 aa10.31□□□□□ -0.76
IGHV3-54-201ENST00000622166 BSNDQ8WZ55 320 aa10.31□□□□□ -0.76
IGHV3-54-201ENST00000622166 SEC16BQ96JE7 1060 aa10.31□□□□□ -0.76
IGHV3-54-201ENST00000622166 MAF1Q9H063 256 aa10.31□□□□□ -0.76
IGHV3-54-201ENST00000622166 STMN4Q9H169 189 aaPredicted RBP10.31□□□□□ -0.76
IGHV3-54-201ENST00000622166 CCDC134Q9H6E4 229 aa10.31□□□□□ -0.76
IGHV3-54-201ENST00000622166 KMT5AQ9NQR1 393 aa10.31□□□□□ -0.76
IGHV3-54-201ENST00000622166 TCEAL9Q9UHQ7 104 aa10.31□□□□□ -0.76
IGHV3-54-201ENST00000622166 ZBTB12Q9Y330 459 aaPredicted RBP10.31□□□□□ -0.76
IGHV3-54-201ENST00000622166 CAPN7Q9Y6W3 813 aa10.31□□□□□ -0.76
IGHV3-54-201ENST00000622166 SIP14410 1827 aa10.3□□□□□ -0.76
IGHV3-54-201ENST00000622166 TCRBV7S2A1N4TA0A589 114 aa10.3□□□□□ -0.76
IGHV3-54-201ENST00000622166 TMEM150BA6NC51 233 aa10.3□□□□□ -0.76
IGHV3-54-201ENST00000622166 H0YCG3 227 aa10.3□□□□□ -0.76
IGHV3-54-201ENST00000622166 RGS16O15492 202 aaPredicted RBP10.3□□□□□ -0.76
IGHV3-54-201ENST00000622166 RIPK2O43353 540 aa10.3□□□□□ -0.76
IGHV3-54-201ENST00000622166 CTNND1O60716 968 aaKnown RBP10.3□□□□□ -0.76
IGHV3-54-201ENST00000622166 GHRP10912 638 aa10.3□□□□□ -0.76
IGHV3-54-201ENST00000622166 MYCLP12524 364 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms