RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 ZNF184Q99676 751 aaPredicted RBP5.32□□□□□ -1.56
VPS13D-214ENST00000620676 PCSK1NQ9UHG2 260 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 ACEP12821 1306 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 UGGT2Q9NYU1 1516 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 M0R3G1 203 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 EYA2O00167 538 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 GNPATO15228 680 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 OR52Z1P0C646 297 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 COL9A3Q14050 684 aaPredicted RBP5.32□□□□□ -1.56
VPS13D-214ENST00000620676 NAB2Q15742 525 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 CCDC14Q49A88 953 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 SH3D19Q5HYK7 790 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 PRR23BQ6ZRT6 265 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 ENGASEQ8NFI3 743 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 ATG4AQ8WYN0 398 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 PRPF18Q99633 342 aaKnown RBP5.32□□□□□ -1.56
VPS13D-214ENST00000620676 TMEM260Q9NX78 707 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 DNAJC12Q9UKB3 198 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 WDR47O94967 919 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 ALOX12P18054 663 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 PKNOX1P55347 436 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 FOLH1Q04609 750 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 NCOA4Q13772 614 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 USP17L6PQ6QN14 398 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 SNF8Q96H20 258 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 OSBPL10Q9BXB5 764 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 GTSE1Q9NYZ3 720 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 RNF14Q9UBS8 474 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 TEX14Q8IWB6 1497 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 NOTOA8MTQ0 251 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 SPTLC1O15269 473 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 MAP3K13O43283 966 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 DPYDQ12882 1025 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 PPP2R5EQ16537 467 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 FOXP1Q9H334 677 aaPredicted RBP5.32□□□□□ -1.56
VPS13D-214ENST00000620676 PKD2L2Q9NZM6 624 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 CLEC11AQ9Y240 323 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 DGKBQ9Y6T7 804 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 KRT3P12035 628 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 ERVK-9P63128 1117 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 ATG16L1Q676U5 607 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 METTL13Q8N6R0 699 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 ZSWIM2Q8NEG5 633 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 RBM15Q96T37 977 aaKnown RBP eCLIP5.32□□□□□ -1.561e-6■■■□□ 15.4
VPS13D-214ENST00000620676 TRPV5Q9NQA5 729 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 FBXO9Q9UK97 447 aaPredicted RBP5.32□□□□□ -1.56
VPS13D-214ENST00000620676 SNX2O60749 519 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 GCLMP48507 274 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 RARS2Q5T160 578 aaKnown RBP5.32□□□□□ -1.56
VPS13D-214ENST00000620676 LRRC6Q86X45 466 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 DYNLL2Q96FJ2 89 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 ARMC7Q9H6L4 198 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 EPRSP07814 1512 aaKnown RBP5.32□□□□□ -1.56
VPS13D-214ENST00000620676 KRT4P19013 534 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 POLA2Q14181 598 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 TMEM63BQ5T3F8 832 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 APPL2Q8NEU8 664 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 FAF2Q96CS3 445 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 CEP295NLQ96MC4 621 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 STRNO43815 780 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 HSMCR30P0CW71 290 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 TFE3P19532 575 aaPredicted RBP5.32□□□□□ -1.56
VPS13D-214ENST00000620676 EFTUD2Q15029 972 aaKnown RBP eCLIP5.32□□□□□ -1.563e-7■■■□□ 14.9
VPS13D-214ENST00000620676 PCGF5Q86SE9 256 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 MAGEB18Q96M61 343 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 BSDC1Q9NW68 430 aaPredicted RBP5.32□□□□□ -1.56
VPS13D-214ENST00000620676 SNX13Q9Y5W8 968 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 MAST3O60307 1309 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 USP17L12C9JPN9 530 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 USP17L21D6R901 530 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 SNX16P57768 344 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 UBE2SQ16763 222 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 EGFLAMQ63HQ2 1017 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 MAPKAPK5Q8IW41 473 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 LRRC47Q8N1G4 583 aaKnown RBP5.32□□□□□ -1.56
VPS13D-214ENST00000620676 HSPBAP1Q96EW2 488 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 ECSITQ9BQ95 431 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 PCMTD2Q9NV79 361 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 UHRF1BP1Q6BDS2 1440 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 SRGAP2CP0DJJ0 459 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 SRGAP2BP0DMP2 458 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 POLGP54098 1239 aaPredicted RBP5.32□□□□□ -1.56
VPS13D-214ENST00000620676 PLA2G4EQ3MJ16 856 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 VPS50Q96JG6 964 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 EPB41L4AQ9HCS5 686 aaPredicted RBP5.32□□□□□ -1.56
VPS13D-214ENST00000620676 CAPN6Q9Y6Q1 641 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 PZPP20742 1482 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 COL17A1Q9UMD9 1497 aaPredicted RBP5.32□□□□□ -1.56
VPS13D-214ENST00000620676 IPO5O00410 1097 aaKnown RBP5.32□□□□□ -1.56
VPS13D-214ENST00000620676 MYL2P10916 166 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 GIPC2Q8TF65 315 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 COPS7BQ9H9Q2 264 aaPredicted RBP5.32□□□□□ -1.56
VPS13D-214ENST00000620676 TMOD3Q9NYL9 352 aa5.32□□□□□ -1.56
VPS13D-214ENST00000620676 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.31□□□□□ -1.56
VPS13D-214ENST00000620676 TUBP50607 506 aa5.31□□□□□ -1.56
VPS13D-214ENST00000620676 NCALDP61601 193 aa5.31□□□□□ -1.56
VPS13D-214ENST00000620676 FUT11Q495W5 492 aa5.31□□□□□ -1.56
VPS13D-214ENST00000620676 FAM26FQ5R3K3 315 aa5.31□□□□□ -1.56
VPS13D-214ENST00000620676 GPR107Q5VW38 600 aa5.31□□□□□ -1.56
VPS13D-214ENST00000620676 PTAR1Q7Z6K3 402 aaPredicted RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms