RNA–Protein interactions for RNA: ENST00000620578.4

COPS7B-224, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2 BASIC

Gene COPS7B, Length 2,500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-224ENST00000620578 TSPAN1O60635 241 aa16.48■□□□□ 0.23
COPS7B-224ENST00000620578 CXCL8P10145 99 aa16.48■□□□□ 0.23
COPS7B-224ENST00000620578 HOXA11P31270 313 aaPredicted RBP16.48■□□□□ 0.23
COPS7B-224ENST00000620578 MXI1P50539 228 aa16.48■□□□□ 0.23
COPS7B-224ENST00000620578 TSHZ1Q6ZSZ6 1077 aa16.48■□□□□ 0.23
COPS7B-224ENST00000620578 NUP58Q9BVL2 599 aa16.48■□□□□ 0.23
COPS7B-224ENST00000620578 C2orf40Q9H1Z8 148 aa16.48■□□□□ 0.23
COPS7B-224ENST00000620578 PDZD7Q9H5P4 517 aa16.48■□□□□ 0.23
COPS7B-224ENST00000620578 CNTNAP2Q9UHC6 1331 aa16.48■□□□□ 0.23
COPS7B-224ENST00000620578 IBSPP21815 317 aaPredicted RBP16.48■□□□□ 0.23
COPS7B-224ENST00000620578 TRIM14Q14142 442 aa16.48■□□□□ 0.23
COPS7B-224ENST00000620578 PDXDC1Q6P996 788 aa16.48■□□□□ 0.23
COPS7B-224ENST00000620578 ZPBP2Q6X784 338 aa16.48■□□□□ 0.23
COPS7B-224ENST00000620578 TMEM174Q8WUU8 243 aa16.48■□□□□ 0.23
COPS7B-224ENST00000620578 TATDN2Q93075 761 aa16.48■□□□□ 0.23
COPS7B-224ENST00000620578 EIF2AQ9BY44 585 aaKnown RBP16.48■□□□□ 0.23
COPS7B-224ENST00000620578 UNC93B1Q9H1C4 597 aa16.48■□□□□ 0.23
COPS7B-224ENST00000620578 GTF2IRD1Q9UHL9 959 aa16.48■□□□□ 0.23
COPS7B-224ENST00000620578 ARHGAP6O43182 974 aa16.47■□□□□ 0.23
COPS7B-224ENST00000620578 PROZP22891 400 aa16.47■□□□□ 0.23
COPS7B-224ENST00000620578 SNRPFP62306 86 aaKnown RBP16.47■□□□□ 0.23
COPS7B-224ENST00000620578 MPZL3Q6UWV2 235 aa16.47■□□□□ 0.23
COPS7B-224ENST00000620578 BEGAINQ9BUH8 593 aa16.47■□□□□ 0.23
COPS7B-224ENST00000620578 KCNG1Q9UIX4 513 aa16.47■□□□□ 0.23
COPS7B-224ENST00000620578 SIP14410 1827 aa16.47■□□□□ 0.23
COPS7B-224ENST00000620578 SMIM35A0A1B0GVV1 85 aa16.47■□□□□ 0.23
COPS7B-224ENST00000620578 CST3P01034 146 aaPredicted RBP16.47■□□□□ 0.23
COPS7B-224ENST00000620578 MCL1Q07820 350 aa16.47■□□□□ 0.23
COPS7B-224ENST00000620578 FIGNQ5HY92 759 aa16.47■□□□□ 0.23
COPS7B-224ENST00000620578 TDRD10Q5VZ19 366 aaKnown RBP16.47■□□□□ 0.23
COPS7B-224ENST00000620578 SLFN12LQ6IEE8 588 aa16.47■□□□□ 0.23
COPS7B-224ENST00000620578 PXYLP1Q8TE99 480 aa16.47■□□□□ 0.23
COPS7B-224ENST00000620578 PPP1R13BQ96KQ4 1090 aa16.47■□□□□ 0.23
COPS7B-224ENST00000620578 FNBP1Q96RU3 617 aa16.47■□□□□ 0.23
COPS7B-224ENST00000620578 ARID3AQ99856 593 aa16.47■□□□□ 0.23
COPS7B-224ENST00000620578 NHEJ1Q9H9Q4 299 aaPredicted RBP16.47■□□□□ 0.23
COPS7B-224ENST00000620578 UBE2TQ9NPD8 197 aaPredicted RBP16.47■□□□□ 0.23
COPS7B-224ENST00000620578 CEP72Q9P209 647 aa16.47■□□□□ 0.23
COPS7B-224ENST00000620578 TRIM10Q9UDY6 481 aa16.47■□□□□ 0.23
COPS7B-224ENST00000620578 DNAJC12Q9UKB3 198 aa16.47■□□□□ 0.23
COPS7B-224ENST00000620578 PLAGL2Q9UPG8 496 aa16.47■□□□□ 0.23
COPS7B-224ENST00000620578 PPP2R2CQ9Y2T4 447 aa16.47■□□□□ 0.23
COPS7B-224ENST00000620578 REXO2Q9Y3B8 237 aaKnown RBP16.47■□□□□ 0.23
COPS7B-224ENST00000620578 ZNF263O14978 683 aa16.46■□□□□ 0.23
COPS7B-224ENST00000620578 ZEB2O60315 1214 aa16.46■□□□□ 0.23
COPS7B-224ENST00000620578 ERLIN2O94905 339 aa16.46■□□□□ 0.23
COPS7B-224ENST00000620578 GUCY2FP51841 1108 aa16.46■□□□□ 0.23
COPS7B-224ENST00000620578 ACLYP53396 1101 aa16.46■□□□□ 0.23
COPS7B-224ENST00000620578 EPC2Q52LR7 807 aa16.46■□□□□ 0.23
COPS7B-224ENST00000620578 HGSNATQ68CP4 663 aa16.46■□□□□ 0.23
COPS7B-224ENST00000620578 CATSPER4Q7RTX7 472 aa16.46■□□□□ 0.23
COPS7B-224ENST00000620578 EHBP1Q8NDI1 1231 aa16.46■□□□□ 0.23
COPS7B-224ENST00000620578 KATNAL1Q9BW62 490 aa16.46■□□□□ 0.23
COPS7B-224ENST00000620578 HMX1Q9NP08 348 aaPredicted RBP16.46■□□□□ 0.23
COPS7B-224ENST00000620578 LZTFL1Q9NQ48 299 aa16.46■□□□□ 0.23
COPS7B-224ENST00000620578 PRMT7Q9NVM4 692 aaPredicted RBP16.46■□□□□ 0.23
COPS7B-224ENST00000620578 A0A1W2PQJ5 194 aa16.46■□□□□ 0.22
COPS7B-224ENST00000620578 OGTO15294 1046 aa16.46■□□□□ 0.22
COPS7B-224ENST00000620578 HSPA6P17066 643 aa16.46■□□□□ 0.22
COPS7B-224ENST00000620578 SNX17Q15036 470 aa16.46■□□□□ 0.22
COPS7B-224ENST00000620578 REXO1L1PQ8IX06 675 aa16.46■□□□□ 0.22
COPS7B-224ENST00000620578 CCDC112Q8NEF3 446 aa16.46■□□□□ 0.22
COPS7B-224ENST00000620578 ZNF397Q8NF99 534 aaPredicted RBP16.46■□□□□ 0.22
COPS7B-224ENST00000620578 DHX38Q92620 1227 aaKnown RBP16.46■□□□□ 0.22
COPS7B-224ENST00000620578 SPAG5Q96R06 1193 aa16.46■□□□□ 0.22
COPS7B-224ENST00000620578 APOL6Q9BWW8 343 aa16.46■□□□□ 0.22
COPS7B-224ENST00000620578 MTMR12Q9C0I1 747 aa16.46■□□□□ 0.22
COPS7B-224ENST00000620578 GPR88Q9GZN0 384 aa16.46■□□□□ 0.22
COPS7B-224ENST00000620578 CPSF3Q9UKF6 684 aaKnown RBP16.46■□□□□ 0.22
COPS7B-224ENST00000620578 ADGRG1Q9Y653 693 aa16.46■□□□□ 0.22
COPS7B-224ENST00000620578 RANBP2P49792 3224 aaKnown RBP16.45■□□□□ 0.22
COPS7B-224ENST00000620578 GFPT2O94808 682 aa16.45■□□□□ 0.22
COPS7B-224ENST00000620578 VNN1O95497 513 aa16.45■□□□□ 0.22
COPS7B-224ENST00000620578 EIF4BP23588 611 aaKnown RBP16.45■□□□□ 0.22
COPS7B-224ENST00000620578 HOXC8P31273 242 aa16.45■□□□□ 0.22
COPS7B-224ENST00000620578 EIF4A3P38919 411 aaKnown RBP16.45■□□□□ 0.22
COPS7B-224ENST00000620578 PPP2R3AQ06190 1150 aa16.45■□□□□ 0.22
COPS7B-224ENST00000620578 BIRC3Q13489 604 aa16.45■□□□□ 0.22
COPS7B-224ENST00000620578 CYP26C1Q6V0L0 522 aa16.45■□□□□ 0.22
COPS7B-224ENST00000620578 EFCAB13Q8IY85 973 aa16.45■□□□□ 0.22
COPS7B-224ENST00000620578 TRPV6Q9H1D0 765 aa16.45■□□□□ 0.22
COPS7B-224ENST00000620578 TNFSF13BQ9Y275 285 aa16.45■□□□□ 0.22
COPS7B-224ENST00000620578 THSD7BQ9C0I4 1608 aa16.45■□□□□ 0.22
COPS7B-224ENST00000620578 TRIP11Q15643 1979 aa16.45■□□□□ 0.22
COPS7B-224ENST00000620578 RCCD1A6NED2 376 aa16.45■□□□□ 0.22
COPS7B-224ENST00000620578 FOXN3O00409 490 aaPredicted RBP16.45■□□□□ 0.22
COPS7B-224ENST00000620578 CLSTN1O94985 981 aa16.45■□□□□ 0.22
COPS7B-224ENST00000620578 STAG3L1P0CL83 205 aa16.45■□□□□ 0.22
COPS7B-224ENST00000620578 DARSP14868 501 aaKnown RBP16.45■□□□□ 0.22
COPS7B-224ENST00000620578 ITGA7Q13683 1181 aa16.45■□□□□ 0.22
COPS7B-224ENST00000620578 DRAP1Q14919 205 aaPredicted RBP16.45■□□□□ 0.22
COPS7B-224ENST00000620578 PSMD6Q15008 389 aa16.45■□□□□ 0.22
COPS7B-224ENST00000620578 MEA1Q16626 185 aa16.45■□□□□ 0.22
COPS7B-224ENST00000620578 TSR1Q2NL82 804 aaKnown RBP16.45■□□□□ 0.22
COPS7B-224ENST00000620578 TDRD12Q587J7 1177 aaKnown RBP16.45■□□□□ 0.22
COPS7B-224ENST00000620578 KRT39Q6A163 491 aa16.45■□□□□ 0.22
COPS7B-224ENST00000620578 PPM1KQ8N3J5 372 aa16.45■□□□□ 0.22
COPS7B-224ENST00000620578 KCNN1Q92952 543 aa16.45■□□□□ 0.22
COPS7B-224ENST00000620578 NAA15Q9BXJ9 866 aaKnown RBP16.45■□□□□ 0.22
COPS7B-224ENST00000620578 NFKBIZQ9BYH8 718 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms