RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 C12orf56Q8IXR9 622 aa21.86■■□□□ 1.09
NEK3-208ENST00000618534 DYDC1Q8WWB3 177 aa21.86■■□□□ 1.09
NEK3-208ENST00000618534 TCP11Q8WWU5 503 aa21.86■■□□□ 1.09
NEK3-208ENST00000618534 PSPC1Q8WXF1 523 aaKnown RBP21.86■■□□□ 1.09
NEK3-208ENST00000618534 SEMA4DQ92854 862 aa21.86■■□□□ 1.09
NEK3-208ENST00000618534 CSRNP1Q96S65 589 aa21.86■■□□□ 1.09
NEK3-208ENST00000618534 GGT7Q9UJ14 662 aa21.86■■□□□ 1.09
NEK3-208ENST00000618534 GTF3C4Q9UKN8 822 aa21.86■■□□□ 1.09
NEK3-208ENST00000618534 ATRNL1Q5VV63 1379 aa21.86■■□□□ 1.09
NEK3-208ENST00000618534 OAS1P00973 400 aaKnown RBP21.85■■□□□ 1.09
NEK3-208ENST00000618534 EZRP15311 586 aaKnown RBP21.85■■□□□ 1.09
NEK3-208ENST00000618534 SLC8A1P32418 973 aa21.85■■□□□ 1.09
NEK3-208ENST00000618534 ELF1P32519 619 aa21.85■■□□□ 1.09
NEK3-208ENST00000618534 CHKAP35790 457 aa21.85■■□□□ 1.09
NEK3-208ENST00000618534 TBC1D1Q86TI0 1168 aaPredicted RBP21.85■■□□□ 1.09
NEK3-208ENST00000618534 SHC3Q92529 594 aa21.85■■□□□ 1.09
NEK3-208ENST00000618534 ARHGEF2Q92974 986 aaKnown RBP21.85■■□□□ 1.09
NEK3-208ENST00000618534 SH2D3AQ9BRG2 576 aa21.85■■□□□ 1.09
NEK3-208ENST00000618534 HOMER3Q9NSC5 361 aa21.85■■□□□ 1.09
NEK3-208ENST00000618534 TMEM120BA0PK00 339 aa21.85■■□□□ 1.09
NEK3-208ENST00000618534 C21orf2O43822 256 aa21.85■■□□□ 1.09
NEK3-208ENST00000618534 PDE6CP51160 858 aa21.85■■□□□ 1.09
NEK3-208ENST00000618534 MIER3Q7Z3K6 550 aa21.85■■□□□ 1.09
NEK3-208ENST00000618534 N4BP2L2Q92802 583 aaPredicted RBP21.85■■□□□ 1.09
NEK3-208ENST00000618534 FGFR1OP2Q9NVK5 253 aa21.85■■□□□ 1.09
NEK3-208ENST00000618534 CTNNAL1Q9UBT7 734 aa21.85■■□□□ 1.09
NEK3-208ENST00000618534 ZNFX1Q9P2E3 1918 aaKnown RBP21.85■■□□□ 1.09
NEK3-208ENST00000618534 FOXO6A8MYZ6 492 aa21.84■■□□□ 1.09
NEK3-208ENST00000618534 TCP11X1B4DZS4 312 aa21.84■■□□□ 1.09
NEK3-208ENST00000618534 UBOX5O94941 541 aa21.84■■□□□ 1.09
NEK3-208ENST00000618534 ALCAMQ13740 583 aa21.84■■□□□ 1.09
NEK3-208ENST00000618534 SGO2Q562F6 1265 aa21.84■■□□□ 1.09
NEK3-208ENST00000618534 TMX4Q9H1E5 349 aaPredicted RBP21.84■■□□□ 1.09
NEK3-208ENST00000618534 RANBP17Q9H2T7 1088 aaKnown RBP21.84■■□□□ 1.09
NEK3-208ENST00000618534 ASIC3Q9UHC3 531 aa21.84■■□□□ 1.09
NEK3-208ENST00000618534 EP400Q96L91 3159 aa21.84■■□□□ 1.09
NEK3-208ENST00000618534 CLTAP09496 248 aa21.84■■□□□ 1.09
NEK3-208ENST00000618534 PLS3P13797 630 aa21.84■■□□□ 1.09
NEK3-208ENST00000618534 CYP11B1P15538 503 aa21.84■■□□□ 1.09
NEK3-208ENST00000618534 ITGB5P18084 799 aa21.84■■□□□ 1.09
NEK3-208ENST00000618534 ALDH1B1P30837 517 aa21.84■■□□□ 1.09
NEK3-208ENST00000618534 VSTM1Q6UX27 236 aa21.84■■□□□ 1.09
NEK3-208ENST00000618534 PNMA8AQ86V59 439 aaPredicted RBP21.84■■□□□ 1.09
NEK3-208ENST00000618534 TBC1D31Q96DN5 1066 aa21.84■■□□□ 1.09
NEK3-208ENST00000618534 MXRA8Q9BRK3 442 aa21.84■■□□□ 1.09
NEK3-208ENST00000618534 ARHGEF10LQ9HCE6 1279 aa21.84■■□□□ 1.09
NEK3-208ENST00000618534 MLXIPLQ9NP71 852 aa21.84■■□□□ 1.09
NEK3-208ENST00000618534 DNAJC17Q9NVM6 304 aaKnown RBP21.84■■□□□ 1.09
NEK3-208ENST00000618534 WHRNQ9P202 907 aa21.84■■□□□ 1.09
NEK3-208ENST00000618534 UVRAGQ9P2Y5 699 aa21.84■■□□□ 1.09
NEK3-208ENST00000618534 MRPL11Q9Y3B7 192 aaKnown RBP21.84■■□□□ 1.09
NEK3-208ENST00000618534 ECE2O60344 883 aa21.83■■□□□ 1.09
NEK3-208ENST00000618534 MAPTP10636 758 aaKnown RBP21.83■■□□□ 1.09
NEK3-208ENST00000618534 MFAP3P55082 362 aa21.83■■□□□ 1.09
NEK3-208ENST00000618534 GRIPAP1Q4V328 841 aa21.83■■□□□ 1.09
NEK3-208ENST00000618534 RHBDF2Q6PJF5 856 aa21.83■■□□□ 1.09
NEK3-208ENST00000618534 HAUS6Q7Z4H7 955 aa21.83■■□□□ 1.09
NEK3-208ENST00000618534 TEX2Q8IWB9 1127 aa21.83■■□□□ 1.09
NEK3-208ENST00000618534 TMEM174Q8WUU8 243 aa21.83■■□□□ 1.09
NEK3-208ENST00000618534 ATG4AQ8WYN0 398 aa21.83■■□□□ 1.09
NEK3-208ENST00000618534 ELMO3Q96BJ8 720 aa21.83■■□□□ 1.09
NEK3-208ENST00000618534 RIT2Q99578 217 aa21.83■■□□□ 1.09
NEK3-208ENST00000618534 CHST7Q9NS84 486 aa21.83■■□□□ 1.09
NEK3-208ENST00000618534 SERPINA10Q9UK55 444 aa21.83■■□□□ 1.09
NEK3-208ENST00000618534 USP15Q9Y4E8 981 aaPredicted RBP21.83■■□□□ 1.09
NEK3-208ENST00000618534 ZHX2Q9Y6X8 837 aa21.83■■□□□ 1.09
NEK3-208ENST00000618534 FSCN2O14926 492 aa21.82■■□□□ 1.08
NEK3-208ENST00000618534 RARRES1P49788 294 aa21.82■■□□□ 1.08
NEK3-208ENST00000618534 CBWD2Q8IUF1 395 aa21.82■■□□□ 1.08
NEK3-208ENST00000618534 ANKRD42Q8N9B4 389 aa21.82■■□□□ 1.08
NEK3-208ENST00000618534 SLCO2A1Q92959 643 aa21.82■■□□□ 1.08
NEK3-208ENST00000618534 SERPINB12Q96P63 405 aa21.82■■□□□ 1.08
NEK3-208ENST00000618534 USP20Q9Y2K6 914 aa21.82■■□□□ 1.08
NEK3-208ENST00000618534 COL11A2P13942 1736 aaPredicted RBP21.82■■□□□ 1.08
NEK3-208ENST00000618534 CDR2Q01850 454 aa21.82■■□□□ 1.08
NEK3-208ENST00000618534 CCDC127Q96BQ5 260 aa21.82■■□□□ 1.08
NEK3-208ENST00000618534 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.82■■□□□ 1.08
NEK3-208ENST00000618534 ZBTB21Q9ULJ3 1066 aa21.82■■□□□ 1.08
NEK3-208ENST00000618534 SYNPO2Q9UMS6 1093 aa21.82■■□□□ 1.08
NEK3-208ENST00000618534 TMX2Q9Y320 296 aa21.82■■□□□ 1.08
NEK3-208ENST00000618534 TMEM150BA6NC51 233 aa21.81■■□□□ 1.08
NEK3-208ENST00000618534 CFAP73A6NFT4 308 aa21.81■■□□□ 1.08
NEK3-208ENST00000618534 SLC16A4O15374 487 aa21.81■■□□□ 1.08
NEK3-208ENST00000618534 ENTPD3O75355 529 aa21.81■■□□□ 1.08
NEK3-208ENST00000618534 P4HBP07237 508 aaKnown RBP21.81■■□□□ 1.08
NEK3-208ENST00000618534 NCALDP61601 193 aa21.81■■□□□ 1.08
NEK3-208ENST00000618534 ZYXQ15942 572 aaKnown RBP21.81■■□□□ 1.08
NEK3-208ENST00000618534 DHX38Q92620 1227 aaKnown RBP21.81■■□□□ 1.08
NEK3-208ENST00000618534 GPRC5CQ9NQ84 441 aa21.81■■□□□ 1.08
NEK3-208ENST00000618534 FKBP1AP62942 108 aaKnown RBP21.81■■□□□ 1.08
NEK3-208ENST00000618534 GTF2BQ00403 316 aa21.81■■□□□ 1.08
NEK3-208ENST00000618534 TRIP13Q15645 432 aaPredicted RBP21.81■■□□□ 1.08
NEK3-208ENST00000618534 HELQQ8TDG4 1101 aa21.81■■□□□ 1.08
NEK3-208ENST00000618534 HERPUD2Q9BSE4 406 aa21.81■■□□□ 1.08
NEK3-208ENST00000618534 ZNF646O15015 1829 aaPredicted RBP21.8■■□□□ 1.08
NEK3-208ENST00000618534 MAPK13O15264 365 aa21.8■■□□□ 1.08
NEK3-208ENST00000618534 PMM2O15305 246 aa21.8■■□□□ 1.08
NEK3-208ENST00000618534 CALCAP01258 141 aa21.8■■□□□ 1.08
NEK3-208ENST00000618534 KCNJ2P63252 427 aa21.8■■□□□ 1.08
NEK3-208ENST00000618534 NUGGCQ68CJ6 796 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms