RNA–Protein interactions for RNA: ENST00000618533.4

RPP40-207, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,056 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-207ENST00000618533 ZC2HC1CQ53FD0 456 aaPredicted RBP17.07■□□□□ 0.32
RPP40-207ENST00000618533 FAM26FQ5R3K3 315 aa17.07■□□□□ 0.32
RPP40-207ENST00000618533 KRBA2Q6ZNG9 492 aa17.07■□□□□ 0.32
RPP40-207ENST00000618533 THNSL1Q8IYQ7 743 aa17.07■□□□□ 0.32
RPP40-207ENST00000618533 KLHL23Q8NBE8 558 aa17.07■□□□□ 0.32
RPP40-207ENST00000618533 CCDC47Q96A33 483 aaKnown RBP17.07■□□□□ 0.32
RPP40-207ENST00000618533 ACAP3Q96P50 834 aa17.07■□□□□ 0.32
RPP40-207ENST00000618533 GOLPH3LQ9H4A5 285 aa17.07■□□□□ 0.32
RPP40-207ENST00000618533 NRDE2Q9H7Z3 1164 aa17.07■□□□□ 0.32
RPP40-207ENST00000618533 SPG21Q9NZD8 308 aa17.07■□□□□ 0.32
RPP40-207ENST00000618533 ANKFY1Q9P2R3 1169 aa17.07■□□□□ 0.32
RPP40-207ENST00000618533 MTCH2Q9Y6C9 303 aa17.07■□□□□ 0.32
RPP40-207ENST00000618533 PRRC2BQ5JSZ5 2229 aaKnown RBP17.06■□□□□ 0.32
RPP40-207ENST00000618533 PDCD11Q14690 1871 aaKnown RBP17.06■□□□□ 0.32
RPP40-207ENST00000618533 CDH23Q9H251 3354 aa17.06■□□□□ 0.32
RPP40-207ENST00000618533 ZC3H11AO75152 810 aaKnown RBP eCLIP17.06■□□□□ 0.32
RPP40-207ENST00000618533 FGF18O76093 207 aa17.06■□□□□ 0.32
RPP40-207ENST00000618533 POMCP01189 267 aa17.06■□□□□ 0.32
RPP40-207ENST00000618533 ITGB1P05556 798 aa17.06■□□□□ 0.32
RPP40-207ENST00000618533 MATR3P43243 847 aaKnown RBP eCLIP17.06■□□□□ 0.32
RPP40-207ENST00000618533 SCNN1GP51170 649 aa17.06■□□□□ 0.32
RPP40-207ENST00000618533 BCAR1P56945 870 aa17.06■□□□□ 0.32
RPP40-207ENST00000618533 POU5F1Q01860 360 aaKnown RBP17.06■□□□□ 0.32
RPP40-207ENST00000618533 KRT17Q04695 432 aa17.06■□□□□ 0.32
RPP40-207ENST00000618533 FAM160A1Q05DH4 1040 aa17.06■□□□□ 0.32
RPP40-207ENST00000618533 DSC1Q08554 894 aa17.06■□□□□ 0.32
RPP40-207ENST00000618533 PSMD2Q13200 908 aa17.06■□□□□ 0.32
RPP40-207ENST00000618533 CUL4BQ13620 913 aa17.06■□□□□ 0.32
RPP40-207ENST00000618533 TIGD5Q53EQ6 642 aa17.06■□□□□ 0.32
RPP40-207ENST00000618533 PDE12Q6L8Q7 609 aaKnown RBP17.06■□□□□ 0.32
RPP40-207ENST00000618533 ZBTB33Q86T24 672 aa17.06■□□□□ 0.32
RPP40-207ENST00000618533 SLC39A11Q8N1S5 342 aa17.06■□□□□ 0.32
RPP40-207ENST00000618533 GSTCDQ8NEC7 633 aa17.06■□□□□ 0.32
RPP40-207ENST00000618533 ZFP42Q96MM3 310 aa17.06■□□□□ 0.32
RPP40-207ENST00000618533 TIGD1Q96MW7 591 aa17.06■□□□□ 0.32
RPP40-207ENST00000618533 BLZF1Q9H2G9 400 aa17.06■□□□□ 0.32
RPP40-207ENST00000618533 TSHZ2Q9NRE2 1034 aa17.06■□□□□ 0.32
RPP40-207ENST00000618533 TBC1D7Q9P0N9 293 aa17.06■□□□□ 0.32
RPP40-207ENST00000618533 HCSTQ9UBK5 93 aa17.06■□□□□ 0.32
RPP40-207ENST00000618533 PUF60Q9UHX1 559 aaKnown RBP17.06■□□□□ 0.32
RPP40-207ENST00000618533 GDAQ9Y2T3 454 aa17.06■□□□□ 0.32
RPP40-207ENST00000618533 STYXL1Q9Y6J8 313 aa17.06■□□□□ 0.32
RPP40-207ENST00000618533 A0A0B4J269 797 aa17.05■□□□□ 0.32
RPP40-207ENST00000618533 OGTO15294 1046 aa17.05■□□□□ 0.32
RPP40-207ENST00000618533 ALDH2P05091 517 aa17.05■□□□□ 0.32
RPP40-207ENST00000618533 THP07101 528 aa17.05■□□□□ 0.32
RPP40-207ENST00000618533 GALTP07902 379 aa17.05■□□□□ 0.32
RPP40-207ENST00000618533 CLTAP09496 248 aa17.05■□□□□ 0.32
RPP40-207ENST00000618533 XKR4Q5GH76 650 aa17.05■□□□□ 0.32
RPP40-207ENST00000618533 COLGALT2Q8IYK4 626 aa17.05■□□□□ 0.32
RPP40-207ENST00000618533 FMR1NBQ8N0W7 255 aaPredicted RBP17.05■□□□□ 0.32
RPP40-207ENST00000618533 MAFAQ8NHW3 353 aaPredicted RBP17.05■□□□□ 0.32
RPP40-207ENST00000618533 SPPL3Q8TCT6 385 aa17.05■□□□□ 0.32
RPP40-207ENST00000618533 TMEM169Q96HH4 297 aa17.05■□□□□ 0.32
RPP40-207ENST00000618533 ZBTB45Q96K62 511 aaPredicted RBP17.05■□□□□ 0.32
RPP40-207ENST00000618533 TSPAN18Q96SJ8 248 aa17.05■□□□□ 0.32
RPP40-207ENST00000618533 PLEKHA5Q9HAU0 1116 aa17.05■□□□□ 0.32
RPP40-207ENST00000618533 HOOK1Q9UJC3 728 aaKnown RBP17.05■□□□□ 0.32
RPP40-207ENST00000618533 ATG2AQ2TAZ0 1938 aa17.04■□□□□ 0.32
RPP40-207ENST00000618533 KIAA0391O15091 583 aaKnown RBP17.04■□□□□ 0.32
RPP40-207ENST00000618533 GRM6O15303 877 aa17.04■□□□□ 0.32
RPP40-207ENST00000618533 DDHD2O94830 711 aa17.04■□□□□ 0.32
RPP40-207ENST00000618533 MYBP10242 640 aa17.04■□□□□ 0.32
RPP40-207ENST00000618533 AFF1P51825 1210 aaKnown RBP17.04■□□□□ 0.32
RPP40-207ENST00000618533 CASP5P51878 434 aa17.04■□□□□ 0.32
RPP40-207ENST00000618533 SNRPFP62306 86 aaKnown RBP17.04■□□□□ 0.32
RPP40-207ENST00000618533 TUSC3Q13454 348 aa17.04■□□□□ 0.32
RPP40-207ENST00000618533 SLC39A4Q6P5W5 647 aa17.04■□□□□ 0.32
RPP40-207ENST00000618533 ALKAL1Q6UXT8 129 aa17.04■□□□□ 0.32
RPP40-207ENST00000618533 CLEC17AQ6ZS10 378 aa17.04■□□□□ 0.32
RPP40-207ENST00000618533 EPM2AIP1Q7L775 607 aaPredicted RBP17.04■□□□□ 0.32
RPP40-207ENST00000618533 ZNF280BQ86YH2 543 aa17.04■□□□□ 0.32
RPP40-207ENST00000618533 ELOA2Q8IYF1 753 aaPredicted RBP17.04■□□□□ 0.32
RPP40-207ENST00000618533 SYCP3Q8IZU3 236 aa17.04■□□□□ 0.32
RPP40-207ENST00000618533 CEP120Q8N960 986 aa17.04■□□□□ 0.32
RPP40-207ENST00000618533 ENGASEQ8NFI3 743 aa17.04■□□□□ 0.32
RPP40-207ENST00000618533 PPP2R3CQ969Q6 453 aa17.04■□□□□ 0.32
RPP40-207ENST00000618533 SNX27Q96L92 541 aa17.04■□□□□ 0.32
RPP40-207ENST00000618533 MSTO1Q9BUK6 570 aa17.04■□□□□ 0.32
RPP40-207ENST00000618533 GBP3Q9H0R5 595 aa17.04■□□□□ 0.32
RPP40-207ENST00000618533 EXOC1Q9NV70 894 aa17.04■□□□□ 0.32
RPP40-207ENST00000618533 SLC38A7Q9NVC3 462 aa17.04■□□□□ 0.32
RPP40-207ENST00000618533 MIOSQ9NXC5 875 aa17.04■□□□□ 0.32
RPP40-207ENST00000618533 KLK14Q9P0G3 267 aa17.04■□□□□ 0.32
RPP40-207ENST00000618533 FAN1Q9Y2M0 1017 aa17.04■□□□□ 0.32
RPP40-207ENST00000618533 PTGESO14684 152 aa17.03■□□□□ 0.32
RPP40-207ENST00000618533 KLRC4O43908 158 aa17.03■□□□□ 0.32
RPP40-207ENST00000618533 HARSP12081 509 aaKnown RBP17.03■□□□□ 0.32
RPP40-207ENST00000618533 KCNE1P15382 129 aa17.03■□□□□ 0.32
RPP40-207ENST00000618533 GARTP22102 1010 aa17.03■□□□□ 0.32
RPP40-207ENST00000618533 SLC11A1P49279 550 aa17.03■□□□□ 0.32
RPP40-207ENST00000618533 SNW1Q13573 536 aaKnown RBP17.03■□□□□ 0.32
RPP40-207ENST00000618533 HSP90AA2PQ14568 343 aaPredicted RBP17.03■□□□□ 0.32
RPP40-207ENST00000618533 BMS1Q14692 1282 aaKnown RBP17.03■□□□□ 0.32
RPP40-207ENST00000618533 BMT2Q1RMZ1 405 aa17.03■□□□□ 0.32
RPP40-207ENST00000618533 CD302Q8IX05 232 aa17.03■□□□□ 0.32
RPP40-207ENST00000618533 GRAMD1CQ8IYS0 662 aa17.03■□□□□ 0.32
RPP40-207ENST00000618533 ZNF507Q8TCN5 953 aa17.03■□□□□ 0.32
RPP40-207ENST00000618533 POF1BQ8WVV4 589 aa17.03■□□□□ 0.32
RPP40-207ENST00000618533 IGSF21Q96ID5 467 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms