RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 TOM1L1O75674 476 aa27.3■■□□□ 1.96
PMS1-220ENST00000618056 MCF2P10911 925 aa27.3■■□□□ 1.96
PMS1-220ENST00000618056 SMC1AQ14683 1233 aaKnown RBP27.3■■□□□ 1.96
PMS1-220ENST00000618056 MPZL3Q6UWV2 235 aa27.3■■□□□ 1.96
PMS1-220ENST00000618056 VPS52Q8N1B4 723 aa27.3■■□□□ 1.96
PMS1-220ENST00000618056 ZBP1Q9H171 429 aa27.3■■□□□ 1.96
PMS1-220ENST00000618056 PDCD11Q14690 1871 aaKnown RBP27.29■■□□□ 1.96
PMS1-220ENST00000618056 PTGESO14684 152 aa27.29■■□□□ 1.96
PMS1-220ENST00000618056 ABCD1P33897 745 aa27.29■■□□□ 1.96
PMS1-220ENST00000618056 GRM5P41594 1212 aa27.29■■□□□ 1.96
PMS1-220ENST00000618056 BMS1Q14692 1282 aaKnown RBP27.29■■□□□ 1.96
PMS1-220ENST00000618056 DUSP6Q16828 381 aa27.29■■□□□ 1.96
PMS1-220ENST00000618056 SHC4Q6S5L8 630 aa27.29■■□□□ 1.96
PMS1-220ENST00000618056 RBM23Q86U06 439 aaKnown RBP27.29■■□□□ 1.96
PMS1-220ENST00000618056 MRPL43Q8N983 215 aaKnown RBP27.29■■□□□ 1.96
PMS1-220ENST00000618056 DDX12PQ92771 950 aa27.29■■□□□ 1.96
PMS1-220ENST00000618056 VN1R3Q9BXE9 311 aa27.29■■□□□ 1.96
PMS1-220ENST00000618056 PANK2Q9BZ23 570 aa27.29■■□□□ 1.96
PMS1-220ENST00000618056 MARCH5Q9NX47 278 aa27.29■■□□□ 1.96
PMS1-220ENST00000618056 RCOR1Q9UKL0 485 aa27.29■■□□□ 1.96
PMS1-220ENST00000618056 GDAQ9Y2T3 454 aa27.29■■□□□ 1.96
PMS1-220ENST00000618056 IRAK3Q9Y616 596 aa27.29■■□□□ 1.96
PMS1-220ENST00000618056 MYMKA6NI61 221 aa27.28■■□□□ 1.96
PMS1-220ENST00000618056 HIDE1A8MVS5 230 aa27.28■■□□□ 1.96
PMS1-220ENST00000618056 K7ENM7 598 aa27.28■■□□□ 1.96
PMS1-220ENST00000618056 DLL1O00548 723 aa27.28■■□□□ 1.96
PMS1-220ENST00000618056 NR1I2O75469 434 aa27.28■■□□□ 1.96
PMS1-220ENST00000618056 OR1G1P47890 313 aa27.28■■□□□ 1.96
PMS1-220ENST00000618056 EP400NLQ6ZTU2 488 aa27.28■■□□□ 1.96
PMS1-220ENST00000618056 FAM178BQ8IXR5 827 aa27.28■■□□□ 1.96
PMS1-220ENST00000618056 PDILTQ8N807 584 aa27.28■■□□□ 1.96
PMS1-220ENST00000618056 DNAJC19Q96DA6 116 aa27.28■■□□□ 1.96
PMS1-220ENST00000618056 TCHPQ9BT92 498 aa27.28■■□□□ 1.96
PMS1-220ENST00000618056 C2orf71A6NGG8 1288 aa27.27■■□□□ 1.96
PMS1-220ENST00000618056 LINC01565O15544 149 aa27.27■■□□□ 1.96
PMS1-220ENST00000618056 CTSAP10619 480 aa27.27■■□□□ 1.96
PMS1-220ENST00000618056 E2F4Q16254 413 aa27.27■■□□□ 1.96
PMS1-220ENST00000618056 DYMQ7RTS9 669 aa27.27■■□□□ 1.96
PMS1-220ENST00000618056 CCDC94Q9BW85 323 aaPredicted RBP27.27■■□□□ 1.96
PMS1-220ENST00000618056 ST6GALNAC4Q9H4F1 302 aa27.27■■□□□ 1.96
PMS1-220ENST00000618056 ZHX3Q9H4I2 956 aa27.27■■□□□ 1.96
PMS1-220ENST00000618056 TBX20Q9UMR3 447 aa27.27■■□□□ 1.96
PMS1-220ENST00000618056 PCDHA7Q9UN72 937 aa27.27■■□□□ 1.96
PMS1-220ENST00000618056 PRG3Q9Y2Y8 225 aaPredicted RBP27.27■■□□□ 1.96
PMS1-220ENST00000618056 H3BQ06 376 aaPredicted RBP27.26■■□□□ 1.95
PMS1-220ENST00000618056 TBX10O75333 385 aa27.26■■□□□ 1.95
PMS1-220ENST00000618056 EFEMP2O95967 443 aa27.26■■□□□ 1.95
PMS1-220ENST00000618056 THP07101 528 aa27.26■■□□□ 1.95
PMS1-220ENST00000618056 ME1P48163 572 aa27.26■■□□□ 1.95
PMS1-220ENST00000618056 GTF2BQ00403 316 aa27.26■■□□□ 1.95
PMS1-220ENST00000618056 DLX2Q07687 328 aaPredicted RBP27.26■■□□□ 1.95
PMS1-220ENST00000618056 TUSC3Q13454 348 aa27.26■■□□□ 1.95
PMS1-220ENST00000618056 NOLC1Q14978 699 aaKnown RBP eCLIP27.26■■□□□ 1.95
PMS1-220ENST00000618056 PUS10Q3MIT2 529 aaKnown RBP27.26■■□□□ 1.95
PMS1-220ENST00000618056 ZBTB33Q86T24 672 aa27.26■■□□□ 1.95
PMS1-220ENST00000618056 CEP120Q8N960 986 aa27.26■■□□□ 1.95
PMS1-220ENST00000618056 GADD45GIP1Q8TAE8 222 aaPredicted RBP27.26■■□□□ 1.95
PMS1-220ENST00000618056 ZBTB45Q96K62 511 aaPredicted RBP27.26■■□□□ 1.95
PMS1-220ENST00000618056 CUEDC2Q9H467 287 aa27.26■■□□□ 1.95
PMS1-220ENST00000618056 TOPORSQ9NS56 1045 aaPredicted RBP27.26■■□□□ 1.95
PMS1-220ENST00000618056 SEL1LQ9UBV2 794 aa27.26■■□□□ 1.95
PMS1-220ENST00000618056 PER2O15055 1255 aa27.25■■□□□ 1.95
PMS1-220ENST00000618056 PIGRP01833 764 aa27.25■■□□□ 1.95
PMS1-220ENST00000618056 NAB2Q15742 525 aa27.25■■□□□ 1.95
PMS1-220ENST00000618056 RNF168Q8IYW5 571 aaPredicted RBP27.25■■□□□ 1.95
PMS1-220ENST00000618056 ADAMTS19Q8TE59 1207 aa27.25■■□□□ 1.95
PMS1-220ENST00000618056 COLEC11Q9BWP8 271 aa27.25■■□□□ 1.95
PMS1-220ENST00000618056 CXCL16Q9H2A7 254 aa27.25■■□□□ 1.95
PMS1-220ENST00000618056 CXCL14O95715 111 aa27.25■■□□□ 1.95
PMS1-220ENST00000618056 GLP2RO95838 553 aa27.25■■□□□ 1.95
PMS1-220ENST00000618056 GAP43P17677 238 aa27.25■■□□□ 1.95
PMS1-220ENST00000618056 YARSP54577 528 aaKnown RBP27.25■■□□□ 1.95
PMS1-220ENST00000618056 MCL1Q07820 350 aa27.25■■□□□ 1.95
PMS1-220ENST00000618056 KCNC3Q14003 757 aa27.25■■□□□ 1.95
PMS1-220ENST00000618056 XKR4Q5GH76 650 aa27.25■■□□□ 1.95
PMS1-220ENST00000618056 ALKAL1Q6UXT8 129 aa27.25■■□□□ 1.95
PMS1-220ENST00000618056 TNMDQ9H2S6 317 aa27.25■■□□□ 1.95
PMS1-220ENST00000618056 ANKFY1Q9P2R3 1169 aa27.25■■□□□ 1.95
PMS1-220ENST00000618056 CLDN3O15551 220 aa27.24■■□□□ 1.95
PMS1-220ENST00000618056 NMT1P30419 496 aaKnown RBP27.24■■□□□ 1.95
PMS1-220ENST00000618056 NDUFV1P49821 464 aa27.24■■□□□ 1.95
PMS1-220ENST00000618056 SFR1Q86XK3 245 aa27.24■■□□□ 1.95
PMS1-220ENST00000618056 IQUBQ8NA54 791 aa27.24■■□□□ 1.95
PMS1-220ENST00000618056 BICD1Q96G01 975 aa27.24■■□□□ 1.95
PMS1-220ENST00000618056 MSLNLQ96KJ4 702 aa27.24■■□□□ 1.95
PMS1-220ENST00000618056 KBTBD4Q9NVX7 518 aa27.24■■□□□ 1.95
PMS1-220ENST00000618056 CLEC1BQ9P126 229 aa27.24■■□□□ 1.95
PMS1-220ENST00000618056 ATP6V1DQ9Y5K8 247 aa27.24■■□□□ 1.95
PMS1-220ENST00000618056 FRMD3A2A2Y4 597 aa27.23■■□□□ 1.95
PMS1-220ENST00000618056 HNRNPDLO14979 420 aaKnown RBP27.23■■□□□ 1.95
PMS1-220ENST00000618056 SOD2P04179 222 aa27.23■■□□□ 1.95
PMS1-220ENST00000618056 RESP18Q5W5W9 173 aa27.23■■□□□ 1.95
PMS1-220ENST00000618056 PTCRAQ6ISU1 281 aaPredicted RBP27.23■■□□□ 1.95
PMS1-220ENST00000618056 TMEM184AQ6ZMB5 413 aa27.23■■□□□ 1.95
PMS1-220ENST00000618056 ZNF720Q7Z2F6 126 aa27.23■■□□□ 1.95
PMS1-220ENST00000618056 MAP4K3Q8IVH8 894 aa27.23■■□□□ 1.95
PMS1-220ENST00000618056 ACAP3Q96P50 834 aa27.23■■□□□ 1.95
PMS1-220ENST00000618056 PPP1R10Q96QC0 940 aaKnown RBP27.23■■□□□ 1.95
PMS1-220ENST00000618056 HERC2P3Q9BVR0 1158 aa27.23■■□□□ 1.95
PMS1-220ENST00000618056 LRRC27Q9C0I9 530 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms