RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 RNPEPQ9H4A4 650 aa18.73■□□□□ 0.59
PCDHGC3-205ENST00000617641 VTA1Q9NP79 307 aa18.73■□□□□ 0.59
PCDHGC3-205ENST00000617641 RBAKQ9NYW8 714 aaPredicted RBP18.73■□□□□ 0.59
PCDHGC3-205ENST00000617641 SMARCAL1Q9NZC9 954 aa18.73■□□□□ 0.59
PCDHGC3-205ENST00000617641 EHD2Q9NZN4 543 aa18.73■□□□□ 0.59
PCDHGC3-205ENST00000617641 ADGRA2Q96PE1 1338 aa18.72■□□□□ 0.59
PCDHGC3-205ENST00000617641 ZBTB48P10074 688 aaPredicted RBP18.72■□□□□ 0.59
PCDHGC3-205ENST00000617641 ADCYAP1R1P41586 468 aa18.72■□□□□ 0.59
PCDHGC3-205ENST00000617641 EFNA5P52803 228 aa18.72■□□□□ 0.59
PCDHGC3-205ENST00000617641 CLDN10P78369 228 aa18.72■□□□□ 0.59
PCDHGC3-205ENST00000617641 PRPF4BQ13523 1007 aaKnown RBP18.72■□□□□ 0.59
PCDHGC3-205ENST00000617641 MXD4Q14582 209 aaPredicted RBP18.72■□□□□ 0.59
PCDHGC3-205ENST00000617641 CDCA2Q69YH5 1023 aaPredicted RBP18.72■□□□□ 0.59
PCDHGC3-205ENST00000617641 TMCO3Q6UWJ1 677 aa18.72■□□□□ 0.59
PCDHGC3-205ENST00000617641 RHPN2Q8IUC4 686 aa18.72■□□□□ 0.59
PCDHGC3-205ENST00000617641 PARK7Q99497 189 aaKnown RBP18.72■□□□□ 0.59
PCDHGC3-205ENST00000617641 ACP6Q9NPH0 428 aa18.72■□□□□ 0.59
PCDHGC3-205ENST00000617641 SUCLA2Q9P2R7 463 aaPredicted RBP18.72■□□□□ 0.59
PCDHGC3-205ENST00000617641 TSKSQ9UJT2 592 aa18.72■□□□□ 0.59
PCDHGC3-205ENST00000617641 SPDYE4A6NLX3 237 aa18.72■□□□□ 0.59
PCDHGC3-205ENST00000617641 CYP26A1O43174 497 aa18.72■□□□□ 0.59
PCDHGC3-205ENST00000617641 HBP1O60381 514 aa18.72■□□□□ 0.59
PCDHGC3-205ENST00000617641 MSCO60682 206 aa18.72■□□□□ 0.59
PCDHGC3-205ENST00000617641 SNAI1O95863 264 aaPredicted RBP18.72■□□□□ 0.59
PCDHGC3-205ENST00000617641 ABCB4P21439 1286 aa18.72■□□□□ 0.59
PCDHGC3-205ENST00000617641 C2orf54Q08AI8 447 aa18.72■□□□□ 0.59
PCDHGC3-205ENST00000617641 LAMC2Q13753 1193 aa18.72■□□□□ 0.59
PCDHGC3-205ENST00000617641 DPP9Q86TI2 863 aa18.72■□□□□ 0.59
PCDHGC3-205ENST00000617641 RPUSD2Q8IZ73 545 aaKnown RBP18.72■□□□□ 0.59
PCDHGC3-205ENST00000617641 KATNBL1Q9H079 304 aa18.72■□□□□ 0.59
PCDHGC3-205ENST00000617641 A0A0A6YYK5 440 aaPredicted RBP18.71■□□□□ 0.59
PCDHGC3-205ENST00000617641 GH1P01241 217 aa18.71■□□□□ 0.59
PCDHGC3-205ENST00000617641 LGALS2P05162 132 aa18.71■□□□□ 0.59
PCDHGC3-205ENST00000617641 CLCN3P51790 818 aa18.71■□□□□ 0.59
PCDHGC3-205ENST00000617641 IFI16Q16666 785 aaKnown RBP18.71■□□□□ 0.59
PCDHGC3-205ENST00000617641 TDRD10Q5VZ19 366 aaKnown RBP18.71■□□□□ 0.59
PCDHGC3-205ENST00000617641 CST9Q5W186 159 aa18.71■□□□□ 0.59
PCDHGC3-205ENST00000617641 EXOC8Q8IYI6 725 aa18.71■□□□□ 0.59
PCDHGC3-205ENST00000617641 LRRC57Q8N9N7 239 aa18.71■□□□□ 0.59
PCDHGC3-205ENST00000617641 TPCN2Q8NHX9 752 aa18.71■□□□□ 0.59
PCDHGC3-205ENST00000617641 EPS8L1Q8TE68 723 aa18.71■□□□□ 0.59
PCDHGC3-205ENST00000617641 DHX38Q92620 1227 aaKnown RBP18.71■□□□□ 0.59
PCDHGC3-205ENST00000617641 RPGRIP1Q96KN7 1286 aa18.71■□□□□ 0.59
PCDHGC3-205ENST00000617641 ERAP1Q9NZ08 941 aa18.71■□□□□ 0.59
PCDHGC3-205ENST00000617641 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.71■□□□□ 0.58
PCDHGC3-205ENST00000617641 LDHAP00338 332 aaKnown RBP18.71■□□□□ 0.58
PCDHGC3-205ENST00000617641 PRKCBP05771 671 aa18.71■□□□□ 0.58
PCDHGC3-205ENST00000617641 IGBP1P78318 339 aa18.71■□□□□ 0.58
PCDHGC3-205ENST00000617641 GRB14Q14449 540 aa18.71■□□□□ 0.58
PCDHGC3-205ENST00000617641 PTPROQ16827 1216 aa18.71■□□□□ 0.58
PCDHGC3-205ENST00000617641 ZACNQ401N2 412 aa18.71■□□□□ 0.58
PCDHGC3-205ENST00000617641 TAF3Q5VWG9 929 aa18.71■□□□□ 0.58
PCDHGC3-205ENST00000617641 EFCAB12Q6NXP0 572 aa18.71■□□□□ 0.58
PCDHGC3-205ENST00000617641 CC2D1AQ6P1N0 951 aaPredicted RBP18.71■□□□□ 0.58
PCDHGC3-205ENST00000617641 ZPBP2Q6X784 338 aa18.71■□□□□ 0.58
PCDHGC3-205ENST00000617641 ZNF467Q7Z7K2 595 aaPredicted RBP18.71■□□□□ 0.58
PCDHGC3-205ENST00000617641 ZBTB33Q86T24 672 aa18.71■□□□□ 0.58
PCDHGC3-205ENST00000617641 NOP9Q86U38 636 aaKnown RBP18.71■□□□□ 0.58
PCDHGC3-205ENST00000617641 SLC47A2Q86VL8 602 aa18.71■□□□□ 0.58
PCDHGC3-205ENST00000617641 ZBTB8OSQ8IWT0 167 aa18.71■□□□□ 0.58
PCDHGC3-205ENST00000617641 METTL13Q8N6R0 699 aa18.71■□□□□ 0.58
PCDHGC3-205ENST00000617641 AFG1LQ8WV93 481 aa18.71■□□□□ 0.58
PCDHGC3-205ENST00000617641 MRPL4Q9BYD3 311 aaKnown RBP18.71■□□□□ 0.58
PCDHGC3-205ENST00000617641 NOCTQ9UK39 431 aaKnown RBP18.71■□□□□ 0.58
PCDHGC3-205ENST00000617641 RBM47A0AV96 593 aaKnown RBP18.7■□□□□ 0.58
PCDHGC3-205ENST00000617641 CLDN3O15551 220 aa18.7■□□□□ 0.58
PCDHGC3-205ENST00000617641 ECM2O94769 699 aaPredicted RBP18.7■□□□□ 0.58
PCDHGC3-205ENST00000617641 C4BPAP04003 597 aaKnown RBP18.7■□□□□ 0.58
PCDHGC3-205ENST00000617641 TMEM253P0C7T8 217 aa18.7■□□□□ 0.58
PCDHGC3-205ENST00000617641 MS4A14Q96JA4 679 aa18.7■□□□□ 0.58
PCDHGC3-205ENST00000617641 NLRP4Q96MN2 994 aa18.7■□□□□ 0.58
PCDHGC3-205ENST00000617641 JPH2Q9BR39 696 aaPredicted RBP18.7■□□□□ 0.58
PCDHGC3-205ENST00000617641 RAB21Q9UL25 225 aa18.7■□□□□ 0.58
PCDHGC3-205ENST00000617641 NCANO14594 1321 aa18.7■□□□□ 0.58
PCDHGC3-205ENST00000617641 ZRANB2O95218 330 aaKnown RBP eCLIP18.69■□□□□ 0.58
PCDHGC3-205ENST00000617641 HLA-DRAP01903 254 aa18.69■□□□□ 0.58
PCDHGC3-205ENST00000617641 CHRNB2P17787 502 aa18.69■□□□□ 0.58
PCDHGC3-205ENST00000617641 BIRC3Q13489 604 aa18.69■□□□□ 0.58
PCDHGC3-205ENST00000617641 MAPK6Q16659 721 aa18.69■□□□□ 0.58
PCDHGC3-205ENST00000617641 FAM110CQ1W6H9 321 aa18.69■□□□□ 0.58
PCDHGC3-205ENST00000617641 CCDC181Q5TID7 509 aa18.69■□□□□ 0.58
PCDHGC3-205ENST00000617641 ZNF572Q7Z3I7 529 aaPredicted RBP18.69■□□□□ 0.58
PCDHGC3-205ENST00000617641 CTNNBL1Q8WYA6 563 aaPredicted RBP18.69■□□□□ 0.58
PCDHGC3-205ENST00000617641 ARHGEF26Q96DR7 871 aa18.69■□□□□ 0.58
PCDHGC3-205ENST00000617641 MAML3Q96JK9 1138 aa18.69■□□□□ 0.58
PCDHGC3-205ENST00000617641 ACO2Q99798 780 aaKnown RBP18.69■□□□□ 0.58
PCDHGC3-205ENST00000617641 TCHPQ9BT92 498 aa18.69■□□□□ 0.58
PCDHGC3-205ENST00000617641 OSGEPQ9NPF4 335 aa18.69■□□□□ 0.58
PCDHGC3-205ENST00000617641 CNTNAP2Q9UHC6 1331 aa18.69■□□□□ 0.58
PCDHGC3-205ENST00000617641 ZNF286BP0CG31 522 aa18.69■□□□□ 0.58
PCDHGC3-205ENST00000617641 INSRRP14616 1297 aa18.69■□□□□ 0.58
PCDHGC3-205ENST00000617641 TNFSF9P41273 254 aa18.69■□□□□ 0.58
PCDHGC3-205ENST00000617641 PIK3CAP42336 1068 aa18.69■□□□□ 0.58
PCDHGC3-205ENST00000617641 VSNL1P62760 191 aa18.69■□□□□ 0.58
PCDHGC3-205ENST00000617641 PLEKHH3Q7Z736 793 aa18.69■□□□□ 0.58
PCDHGC3-205ENST00000617641 PPTC7Q8NI37 304 aa18.69■□□□□ 0.58
PCDHGC3-205ENST00000617641 PCDHB18PQ96TA0 734 aa18.69■□□□□ 0.58
PCDHGC3-205ENST00000617641 THAP2Q9H0W7 228 aa18.69■□□□□ 0.58
PCDHGC3-205ENST00000617641 CCDC151A5D8V7 595 aa18.68■□□□□ 0.58
PCDHGC3-205ENST00000617641 TOM1L1O75674 476 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms