RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 STAMBPL1Q96FJ0 436 aa15.54■□□□□ 0.08
SHROOM1-208ENST00000617339 TBC1D22BQ9NU19 505 aa15.54■□□□□ 0.08
SHROOM1-208ENST00000617339 GGT7Q9UJ14 662 aa15.54■□□□□ 0.08
SHROOM1-208ENST00000617339 TRPC6Q9Y210 931 aa15.54■□□□□ 0.08
SHROOM1-208ENST00000617339 FGGP02679 453 aa15.54■□□□□ 0.08
SHROOM1-208ENST00000617339 CCNHP51946 323 aaPredicted RBP15.54■□□□□ 0.08
SHROOM1-208ENST00000617339 ACTR2P61160 394 aa15.54■□□□□ 0.08
SHROOM1-208ENST00000617339 KCTD2Q14681 263 aa15.54■□□□□ 0.08
SHROOM1-208ENST00000617339 TRAPPC12Q8WVT3 735 aa15.54■□□□□ 0.08
SHROOM1-208ENST00000617339 TACO1Q9BSH4 297 aaKnown RBP15.54■□□□□ 0.08
SHROOM1-208ENST00000617339 JPH1Q9HDC5 661 aaPredicted RBP15.54■□□□□ 0.08
SHROOM1-208ENST00000617339 PTPN22Q9Y2R2 807 aa15.54■□□□□ 0.08
SHROOM1-208ENST00000617339 NR2E1Q9Y466 385 aa15.54■□□□□ 0.08
SHROOM1-208ENST00000617339 L3MBTL1Q9Y468 752 aa15.54■□□□□ 0.08
SHROOM1-208ENST00000617339 UBIAD1Q9Y5Z9 338 aa15.54■□□□□ 0.08
SHROOM1-208ENST00000617339 RAD51CO43502 376 aa15.53■□□□□ 0.08
SHROOM1-208ENST00000617339 LIG4P49917 911 aa15.53■□□□□ 0.08
SHROOM1-208ENST00000617339 CDK17Q00537 523 aa15.53■□□□□ 0.08
SHROOM1-208ENST00000617339 LY6KQ17RY6 165 aa15.53■□□□□ 0.08
SHROOM1-208ENST00000617339 DCDC2CA8MYV0 355 aa15.53■□□□□ 0.08
SHROOM1-208ENST00000617339 SCARA3Q6AZY7 606 aa15.53■□□□□ 0.08
SHROOM1-208ENST00000617339 SEMA4DQ92854 862 aa15.53■□□□□ 0.08
SHROOM1-208ENST00000617339 MOV10L1Q9BXT6 1211 aaKnown RBP15.53■□□□□ 0.08
SHROOM1-208ENST00000617339 POLR3FQ9H1D9 316 aaPredicted RBP15.53■□□□□ 0.08
SHROOM1-208ENST00000617339 AZI2Q9H6S1 392 aa15.53■□□□□ 0.08
SHROOM1-208ENST00000617339 RNF19AQ9NV58 838 aa15.53■□□□□ 0.08
SHROOM1-208ENST00000617339 HMGB1P1B2RPK0 211 aaPredicted RBP15.53■□□□□ 0.08
SHROOM1-208ENST00000617339 VPS41P49754 854 aa15.53■□□□□ 0.08
SHROOM1-208ENST00000617339 Q3C1V9 767 aa15.53■□□□□ 0.08
SHROOM1-208ENST00000617339 TBC1D1Q86TI0 1168 aaPredicted RBP15.53■□□□□ 0.08
SHROOM1-208ENST00000617339 FNBP1Q96RU3 617 aa15.53■□□□□ 0.08
SHROOM1-208ENST00000617339 TEX13BQ9BXU2 312 aa15.53■□□□□ 0.08
SHROOM1-208ENST00000617339 SLC9A2Q9UBY0 812 aa15.53■□□□□ 0.08
SHROOM1-208ENST00000617339 PGAP2Q9UHJ9 254 aa15.53■□□□□ 0.08
SHROOM1-208ENST00000617339 USTQ9Y2C2 406 aa15.53■□□□□ 0.08
SHROOM1-208ENST00000617339 IRF6O14896 467 aa15.52■□□□□ 0.08
SHROOM1-208ENST00000617339 RGS20O76081 388 aa15.52■□□□□ 0.08
SHROOM1-208ENST00000617339 ADSSP30520 456 aa15.52■□□□□ 0.08
SHROOM1-208ENST00000617339 DRP2Q13474 957 aa15.52■□□□□ 0.08
SHROOM1-208ENST00000617339 VGLL4Q14135 290 aa15.52■□□□□ 0.08
SHROOM1-208ENST00000617339 FAM133BQ5BKY9 247 aaKnown RBP15.52■□□□□ 0.08
SHROOM1-208ENST00000617339 ZBTB41Q5SVQ8 909 aa15.52■□□□□ 0.08
SHROOM1-208ENST00000617339 VSIG10LQ86VR7 867 aa15.52■□□□□ 0.08
SHROOM1-208ENST00000617339 VTI1AQ96AJ9 217 aa15.52■□□□□ 0.08
SHROOM1-208ENST00000617339 TARS2Q9BW92 718 aaKnown RBP15.52■□□□□ 0.08
SHROOM1-208ENST00000617339 TMEM117Q9H0C3 514 aa15.52■□□□□ 0.08
SHROOM1-208ENST00000617339 CNOT8Q9UFF9 292 aaKnown RBP15.52■□□□□ 0.08
SHROOM1-208ENST00000617339 PPP1R12AO14974 1030 aaPredicted RBP15.52■□□□□ 0.07
SHROOM1-208ENST00000617339 MMEP08473 750 aa15.52■□□□□ 0.07
SHROOM1-208ENST00000617339 FERP16591 822 aa15.52■□□□□ 0.07
SHROOM1-208ENST00000617339 CD58P19256 250 aa15.52■□□□□ 0.07
SHROOM1-208ENST00000617339 MARCKSL1P49006 195 aa15.52■□□□□ 0.07
SHROOM1-208ENST00000617339 WLSQ5T9L3 541 aa15.52■□□□□ 0.07
SHROOM1-208ENST00000617339 FKBP1CQ5VVH2 108 aa15.52■□□□□ 0.07
SHROOM1-208ENST00000617339 YTHDF3Q7Z739 585 aaKnown RBP15.52■□□□□ 0.07
SHROOM1-208ENST00000617339 IFT74Q96LB3 600 aa15.52■□□□□ 0.07
SHROOM1-208ENST00000617339 ACTR5Q9H9F9 607 aaPredicted RBP15.52■□□□□ 0.07
SHROOM1-208ENST00000617339 TBX20Q9UMR3 447 aa15.52■□□□□ 0.07
SHROOM1-208ENST00000617339 NRXN2Q9P2S2 1712 aa15.52■□□□□ 0.07
SHROOM1-208ENST00000617339 BCRP11274 1271 aa15.51■□□□□ 0.07
SHROOM1-208ENST00000617339 MAGOHP61326 146 aaKnown RBP15.51■□□□□ 0.07
SHROOM1-208ENST00000617339 FMNL3Q8IVF7 1028 aa15.51■□□□□ 0.07
SHROOM1-208ENST00000617339 CPA5Q8WXQ8 436 aa15.51■□□□□ 0.07
SHROOM1-208ENST00000617339 RAPGEF5Q92565 580 aa15.51■□□□□ 0.07
SHROOM1-208ENST00000617339 MAGOHBQ96A72 148 aaKnown RBP15.51■□□□□ 0.07
SHROOM1-208ENST00000617339 SPDL1Q96EA4 605 aa15.51■□□□□ 0.07
SHROOM1-208ENST00000617339 DNAJC17Q9NVM6 304 aaKnown RBP15.51■□□□□ 0.07
SHROOM1-208ENST00000617339 ADGRA3Q8IWK6 1321 aa15.51■□□□□ 0.07
SHROOM1-208ENST00000617339 ENO4A6NNW6 628 aa15.51■□□□□ 0.07
SHROOM1-208ENST00000617339 KIF4AO95239 1232 aa15.51■□□□□ 0.07
SHROOM1-208ENST00000617339 GJB6O95452 261 aa15.51■□□□□ 0.07
SHROOM1-208ENST00000617339 HSD17B3P37058 310 aa15.51■□□□□ 0.07
SHROOM1-208ENST00000617339 SNX1Q13596 522 aa15.51■□□□□ 0.07
SHROOM1-208ENST00000617339 KRT71Q3SY84 523 aa15.51■□□□□ 0.07
SHROOM1-208ENST00000617339 OTUD6AQ7L8S5 288 aa15.51■□□□□ 0.07
SHROOM1-208ENST00000617339 ARFGAP2Q8N6H7 521 aa15.51■□□□□ 0.07
SHROOM1-208ENST00000617339 COPS5Q92905 334 aa15.51■□□□□ 0.07
SHROOM1-208ENST00000617339 RSRC1Q96IZ7 334 aaKnown RBP15.51■□□□□ 0.07
SHROOM1-208ENST00000617339 TRIM51Q9BSJ1 452 aa15.51■□□□□ 0.07
SHROOM1-208ENST00000617339 STK33Q9BYT3 514 aa15.51■□□□□ 0.07
SHROOM1-208ENST00000617339 ACAD9Q9H845 621 aa15.51■□□□□ 0.07
SHROOM1-208ENST00000617339 AMFRQ9UKV5 643 aa15.51■□□□□ 0.07
SHROOM1-208ENST00000617339 ZNF214Q9UL59 606 aaPredicted RBP15.51■□□□□ 0.07
SHROOM1-208ENST00000617339 MYH11P35749 1972 aa15.51■□□□□ 0.07
SHROOM1-208ENST00000617339 TLDC2A0PJX2 215 aa15.51■□□□□ 0.07
SHROOM1-208ENST00000617339 SPOPO43791 374 aa15.51■□□□□ 0.07
SHROOM1-208ENST00000617339 SARNPP82979 210 aaKnown RBP15.51■□□□□ 0.07
SHROOM1-208ENST00000617339 C6orf89Q6UWU4 347 aa15.51■□□□□ 0.07
SHROOM1-208ENST00000617339 DPP9Q86TI2 863 aa15.51■□□□□ 0.07
SHROOM1-208ENST00000617339 TPCN2Q8NHX9 752 aa15.51■□□□□ 0.07
SHROOM1-208ENST00000617339 NSMCE1Q8WV22 266 aa15.51■□□□□ 0.07
SHROOM1-208ENST00000617339 SELENOSQ9BQE4 189 aa15.51■□□□□ 0.07
SHROOM1-208ENST00000617339 KIF9Q9HAQ2 790 aa15.51■□□□□ 0.07
SHROOM1-208ENST00000617339 NOD2Q9HC29 1040 aa15.51■□□□□ 0.07
SHROOM1-208ENST00000617339 CYP39A1Q9NYL5 469 aa15.51■□□□□ 0.07
SHROOM1-208ENST00000617339 LTBP1Q14766 1721 aa15.5■□□□□ 0.07
SHROOM1-208ENST00000617339 ATXN2Q99700 1313 aaKnown RBP15.5■□□□□ 0.07
SHROOM1-208ENST00000617339 UPP2O95045 317 aa15.5■□□□□ 0.07
SHROOM1-208ENST00000617339 CCDC25Q86WR0 208 aa15.5■□□□□ 0.07
SHROOM1-208ENST00000617339 TAB3Q8N5C8 712 aaPredicted RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms