RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 KREMEN1Q96MU8 473 aa8.44□□□□□ -1.06
NEK3-207ENST00000617054 NAPGQ99747 312 aaPredicted RBP8.44□□□□□ -1.06
NEK3-207ENST00000617054 EDEM3Q9BZQ6 932 aa8.44□□□□□ -1.06
NEK3-207ENST00000617054 A0A087WZ62 844 aa8.43□□□□□ -1.06
NEK3-207ENST00000617054 SSU72P8A0A1W2PR75 194 aa8.43□□□□□ -1.06
NEK3-207ENST00000617054 GTPBP10A4D1E9 387 aaKnown RBP8.43□□□□□ -1.06
NEK3-207ENST00000617054 CYP26A1O43174 497 aa8.43□□□□□ -1.06
NEK3-207ENST00000617054 FTCDO95954 541 aa8.43□□□□□ -1.06
NEK3-207ENST00000617054 RFC5P40937 340 aa8.43□□□□□ -1.06
NEK3-207ENST00000617054 RTP1P59025 263 aa8.43□□□□□ -1.06
NEK3-207ENST00000617054 RNASE9P60153 205 aaKnown RBP8.43□□□□□ -1.06
NEK3-207ENST00000617054 TNFAIP2Q03169 654 aa8.43□□□□□ -1.06
NEK3-207ENST00000617054 PDAP1Q13442 181 aaKnown RBP8.43□□□□□ -1.06
NEK3-207ENST00000617054 BIRC3Q13489 604 aa8.43□□□□□ -1.06
NEK3-207ENST00000617054 TEX35Q5T0J7 233 aa8.43□□□□□ -1.06
NEK3-207ENST00000617054 OLFML2BQ68BL8 750 aa8.43□□□□□ -1.06
NEK3-207ENST00000617054 ALKBH5Q6P6C2 394 aaKnown RBP8.43□□□□□ -1.06
NEK3-207ENST00000617054 OR5B17Q8NGF7 314 aa8.43□□□□□ -1.06
NEK3-207ENST00000617054 LNX1Q8TBB1 728 aaPredicted RBP8.43□□□□□ -1.06
NEK3-207ENST00000617054 MFSD14AQ96MC6 490 aa8.43□□□□□ -1.06
NEK3-207ENST00000617054 FNBP1Q96RU3 617 aa8.43□□□□□ -1.06
NEK3-207ENST00000617054 FDXACB1Q9BRP7 624 aaPredicted RBP8.43□□□□□ -1.06
NEK3-207ENST00000617054 STK33Q9BYT3 514 aa8.43□□□□□ -1.06
NEK3-207ENST00000617054 RBAKQ9NYW8 714 aaPredicted RBP8.43□□□□□ -1.06
NEK3-207ENST00000617054 NAGPAQ9UK23 515 aa8.43□□□□□ -1.06
NEK3-207ENST00000617054 HYOU1Q9Y4L1 999 aa8.43□□□□□ -1.06
NEK3-207ENST00000617054 SGPL1O95470 568 aa8.43□□□□□ -1.06
NEK3-207ENST00000617054 TBC1D8O95759 1140 aa8.43□□□□□ -1.06
NEK3-207ENST00000617054 MAPK4P31152 587 aa8.43□□□□□ -1.06
NEK3-207ENST00000617054 ZNF200P98182 395 aaPredicted RBP8.43□□□□□ -1.06
NEK3-207ENST00000617054 CAP1Q01518 475 aa8.43□□□□□ -1.06
NEK3-207ENST00000617054 IER5Q5VY09 327 aa8.43□□□□□ -1.06
NEK3-207ENST00000617054 EEF1DP3Q658K8 133 aa8.43□□□□□ -1.06
NEK3-207ENST00000617054 KRT39Q6A163 491 aa8.43□□□□□ -1.06
NEK3-207ENST00000617054 SLC47A2Q86VL8 602 aa8.43□□□□□ -1.06
NEK3-207ENST00000617054 SLC17A8Q8NDX2 589 aa8.43□□□□□ -1.06
NEK3-207ENST00000617054 PPTC7Q8NI37 304 aa8.43□□□□□ -1.06
NEK3-207ENST00000617054 SYN2Q92777 582 aaPredicted RBP8.43□□□□□ -1.06
NEK3-207ENST00000617054 FBXL18Q96ME1 805 aa8.43□□□□□ -1.06
NEK3-207ENST00000617054 FAM49AQ9H0Q0 323 aaPredicted RBP8.43□□□□□ -1.06
NEK3-207ENST00000617054 VTA1Q9NP79 307 aa8.43□□□□□ -1.06
NEK3-207ENST00000617054 RAB20Q9NX57 234 aa8.43□□□□□ -1.06
NEK3-207ENST00000617054 EXTL3O43909 919 aa8.42□□□□□ -1.06
NEK3-207ENST00000617054 HBP1O60381 514 aa8.42□□□□□ -1.06
NEK3-207ENST00000617054 LCA5LO95447 670 aa8.42□□□□□ -1.06
NEK3-207ENST00000617054 C22orf31O95567 290 aa8.42□□□□□ -1.06
NEK3-207ENST00000617054 CST3P01034 146 aaPredicted RBP8.42□□□□□ -1.06
NEK3-207ENST00000617054 PRKCBP05771 671 aa8.42□□□□□ -1.06
NEK3-207ENST00000617054 CETN1Q12798 172 aa8.42□□□□□ -1.06
NEK3-207ENST00000617054 MYBPC2Q14324 1141 aa8.42□□□□□ -1.06
NEK3-207ENST00000617054 TDRD10Q5VZ19 366 aaKnown RBP8.42□□□□□ -1.06
NEK3-207ENST00000617054 PHLDB2Q86SQ0 1253 aa8.42□□□□□ -1.06
NEK3-207ENST00000617054 GTF3C2Q8WUA4 911 aaPredicted RBP8.42□□□□□ -1.06
NEK3-207ENST00000617054 FAM167AQ96KS9 214 aa8.42□□□□□ -1.06
NEK3-207ENST00000617054 NUCKS1Q9H1E3 243 aaKnown RBP8.42□□□□□ -1.06
NEK3-207ENST00000617054 ABHD16BQ9H3Z7 469 aa8.42□□□□□ -1.06
NEK3-207ENST00000617054 IFT122Q9HBG6 1241 aa8.42□□□□□ -1.06
NEK3-207ENST00000617054 MYO6Q9UM54 1294 aa8.42□□□□□ -1.06
NEK3-207ENST00000617054 A0A0B4J269 797 aa8.42□□□□□ -1.06
NEK3-207ENST00000617054 IGKV6-21A0A0C4DH24 114 aa8.42□□□□□ -1.06
NEK3-207ENST00000617054 FAM155AB1AL88 458 aaPredicted RBP8.42□□□□□ -1.06
NEK3-207ENST00000617054 AOC2O75106 756 aa8.42□□□□□ -1.06
NEK3-207ENST00000617054 PALMO75781 387 aa8.42□□□□□ -1.06
NEK3-207ENST00000617054 MMP3P08254 477 aa8.42□□□□□ -1.06
NEK3-207ENST00000617054 GARTP22102 1010 aa8.42□□□□□ -1.06
NEK3-207ENST00000617054 NOP2P46087 812 aaKnown RBP8.42□□□□□ -1.06
NEK3-207ENST00000617054 PRPF4BQ13523 1007 aaKnown RBP8.42□□□□□ -1.06
NEK3-207ENST00000617054 HIC1Q14526 733 aa8.42□□□□□ -1.06
NEK3-207ENST00000617054 MAPK6Q16659 721 aa8.42□□□□□ -1.06
NEK3-207ENST00000617054 KIZQ2M2Z5 673 aa8.42□□□□□ -1.06
NEK3-207ENST00000617054 DUSP28Q4G0W2 176 aa8.42□□□□□ -1.06
NEK3-207ENST00000617054 C2CD6Q53TS8 623 aa8.42□□□□□ -1.06
NEK3-207ENST00000617054 NFRKBQ6P4R8 1299 aa8.42□□□□□ -1.06
NEK3-207ENST00000617054 FBXL13Q8NEE6 735 aa8.42□□□□□ -1.06
NEK3-207ENST00000617054 ERO1AQ96HE7 468 aa8.42□□□□□ -1.06
NEK3-207ENST00000617054 SCLT1Q96NL6 688 aa8.42□□□□□ -1.06
NEK3-207ENST00000617054 CDHR5Q9HBB8 845 aa8.42□□□□□ -1.06
NEK3-207ENST00000617054 CGNQ9P2M7 1197 aaKnown RBP8.42□□□□□ -1.06
NEK3-207ENST00000617054 UMODL1Q5DID0 1318 aa8.42□□□□□ -1.06
NEK3-207ENST00000617054 PPFIA4O75335 1185 aa8.42□□□□□ -1.06
NEK3-207ENST00000617054 MAP2K5Q13163 448 aa8.42□□□□□ -1.06
NEK3-207ENST00000617054 MORN1Q5T089 497 aa8.42□□□□□ -1.06
NEK3-207ENST00000617054 MARCH8Q5T0T0 291 aa8.42□□□□□ -1.06
NEK3-207ENST00000617054 C17orf99Q6UX52 265 aa8.42□□□□□ -1.06
NEK3-207ENST00000617054 ABRAQ8N0Z2 381 aa8.42□□□□□ -1.06
NEK3-207ENST00000617054 OLIG1Q8TAK6 271 aa8.42□□□□□ -1.06
NEK3-207ENST00000617054 COG1Q8WTW3 980 aa8.42□□□□□ -1.06
NEK3-207ENST00000617054 ACO2Q99798 780 aaKnown RBP8.42□□□□□ -1.06
NEK3-207ENST00000617054 PLEKHA4Q9H4M7 779 aa8.42□□□□□ -1.06
NEK3-207ENST00000617054 TMEM8AQ9HCN3 771 aa8.42□□□□□ -1.06
NEK3-207ENST00000617054 OSGEPQ9NPF4 335 aa8.42□□□□□ -1.06
NEK3-207ENST00000617054 CDC23Q9UJX2 597 aa8.42□□□□□ -1.06
NEK3-207ENST00000617054 TNPO2O14787 897 aaKnown RBP8.41□□□□□ -1.06
NEK3-207ENST00000617054 VNN1O95497 513 aa8.41□□□□□ -1.06
NEK3-207ENST00000617054 TUBB4AP04350 444 aa8.41□□□□□ -1.06
NEK3-207ENST00000617054 KRT5P13647 590 aa8.41□□□□□ -1.06
NEK3-207ENST00000617054 MXD4Q14582 209 aaPredicted RBP8.41□□□□□ -1.06
NEK3-207ENST00000617054 SMYD5Q6GMV2 418 aa8.41□□□□□ -1.06
NEK3-207ENST00000617054 HELQQ8TDG4 1101 aa8.41□□□□□ -1.06
NEK3-207ENST00000617054 UBXN4Q92575 508 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms