RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 CLCA2Q9UQC9 943 aa3.56□□□□□ -1.84
HMGB1P24-202ENST00000615653 PRKAB1Q9Y478 270 aa3.56□□□□□ -1.84
HMGB1P24-202ENST00000615653 CDY2AQ9Y6F7 541 aa3.56□□□□□ -1.84
HMGB1P24-202ENST00000615653 GRXCR1A8MXD5 290 aa3.55□□□□□ -1.84
HMGB1P24-202ENST00000615653 NEMP1O14524 444 aa3.55□□□□□ -1.84
HMGB1P24-202ENST00000615653 TRIM24O15164 1050 aa3.55□□□□□ -1.84
HMGB1P24-202ENST00000615653 TYRP1P17643 537 aa3.55□□□□□ -1.84
HMGB1P24-202ENST00000615653 ENPP1P22413 925 aa3.55□□□□□ -1.84
HMGB1P24-202ENST00000615653 GZMKP49863 264 aa3.55□□□□□ -1.84
HMGB1P24-202ENST00000615653 CD69Q07108 199 aa3.55□□□□□ -1.84
HMGB1P24-202ENST00000615653 FSCN1Q16658 493 aaKnown RBP3.55□□□□□ -1.84
HMGB1P24-202ENST00000615653 C19orf54Q5BKX5 351 aa3.55□□□□□ -1.84
HMGB1P24-202ENST00000615653 CT47A1Q5JQC4 288 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P24-202ENST00000615653 CCDC62Q6P9F0 684 aa3.55□□□□□ -1.84
HMGB1P24-202ENST00000615653 GIMAP6Q6P9H5 292 aa3.55□□□□□ -1.84
HMGB1P24-202ENST00000615653 KRT26Q7Z3Y9 468 aa3.55□□□□□ -1.84
HMGB1P24-202ENST00000615653 FAM83AQ86UY5 434 aa3.55□□□□□ -1.84
HMGB1P24-202ENST00000615653 SLC41A1Q8IVJ1 513 aa3.55□□□□□ -1.84
HMGB1P24-202ENST00000615653 ANKRD13AQ8IZ07 590 aa3.55□□□□□ -1.84
HMGB1P24-202ENST00000615653 AFAP1L2Q8N4X5 818 aa3.55□□□□□ -1.84
HMGB1P24-202ENST00000615653 MB21D1Q8N884 522 aa3.55□□□□□ -1.84
HMGB1P24-202ENST00000615653 CLRN3Q8NCR9 226 aa3.55□□□□□ -1.84
HMGB1P24-202ENST00000615653 ATXN2LQ8WWM7 1075 aaKnown RBP3.55□□□□□ -1.84
HMGB1P24-202ENST00000615653 MNTQ99583 582 aa3.55□□□□□ -1.84
HMGB1P24-202ENST00000615653 SPATA5L1Q9BVQ7 753 aa3.55□□□□□ -1.84
HMGB1P24-202ENST00000615653 ANO3Q9BYT9 981 aa3.55□□□□□ -1.84
HMGB1P24-202ENST00000615653 SLC29A3Q9BZD2 475 aa3.55□□□□□ -1.84
HMGB1P24-202ENST00000615653 KCTD10Q9H3F6 313 aa3.55□□□□□ -1.84
HMGB1P24-202ENST00000615653 MS4A5Q9H3V2 200 aa3.55□□□□□ -1.84
HMGB1P24-202ENST00000615653 ING3Q9NXR8 418 aa3.55□□□□□ -1.84
HMGB1P24-202ENST00000615653 LCHNA4D1U4 455 aa3.54□□□□□ -1.84
HMGB1P24-202ENST00000615653 HOXA3O43365 443 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P24-202ENST00000615653 PHF2O75151 1096 aa3.54□□□□□ -1.84
HMGB1P24-202ENST00000615653 GASTP01350 101 aa3.54□□□□□ -1.84
HMGB1P24-202ENST00000615653 VIL1P09327 827 aaKnown RBP3.54□□□□□ -1.84
HMGB1P24-202ENST00000615653 MTHFD2P13995 350 aa3.54□□□□□ -1.84
HMGB1P24-202ENST00000615653 MRPS9P82933 396 aaKnown RBP3.54□□□□□ -1.84
HMGB1P24-202ENST00000615653 STRN3Q13033 797 aa3.54□□□□□ -1.84
HMGB1P24-202ENST00000615653 MRPL49Q13405 166 aaKnown RBP3.54□□□□□ -1.84
HMGB1P24-202ENST00000615653 UGT8Q16880 541 aa3.54□□□□□ -1.84
HMGB1P24-202ENST00000615653 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.54□□□□□ -1.84
HMGB1P24-202ENST00000615653 KLHL22Q53GT1 634 aa3.54□□□□□ -1.84
HMGB1P24-202ENST00000615653 PITRM1Q5JRX3 1037 aa3.54□□□□□ -1.84
HMGB1P24-202ENST00000615653 C1QL3Q5VWW1 255 aa3.54□□□□□ -1.84
HMGB1P24-202ENST00000615653 IQSEC1Q6DN90 963 aa3.54□□□□□ -1.84
HMGB1P24-202ENST00000615653 PDZD4Q76G19 769 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P24-202ENST00000615653 LYSMD2Q8IV50 215 aa3.54□□□□□ -1.84
HMGB1P24-202ENST00000615653 BOLLQ8N9W6 283 aaKnown RBP3.54□□□□□ -1.84
HMGB1P24-202ENST00000615653 OR5M3Q8NGP4 307 aa3.54□□□□□ -1.84
HMGB1P24-202ENST00000615653 ZNF480Q8WV37 535 aa3.54□□□□□ -1.84
HMGB1P24-202ENST00000615653 ADGRE3Q9BY15 652 aa3.54□□□□□ -1.84
HMGB1P24-202ENST00000615653 EPC1Q9H2F5 836 aa3.54□□□□□ -1.84
HMGB1P24-202ENST00000615653 EVLQ9UI08 416 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P24-202ENST00000615653 HDAC5Q9UQL6 1122 aa3.54□□□□□ -1.84
HMGB1P24-202ENST00000615653 POLR2AP24928 1970 aaKnown RBP3.53□□□□□ -1.84
HMGB1P24-202ENST00000615653 CYSRT1A8MQ03 144 aa3.53□□□□□ -1.84
HMGB1P24-202ENST00000615653 PRR5-ARHGAP8B1AHC4 643 aa3.53□□□□□ -1.84
HMGB1P24-202ENST00000615653 B5MCH6 92 aa3.53□□□□□ -1.84
HMGB1P24-202ENST00000615653 PRAMEF4O60810 478 aa3.53□□□□□ -1.84
HMGB1P24-202ENST00000615653 DNAJC6O75061 913 aa3.53□□□□□ -1.84
HMGB1P24-202ENST00000615653 TMEM127O75204 238 aa3.53□□□□□ -1.84
HMGB1P24-202ENST00000615653 RECQL4O94761 1208 aa3.53□□□□□ -1.84
HMGB1P24-202ENST00000615653 CLEC2LP0C7M8 214 aa3.53□□□□□ -1.84
HMGB1P24-202ENST00000615653 CRHR1P34998 444 aa3.53□□□□□ -1.84
HMGB1P24-202ENST00000615653 CASRP41180 1078 aa3.53□□□□□ -1.84
HMGB1P24-202ENST00000615653 MASP1P48740 699 aa3.53□□□□□ -1.84
HMGB1P24-202ENST00000615653 PTH2RP49190 550 aa3.53□□□□□ -1.84
HMGB1P24-202ENST00000615653 ZNF81P51508 661 aa3.53□□□□□ -1.84
HMGB1P24-202ENST00000615653 LGALS4P56470 323 aa3.53□□□□□ -1.84
HMGB1P24-202ENST00000615653 TRIM25Q14258 630 aaKnown RBP3.53□□□□□ -1.84
HMGB1P24-202ENST00000615653 FAM180AQ6UWF9 173 aa3.53□□□□□ -1.84
HMGB1P24-202ENST00000615653 ELOA2Q8IYF1 753 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P24-202ENST00000615653 OR52N2Q8NGI0 321 aa3.53□□□□□ -1.84
HMGB1P24-202ENST00000615653 SNX33Q8WV41 574 aa3.53□□□□□ -1.84
HMGB1P24-202ENST00000615653 ZNF778Q96MU6 729 aa3.53□□□□□ -1.84
HMGB1P24-202ENST00000615653 CDC5LQ99459 802 aaKnown RBP3.53□□□□□ -1.84
HMGB1P24-202ENST00000615653 TOPORSQ9NS56 1045 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P24-202ENST00000615653 RPTORQ8N122 1335 aa3.52□□□□□ -1.85
HMGB1P24-202ENST00000615653 DIRC3C9JPN6 131 aa3.52□□□□□ -1.85
HMGB1P24-202ENST00000615653 RBMXL2O75526 392 aaKnown RBP3.52□□□□□ -1.85
HMGB1P24-202ENST00000615653 STC2O76061 302 aa3.52□□□□□ -1.85
HMGB1P24-202ENST00000615653 CBSLP0DN79 551 aa3.52□□□□□ -1.85
HMGB1P24-202ENST00000615653 MGAT1P26572 445 aa3.52□□□□□ -1.85
HMGB1P24-202ENST00000615653 CBSP35520 551 aa3.52□□□□□ -1.85
HMGB1P24-202ENST00000615653 ZEB1P37275 1124 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P24-202ENST00000615653 ABCG1P45844 678 aa3.52□□□□□ -1.85
HMGB1P24-202ENST00000615653 ID4P47928 161 aa3.52□□□□□ -1.85
HMGB1P24-202ENST00000615653 USP14P54578 494 aa3.52□□□□□ -1.85
HMGB1P24-202ENST00000615653 NHLH1Q02575 133 aa3.52□□□□□ -1.85
HMGB1P24-202ENST00000615653 PDCD1Q15116 288 aa3.52□□□□□ -1.85
HMGB1P24-202ENST00000615653 UBE3CQ15386 1083 aa3.52□□□□□ -1.85
HMGB1P24-202ENST00000615653 VPS72Q15906 364 aa3.52□□□□□ -1.85
HMGB1P24-202ENST00000615653 FAM214AQ32MH5 1076 aa3.52□□□□□ -1.85
HMGB1P24-202ENST00000615653 CT83Q5H943 113 aa3.52□□□□□ -1.85
HMGB1P24-202ENST00000615653 DRICH1Q6PGQ1 229 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P24-202ENST00000615653 GPRIN1Q7Z2K8 1008 aa3.52□□□□□ -1.85
HMGB1P24-202ENST00000615653 SPATS2Q86XZ4 545 aaKnown RBP3.52□□□□□ -1.85
HMGB1P24-202ENST00000615653 MSL3Q8N5Y2 521 aaKnown RBP3.52□□□□□ -1.85
HMGB1P24-202ENST00000615653 SIMC1Q8NDZ2 872 aa3.52□□□□□ -1.85
HMGB1P24-202ENST00000615653 SUPT20HQ8NEM7 779 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms