RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 SPOPO43791 374 aa11.05□□□□□ -0.64
TNFAIP3-208ENST00000615468 PGM3O95394 542 aa11.05□□□□□ -0.64
TNFAIP3-208ENST00000615468 PENKP01210 267 aaPredicted RBP11.05□□□□□ -0.64
TNFAIP3-208ENST00000615468 TNFAIP3P21580 790 aa11.05□□□□□ -0.64
TNFAIP3-208ENST00000615468 LSAMPQ13449 338 aa11.05□□□□□ -0.64
TNFAIP3-208ENST00000615468 GIT2Q14161 759 aa11.05□□□□□ -0.64
TNFAIP3-208ENST00000615468 MFSD5Q6N075 450 aa11.05□□□□□ -0.64
TNFAIP3-208ENST00000615468 TRMT10CQ7L0Y3 403 aaKnown RBP11.05□□□□□ -0.64
TNFAIP3-208ENST00000615468 IRF2BP2Q7Z5L9 587 aa11.05□□□□□ -0.64
TNFAIP3-208ENST00000615468 CRAMP1Q96RY5 1269 aa11.05□□□□□ -0.64
TNFAIP3-208ENST00000615468 NDE1Q9NXR1 346 aa11.05□□□□□ -0.64
TNFAIP3-208ENST00000615468 SERPINA10Q9UK55 444 aa11.05□□□□□ -0.64
TNFAIP3-208ENST00000615468 PCDHA6Q9UN73 950 aa11.05□□□□□ -0.64
TNFAIP3-208ENST00000615468 PCDHA8Q9Y5H6 950 aa11.05□□□□□ -0.64
TNFAIP3-208ENST00000615468 PVALEFA0A1B0GWK0 134 aa11.04□□□□□ -0.64
TNFAIP3-208ENST00000615468 ANKRD62A6NC57 917 aa11.04□□□□□ -0.64
TNFAIP3-208ENST00000615468 TTLL1O95922 423 aa11.04□□□□□ -0.64
TNFAIP3-208ENST00000615468 CYP1A1P04798 512 aaPredicted RBP11.04□□□□□ -0.64
TNFAIP3-208ENST00000615468 T-ENOLP0DO92 83 aa11.04□□□□□ -0.64
TNFAIP3-208ENST00000615468 ADCY8P40145 1251 aa11.04□□□□□ -0.64
TNFAIP3-208ENST00000615468 NONOQ15233 471 aaKnown RBP eCLIP11.04□□□□□ -0.64
TNFAIP3-208ENST00000615468 HP1BP3Q5SSJ5 553 aaPredicted RBP11.04□□□□□ -0.64
TNFAIP3-208ENST00000615468 NAT14Q8WUY8 206 aa11.04□□□□□ -0.64
TNFAIP3-208ENST00000615468 ALG3Q92685 438 aa11.04□□□□□ -0.64
TNFAIP3-208ENST00000615468 RPGRQ92834 1020 aaKnown RBP11.04□□□□□ -0.64
TNFAIP3-208ENST00000615468 MAF1Q9H063 256 aa11.04□□□□□ -0.64
TNFAIP3-208ENST00000615468 ALG13Q9NP73 1137 aaKnown RBP11.04□□□□□ -0.64
TNFAIP3-208ENST00000615468 PNPLA7Q6ZV29 1317 aa11.04□□□□□ -0.64
TNFAIP3-208ENST00000615468 PARP4Q9UKK3 1724 aaKnown RBP11.04□□□□□ -0.64
TNFAIP3-208ENST00000615468 ARHGAP24Q8N264 748 aa11.04□□□□□ -0.64
TNFAIP3-208ENST00000615468 SYT2Q8N9I0 419 aaPredicted RBP11.04□□□□□ -0.64
TNFAIP3-208ENST00000615468 SH3TC2Q8TF17 1288 aa11.04□□□□□ -0.64
TNFAIP3-208ENST00000615468 PWWP2AQ96N64 755 aa11.04□□□□□ -0.64
TNFAIP3-208ENST00000615468 TSPYL2Q9H2G4 693 aaPredicted RBP11.04□□□□□ -0.64
TNFAIP3-208ENST00000615468 CPVLQ9H3G5 476 aa11.04□□□□□ -0.64
TNFAIP3-208ENST00000615468 MINPP1Q9UNW1 487 aa11.04□□□□□ -0.64
TNFAIP3-208ENST00000615468 MYH4Q9Y623 1939 aa11.04□□□□□ -0.64
TNFAIP3-208ENST00000615468 ABCB11O95342 1321 aa11.04□□□□□ -0.64
TNFAIP3-208ENST00000615468 OR6B1O95007 311 aa11.04□□□□□ -0.64
TNFAIP3-208ENST00000615468 XRCC5P13010 732 aaKnown RBP11.04□□□□□ -0.64
TNFAIP3-208ENST00000615468 CDK7P50613 346 aa11.04□□□□□ -0.64
TNFAIP3-208ENST00000615468 ACVR2BQ13705 512 aa11.04□□□□□ -0.64
TNFAIP3-208ENST00000615468 ARHGAP44Q17R89 818 aa11.04□□□□□ -0.64
TNFAIP3-208ENST00000615468 WDR72Q3MJ13 1102 aa11.04□□□□□ -0.64
TNFAIP3-208ENST00000615468 CCDC92Q53HC0 331 aaPredicted RBP11.04□□□□□ -0.64
TNFAIP3-208ENST00000615468 DCAF12L1Q5VU92 463 aa11.04□□□□□ -0.64
TNFAIP3-208ENST00000615468 PROM2Q8N271 834 aa11.04□□□□□ -0.64
TNFAIP3-208ENST00000615468 CERKQ8TCT0 537 aa11.04□□□□□ -0.64
TNFAIP3-208ENST00000615468 C1orf54Q8WWF1 131 aa11.04□□□□□ -0.64
TNFAIP3-208ENST00000615468 RFFLQ8WZ73 363 aa11.04□□□□□ -0.64
TNFAIP3-208ENST00000615468 CATSPER2Q96P56 530 aa11.04□□□□□ -0.64
TNFAIP3-208ENST00000615468 BTBD10Q9BSF8 475 aa11.04□□□□□ -0.64
TNFAIP3-208ENST00000615468 MTA3Q9BTC8 594 aa11.04□□□□□ -0.64
TNFAIP3-208ENST00000615468 ARHGEF38Q9NXL2 777 aa11.04□□□□□ -0.64
TNFAIP3-208ENST00000615468 FBXO3Q9UK99 471 aa11.04□□□□□ -0.64
TNFAIP3-208ENST00000615468 G3V3G9 751 aa11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 PDLIM1O00151 329 aa11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 LAD1O00515 517 aa11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 ASLP04424 464 aa11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 VIL1P09327 827 aaKnown RBP11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 GOLGA8HP0CJ92 632 aa11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 BTKQ06187 659 aa11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 MED21Q13503 144 aa11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 KBTBD12Q3ZCT8 623 aa11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 DCAF8Q5TAQ9 597 aa11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 DAB2IPQ5VWQ8 1189 aa11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 PRUNE1Q86TP1 453 aa11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 SATL1Q86VE3 508 aa11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 KBTBD2Q8IY47 623 aa11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 PRELID2Q8N945 189 aa11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 NR1H4Q96RI1 486 aaPredicted RBP11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 TMEM109Q9BVC6 243 aa11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 RAB34Q9BZG1 259 aa11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 METTL14Q9HCE5 456 aaKnown RBP11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 ATP8A2Q9NTI2 1148 aa11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 STX8Q9UNK0 236 aa11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 FAF1Q9UNN5 650 aaPredicted RBP11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 TDRKHQ9Y2W6 561 aaKnown RBP11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 RAD21O60216 631 aa11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 CDH16O75309 829 aa11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 RPS6KA4O75676 772 aa11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 ZWINTO95229 277 aa11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 COASYQ13057 564 aa11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 CYLC2Q14093 348 aaPredicted RBP11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 GSTA3Q16772 222 aa11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 GRAMD4Q6IC98 578 aa11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 TXNRD3Q86VQ6 643 aa11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 DZIP1Q86YF9 867 aaKnown RBP11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 SLC25A41Q8N5S1 370 aa11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 SPZ1Q9BXG8 430 aa11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 HEY2Q9UBP5 337 aa11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 STARD13Q9Y3M8 1113 aa11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 PCDHB13Q9Y5F0 798 aa11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 ALG6Q9Y672 507 aa11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 EXOC1LA0A1B0GW35 172 aa11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 USP1O94782 785 aa11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 STK10O94804 968 aaKnown RBP11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 EYA4O95677 639 aa11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 CCDC166P0CW27 439 aa11.03□□□□□ -0.64
TNFAIP3-208ENST00000615468 MARCKSL1P49006 195 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms