RNA–Protein interactions for RNA: ENST00000613721.4

TUBD1-216, Transcript of tubulin delta 1, humanhuman

TSL 5 BASIC

Gene TUBD1, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-216ENST00000613721 VSIG10LQ86VR7 867 aa12.86□□□□□ -0.35
TUBD1-216ENST00000613721 FBXL13Q8NEE6 735 aa12.86□□□□□ -0.35
TUBD1-216ENST00000613721 OR2W6PQ8NHA6 318 aa12.86□□□□□ -0.35
TUBD1-216ENST00000613721 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.86□□□□□ -0.35
TUBD1-216ENST00000613721 BSNDQ8WZ55 320 aa12.86□□□□□ -0.35
TUBD1-216ENST00000613721 ATP6V0A1Q93050 837 aa12.86□□□□□ -0.35
TUBD1-216ENST00000613721 CEP170P1Q96L14 293 aa12.86□□□□□ -0.35
TUBD1-216ENST00000613721 NT5C1BQ96P26 610 aa12.86□□□□□ -0.35
TUBD1-216ENST00000613721 RPS6KC1Q96S38 1066 aa12.86□□□□□ -0.35
TUBD1-216ENST00000613721 TRIM31Q9BZY9 425 aa12.86□□□□□ -0.35
TUBD1-216ENST00000613721 GABBR1Q9UBS5 961 aa12.86□□□□□ -0.35
TUBD1-216ENST00000613721 NFS1Q9Y697 457 aa12.86□□□□□ -0.35
TUBD1-216ENST00000613721 SNCAIPQ9Y6H5 919 aa12.86□□□□□ -0.35
TUBD1-216ENST00000613721 FAM187AA6NFU0 413 aa12.85□□□□□ -0.35
TUBD1-216ENST00000613721 EBAG9O00559 213 aa12.85□□□□□ -0.35
TUBD1-216ENST00000613721 TRIM66O15016 1216 aa12.85□□□□□ -0.35
TUBD1-216ENST00000613721 ATMINO43313 823 aaPredicted RBP12.85□□□□□ -0.35
TUBD1-216ENST00000613721 DKC1O60832 514 aaKnown RBP eCLIP12.85□□□□□ -0.35
TUBD1-216ENST00000613721 MMEP08473 750 aa12.85□□□□□ -0.35
TUBD1-216ENST00000613721 FMO1Q01740 532 aa12.85□□□□□ -0.35
TUBD1-216ENST00000613721 MESDQ14696 234 aa12.85□□□□□ -0.35
TUBD1-216ENST00000613721 SEL1L2Q5TEA6 688 aa12.85□□□□□ -0.35
TUBD1-216ENST00000613721 RUFY4Q6ZNE9 571 aa12.85□□□□□ -0.35
TUBD1-216ENST00000613721 REPS2Q8NFH8 660 aa12.85□□□□□ -0.35
TUBD1-216ENST00000613721 HELQQ8TDG4 1101 aa12.85□□□□□ -0.35
TUBD1-216ENST00000613721 TMC2Q8TDI7 906 aa12.85□□□□□ -0.35
TUBD1-216ENST00000613721 MORC4Q8TE76 937 aa12.85□□□□□ -0.35
TUBD1-216ENST00000613721 ATP8B4Q8TF62 1192 aa12.85□□□□□ -0.35
TUBD1-216ENST00000613721 POMGNT1Q8WZA1 660 aa12.85□□□□□ -0.35
TUBD1-216ENST00000613721 KRT35Q92764 455 aa12.85□□□□□ -0.35
TUBD1-216ENST00000613721 FMO2Q99518 471 aa12.85□□□□□ -0.35
TUBD1-216ENST00000613721 NTPCRQ9BSD7 190 aaKnown RBP12.85□□□□□ -0.35
TUBD1-216ENST00000613721 RASSF4Q9H2L5 321 aa12.85□□□□□ -0.35
TUBD1-216ENST00000613721 CENPHQ9H3R5 247 aa12.85□□□□□ -0.35
TUBD1-216ENST00000613721 RABEP2Q9H5N1 569 aa12.85□□□□□ -0.35
TUBD1-216ENST00000613721 ACP6Q9NPH0 428 aa12.85□□□□□ -0.35
TUBD1-216ENST00000613721 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.85□□□□□ -0.35
TUBD1-216ENST00000613721 RASAL2Q9UJF2 1139 aa12.85□□□□□ -0.35
TUBD1-216ENST00000613721 HNRNPDLO14979 420 aaKnown RBP12.84□□□□□ -0.35
TUBD1-216ENST00000613721 ZNF862O60290 1169 aa12.84□□□□□ -0.35
TUBD1-216ENST00000613721 PHF2O75151 1096 aa12.84□□□□□ -0.35
TUBD1-216ENST00000613721 CYP11B1P15538 503 aa12.84□□□□□ -0.35
TUBD1-216ENST00000613721 COMTP21964 271 aa12.84□□□□□ -0.35
TUBD1-216ENST00000613721 MARCKSL1P49006 195 aa12.84□□□□□ -0.35
TUBD1-216ENST00000613721 SOX10P56693 466 aa12.84□□□□□ -0.35
TUBD1-216ENST00000613721 DHX9Q08211 1270 aaKnown RBP12.84□□□□□ -0.35
TUBD1-216ENST00000613721 DUPD1Q68J44 220 aa12.84□□□□□ -0.35
TUBD1-216ENST00000613721 AADACL2Q6P093 401 aa12.84□□□□□ -0.35
TUBD1-216ENST00000613721 SLC39A4Q6P5W5 647 aa12.84□□□□□ -0.35
TUBD1-216ENST00000613721 ARFGAP2Q8N6H7 521 aa12.84□□□□□ -0.35
TUBD1-216ENST00000613721 ZNF564Q8TBZ8 553 aaPredicted RBP12.84□□□□□ -0.35
TUBD1-216ENST00000613721 TAS1R2Q8TE23 839 aa12.84□□□□□ -0.35
TUBD1-216ENST00000613721 ZNF653Q96CK0 615 aa12.84□□□□□ -0.35
TUBD1-216ENST00000613721 MFSD14AQ96MC6 490 aa12.84□□□□□ -0.35
TUBD1-216ENST00000613721 FBXL18Q96ME1 805 aa12.84□□□□□ -0.35
TUBD1-216ENST00000613721 POP1Q99575 1024 aaKnown RBP12.84□□□□□ -0.35
TUBD1-216ENST00000613721 ERP44Q9BS26 406 aa12.84□□□□□ -0.35
TUBD1-216ENST00000613721 WNT8AQ9H1J5 351 aa12.84□□□□□ -0.35
TUBD1-216ENST00000613721 AS3MTQ9HBK9 375 aa12.84□□□□□ -0.35
TUBD1-216ENST00000613721 TOPORSQ9NS56 1045 aaPredicted RBP12.84□□□□□ -0.35
TUBD1-216ENST00000613721 RAB20Q9NX57 234 aa12.84□□□□□ -0.35
TUBD1-216ENST00000613721 CHORDC1Q9UHD1 332 aaPredicted RBP12.84□□□□□ -0.35
TUBD1-216ENST00000613721 GTF3C4Q9UKN8 822 aa12.84□□□□□ -0.35
TUBD1-216ENST00000613721 AFG3L2Q9Y4W6 797 aa12.84□□□□□ -0.35
TUBD1-216ENST00000613721 MYH9P35579 1960 aaKnown RBP12.84□□□□□ -0.35
TUBD1-216ENST00000613721 OTOFQ9HC10 1997 aa12.84□□□□□ -0.35
TUBD1-216ENST00000613721 ADGRA3Q8IWK6 1321 aa12.84□□□□□ -0.35
TUBD1-216ENST00000613721 ZEB2O60315 1214 aa12.84□□□□□ -0.35
TUBD1-216ENST00000613721 ERLIN2O94905 339 aa12.84□□□□□ -0.35
TUBD1-216ENST00000613721 KCNA2P16389 499 aa12.84□□□□□ -0.35
TUBD1-216ENST00000613721 CHRNA3P32297 505 aa12.84□□□□□ -0.35
TUBD1-216ENST00000613721 GTF2H1P32780 548 aa12.84□□□□□ -0.35
TUBD1-216ENST00000613721 LSP1P33241 339 aa12.84□□□□□ -0.35
TUBD1-216ENST00000613721 CDR2Q01850 454 aa12.84□□□□□ -0.35
TUBD1-216ENST00000613721 GUCY1A3Q02108 690 aa12.84□□□□□ -0.35
TUBD1-216ENST00000613721 CYP24A1Q07973 514 aa12.84□□□□□ -0.35
TUBD1-216ENST00000613721 FSTL1Q12841 308 aa12.84□□□□□ -0.35
TUBD1-216ENST00000613721 BIRC3Q13489 604 aa12.84□□□□□ -0.35
TUBD1-216ENST00000613721 JAMLQ86YT9 394 aa12.84□□□□□ -0.35
TUBD1-216ENST00000613721 GPD1LQ8N335 351 aa12.84□□□□□ -0.35
TUBD1-216ENST00000613721 MCPH1Q8NEM0 835 aa12.84□□□□□ -0.35
TUBD1-216ENST00000613721 NUP85Q9BW27 656 aa12.84□□□□□ -0.35
TUBD1-216ENST00000613721 ELP3Q9H9T3 547 aa12.84□□□□□ -0.35
TUBD1-216ENST00000613721 TRPC6Q9Y210 931 aa12.84□□□□□ -0.35
TUBD1-216ENST00000613721 WDR90Q96KV7 1748 aa12.83□□□□□ -0.35
TUBD1-216ENST00000613721 MYO1FO00160 1098 aa12.83□□□□□ -0.36
TUBD1-216ENST00000613721 NDUFAB1O14561 156 aa12.83□□□□□ -0.36
TUBD1-216ENST00000613721 DGAT1O75907 488 aa12.83□□□□□ -0.36
TUBD1-216ENST00000613721 GGPS1O95749 300 aa12.83□□□□□ -0.36
TUBD1-216ENST00000613721 CYP1A2P05177 515 aa12.83□□□□□ -0.36
TUBD1-216ENST00000613721 PSAPP07602 524 aa12.83□□□□□ -0.36
TUBD1-216ENST00000613721 HPDP32754 393 aaPredicted RBP12.83□□□□□ -0.36
TUBD1-216ENST00000613721 CORO7P57737 925 aa12.83□□□□□ -0.36
TUBD1-216ENST00000613721 SPDYCQ5MJ68 293 aa12.83□□□□□ -0.36
TUBD1-216ENST00000613721 NSUN6Q8TEA1 469 aaKnown RBP12.83□□□□□ -0.36
TUBD1-216ENST00000613721 GLG1Q92896 1179 aa12.83□□□□□ -0.36
TUBD1-216ENST00000613721 FAM107BQ9H098 131 aa12.83□□□□□ -0.36
TUBD1-216ENST00000613721 SEPT9Q9UHD8 586 aaPredicted RBP12.83□□□□□ -0.36
TUBD1-216ENST00000613721 ZNF214Q9UL59 606 aaPredicted RBP12.83□□□□□ -0.36
TUBD1-216ENST00000613721 SPOPO43791 374 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms