RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 NEUROG2Q9H2A3 272 aa18.39■□□□□ 0.54
HMGXB3-206ENST00000613459 USP42Q9H9J4 1324 aaKnown RBP18.39■□□□□ 0.54
HMGXB3-206ENST00000613459 ITIH2P19823 946 aa18.39■□□□□ 0.53
HMGXB3-206ENST00000613459 INPP5AQ14642 412 aa18.39■□□□□ 0.53
HMGXB3-206ENST00000613459 QRICH1Q2TAL8 776 aa18.39■□□□□ 0.53
HMGXB3-206ENST00000613459 ZNF394Q53GI3 561 aa18.39■□□□□ 0.53
HMGXB3-206ENST00000613459 PBXIP1Q96AQ6 731 aa18.39■□□□□ 0.53
HMGXB3-206ENST00000613459 DACH2Q96NX9 599 aa18.39■□□□□ 0.53
HMGXB3-206ENST00000613459 ISCA1Q9BUE6 129 aa18.39■□□□□ 0.53
HMGXB3-206ENST00000613459 NSMCE4AQ9NXX6 385 aa18.39■□□□□ 0.53
HMGXB3-206ENST00000613459 GABBR1Q9UBS5 961 aa18.39■□□□□ 0.53
HMGXB3-206ENST00000613459 PITPNM2Q9BZ72 1349 aa18.39■□□□□ 0.53
HMGXB3-206ENST00000613459 MDH1P40925 334 aaKnown RBP18.39■□□□□ 0.53
HMGXB3-206ENST00000613459 AGBL2Q5U5Z8 902 aa18.39■□□□□ 0.53
HMGXB3-206ENST00000613459 C4orf22Q6V702 233 aa18.39■□□□□ 0.53
HMGXB3-206ENST00000613459 CCDC90BQ9GZT6 254 aa18.39■□□□□ 0.53
HMGXB3-206ENST00000613459 AGO2Q9UKV8 859 aaKnown RBP18.39■□□□□ 0.53
HMGXB3-206ENST00000613459 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.39■□□□□ 0.53
HMGXB3-206ENST00000613459 SATB2Q9UPW6 733 aa18.39■□□□□ 0.53
HMGXB3-206ENST00000613459 USP17L15C9J2P7 530 aa18.39■□□□□ 0.53
HMGXB3-206ENST00000613459 USP17L13C9JLJ4 530 aa18.39■□□□□ 0.53
HMGXB3-206ENST00000613459 USP17L11C9JVI0 530 aa18.39■□□□□ 0.53
HMGXB3-206ENST00000613459 USP17L18D6R9N7 530 aa18.39■□□□□ 0.53
HMGXB3-206ENST00000613459 USP17L22D6RA61 530 aa18.39■□□□□ 0.53
HMGXB3-206ENST00000613459 USP17L17D6RBQ6 530 aa18.39■□□□□ 0.53
HMGXB3-206ENST00000613459 USP17L19D6RCP7 530 aa18.39■□□□□ 0.53
HMGXB3-206ENST00000613459 USP17L20D6RJB6 530 aa18.39■□□□□ 0.53
HMGXB3-206ENST00000613459 USP17L24Q0WX57 530 aa18.39■□□□□ 0.53
HMGXB3-206ENST00000613459 HABP4Q5JVS0 413 aaKnown RBP18.39■□□□□ 0.53
HMGXB3-206ENST00000613459 USP17L6PQ6QN14 398 aa18.39■□□□□ 0.53
HMGXB3-206ENST00000613459 RNPC3Q96LT9 517 aaKnown RBP18.39■□□□□ 0.53
HMGXB3-206ENST00000613459 STK33Q9BYT3 514 aa18.39■□□□□ 0.53
HMGXB3-206ENST00000613459 PHF2O75151 1096 aa18.39■□□□□ 0.53
HMGXB3-206ENST00000613459 SCFD1Q8WVM8 642 aa18.39■□□□□ 0.53
HMGXB3-206ENST00000613459 TSPAN17Q96FV3 270 aa18.39■□□□□ 0.53
HMGXB3-206ENST00000613459 EPC1Q9H2F5 836 aa18.39■□□□□ 0.53
HMGXB3-206ENST00000613459 RAVER2Q9HCJ3 691 aaKnown RBP18.39■□□□□ 0.53
HMGXB3-206ENST00000613459 OVOS2A0A0G2JMS6 1433 aa18.38■□□□□ 0.53
HMGXB3-206ENST00000613459 OVOS2A0A0J9YW53 1432 aa18.38■□□□□ 0.53
HMGXB3-206ENST00000613459 OVOS2Q6IE36 1432 aa18.38■□□□□ 0.53
HMGXB3-206ENST00000613459 A0A1B0GTH6 734 aa18.38■□□□□ 0.53
HMGXB3-206ENST00000613459 ASB14A6NK59 587 aa18.38■□□□□ 0.53
HMGXB3-206ENST00000613459 KDM1AO60341 852 aa18.38■□□□□ 0.53
HMGXB3-206ENST00000613459 CDK17Q00537 523 aa18.38■□□□□ 0.53
HMGXB3-206ENST00000613459 KRT17Q04695 432 aa18.38■□□□□ 0.53
HMGXB3-206ENST00000613459 TKFCQ3LXA3 575 aa18.38■□□□□ 0.53
HMGXB3-206ENST00000613459 ADGRF4Q8IZF3 695 aa18.38■□□□□ 0.53
HMGXB3-206ENST00000613459 AGGF1Q8N302 714 aaeCLIP18.38■□□□□ 0.53
HMGXB3-206ENST00000613459 SGSM3Q96HU1 749 aa18.38■□□□□ 0.53
HMGXB3-206ENST00000613459 EPAS1Q99814 870 aa18.38■□□□□ 0.53
HMGXB3-206ENST00000613459 PCDHA10Q9Y5I2 948 aa18.38■□□□□ 0.53
HMGXB3-206ENST00000613459 HNRNPRO43390 633 aaKnown RBP18.38■□□□□ 0.53
HMGXB3-206ENST00000613459 RALAP11233 206 aa18.38■□□□□ 0.53
HMGXB3-206ENST00000613459 RXRBP28702 533 aa18.38■□□□□ 0.53
HMGXB3-206ENST00000613459 C7orf25Q9BPX7 421 aa18.38■□□□□ 0.53
HMGXB3-206ENST00000613459 EMSYQ7Z589 1322 aa18.38■□□□□ 0.53
HMGXB3-206ENST00000613459 FAM102AQ5T9C2 384 aaPredicted RBP18.38■□□□□ 0.53
HMGXB3-206ENST00000613459 SHC4Q6S5L8 630 aa18.38■□□□□ 0.53
HMGXB3-206ENST00000613459 PPHLN1Q8NEY8 458 aaKnown RBP18.38■□□□□ 0.53
HMGXB3-206ENST00000613459 EHD2Q9NZN4 543 aa18.38■□□□□ 0.53
HMGXB3-206ENST00000613459 HADHAP40939 763 aa18.38■□□□□ 0.53
HMGXB3-206ENST00000613459 TRIM28Q13263 835 aaKnown RBP18.38■□□□□ 0.53
HMGXB3-206ENST00000613459 SLC18A3Q16572 532 aa18.38■□□□□ 0.53
HMGXB3-206ENST00000613459 ZC3H12BQ5HYM0 836 aaKnown RBP18.38■□□□□ 0.53
HMGXB3-206ENST00000613459 POTEFA5A3E0 1075 aa18.37■□□□□ 0.53
HMGXB3-206ENST00000613459 DEAF1O75398 565 aaPredicted RBP18.37■□□□□ 0.53
HMGXB3-206ENST00000613459 POTEIP0CG38 1075 aa18.37■□□□□ 0.53
HMGXB3-206ENST00000613459 HSD17B4P51659 736 aa18.37■□□□□ 0.53
HMGXB3-206ENST00000613459 NFX1Q12986 1120 aaKnown RBP18.37■□□□□ 0.53
HMGXB3-206ENST00000613459 MXD4Q14582 209 aaPredicted RBP18.37■□□□□ 0.53
HMGXB3-206ENST00000613459 POTEGQ6S5H5 508 aa18.37■□□□□ 0.53
HMGXB3-206ENST00000613459 POTEEQ6S8J3 1075 aa18.37■□□□□ 0.53
HMGXB3-206ENST00000613459 ZNF473Q8WTR7 871 aaKnown RBP18.37■□□□□ 0.53
HMGXB3-206ENST00000613459 CMTM5Q96DZ9 223 aa18.37■□□□□ 0.53
HMGXB3-206ENST00000613459 MED14O60244 1454 aa18.37■□□□□ 0.53
HMGXB3-206ENST00000613459 ARHGEF40Q8TER5 1519 aa18.37■□□□□ 0.53
HMGXB3-206ENST00000613459 GSG1L2A8MUP6 293 aa18.37■□□□□ 0.53
HMGXB3-206ENST00000613459 ATP1A1P05023 1023 aaKnown RBP18.37■□□□□ 0.53
HMGXB3-206ENST00000613459 CDH2P19022 906 aaPredicted RBP18.37■□□□□ 0.53
HMGXB3-206ENST00000613459 ZNF211Q13398 564 aaPredicted RBP18.37■□□□□ 0.53
HMGXB3-206ENST00000613459 HAUS6Q7Z4H7 955 aa18.37■□□□□ 0.53
HMGXB3-206ENST00000613459 ELOA2Q8IYF1 753 aaPredicted RBP18.37■□□□□ 0.53
HMGXB3-206ENST00000613459 RIBC1Q8N443 379 aaPredicted RBP18.37■□□□□ 0.53
HMGXB3-206ENST00000613459 STX19Q8N4C7 294 aa18.37■□□□□ 0.53
HMGXB3-206ENST00000613459 RAB42Q8N4Z0 105 aa18.37■□□□□ 0.53
HMGXB3-206ENST00000613459 TSSK1BQ9BXA7 367 aa18.37■□□□□ 0.53
HMGXB3-206ENST00000613459 PIM2Q9P1W9 311 aa18.37■□□□□ 0.53
HMGXB3-206ENST00000613459 SRP68Q9UHB9 627 aaKnown RBP18.37■□□□□ 0.53
HMGXB3-206ENST00000613459 FBXO2Q9UK22 296 aaPredicted RBP18.37■□□□□ 0.53
HMGXB3-206ENST00000613459 TTC7AQ9ULT0 858 aaPredicted RBP18.37■□□□□ 0.53
HMGXB3-206ENST00000613459 MAP3K4Q9Y6R4 1608 aa18.37■□□□□ 0.53
HMGXB3-206ENST00000613459 KRT8P05787 483 aa18.37■□□□□ 0.53
HMGXB3-206ENST00000613459 PRDX5P30044 214 aa18.37■□□□□ 0.53
HMGXB3-206ENST00000613459 PGM1P36871 562 aa18.37■□□□□ 0.53
HMGXB3-206ENST00000613459 KCNQ4P56696 695 aa18.37■□□□□ 0.53
HMGXB3-206ENST00000613459 NCAPHQ15003 741 aa18.37■□□□□ 0.53
HMGXB3-206ENST00000613459 LRRC8BQ6P9F7 803 aa18.37■□□□□ 0.53
HMGXB3-206ENST00000613459 GANCQ8TET4 914 aa18.37■□□□□ 0.53
HMGXB3-206ENST00000613459 ZBTB12Q9Y330 459 aaPredicted RBP18.37■□□□□ 0.53
HMGXB3-206ENST00000613459 DNAJC6O75061 913 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms