RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 RSBN1Q5VWQ0 802 aaPredicted RBP9.25□□□□□ -0.93
TTC28-208ENST00000612946 TRAPPC11Q7Z392 1133 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 TRIM74Q86UV6 250 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 TRIM73Q86UV7 250 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 PPM1KQ8N3J5 372 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 RHOBTB2Q9BYZ6 727 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 AP1G2O75843 785 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 ENO1P06733 434 aaKnown RBP9.24□□□□□ -0.93
TTC28-208ENST00000612946 PTPREP23469 700 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 TALDO1P37837 337 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 ATP6V1E2Q96A05 226 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 AGBL1Q96MI9 1066 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 PABPC3Q9H361 631 aaKnown RBP9.24□□□□□ -0.93
TTC28-208ENST00000612946 CACNA2D2Q9NY47 1150 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 VPS54Q9P1Q0 977 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 WHRNQ9P202 907 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 CCDC33Q8N5R6 958 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 RAPGEF5Q92565 580 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 KRT35Q92764 455 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 RNPEPL1Q9HAU8 725 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 PCDHA4Q9UN74 947 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 TMED5Q9Y3A6 229 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 PJA2O43164 708 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 IFNAR1P17181 557 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 ITPRIPL1Q6GPH6 555 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 NEK10Q6ZWH5 1172 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 C19orf18Q8NEA5 215 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 PALD1Q9ULE6 856 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 SLC16A3O15427 465 aaKnown RBP9.24□□□□□ -0.93
TTC28-208ENST00000612946 FESP07332 822 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 PMLP29590 882 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 POLGP54098 1239 aaPredicted RBP9.24□□□□□ -0.93
TTC28-208ENST00000612946 STX12Q86Y82 276 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 NPHS2Q9NP85 383 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 NINQ8N4C6 2090 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 WDR91A4D1P6 747 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 PHF20L1A8MW92 1017 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 ANKRD65E5RJM6 399 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 TK2O00142 265 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 AKAP10O43572 662 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 USP1O94782 785 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 COPB2P35606 906 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 RPL5P46777 297 aaKnown RBP9.24□□□□□ -0.93
TTC28-208ENST00000612946 KCNQ4P56696 695 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 ZNF827Q17R98 1081 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 NAALADL2Q58DX5 795 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 UNC13DQ70J99 1090 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 PM20D2Q8IYS1 436 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 SAMSN1Q9NSI8 373 aaKnown RBP9.24□□□□□ -0.93
TTC28-208ENST00000612946 HERC5Q9UII4 1024 aaKnown RBP9.24□□□□□ -0.93
TTC28-208ENST00000612946 SOX13Q9UN79 622 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 PBRM1Q86U86 1689 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 PRPF39Q86UA1 669 aaKnown RBP9.24□□□□□ -0.93
TTC28-208ENST00000612946 DNAAF3Q8N9W5 541 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 ABHD8Q96I13 439 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.24□□□□□ -0.93
TTC28-208ENST00000612946 IPPQ9Y573 584 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 ARHGEF37A1IGU5 675 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 CAPN12Q6ZSI9 719 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 RNPC3Q96LT9 517 aaKnown RBP9.24□□□□□ -0.93
TTC28-208ENST00000612946 PIGUQ9H490 435 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 ATP8B3O60423 1300 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 TOM1O60784 492 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 SLC9A1P19634 815 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 TGFBR2P37173 567 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 KDSRQ06136 332 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 LRRC36Q1X8D7 754 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 CNDP1Q96KN2 507 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 ACCSQ96QU6 501 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 ST7Q9NRC1 585 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 DDX20Q9UHI6 824 aaKnown RBP9.24□□□□□ -0.93
TTC28-208ENST00000612946 TAGLN3Q9UI15 199 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 ZBTB8OSQ8IWT0 167 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 PARD3BQ8TEW8 1205 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 KCNJ14Q9UNX9 436 aa9.24□□□□□ -0.93
TTC28-208ENST00000612946 YTHDC2Q9H6S0 1430 aaKnown RBP9.23□□□□□ -0.93
TTC28-208ENST00000612946 RTN3O95197 1032 aaPredicted RBP9.23□□□□□ -0.93
TTC28-208ENST00000612946 ATP1A3P13637 1013 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 CYP4A11Q02928 519 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 CYP4A22Q5TCH4 519 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 FAM45BPQ6NSW5 357 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 VPS33BQ9H267 617 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 ZWILCHQ9H900 591 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 AURKCQ9UQB9 309 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 SNX24Q9Y343 169 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 SPHKAPQ2M3C7 1700 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 A0A1W2PP64 1363 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 ZNF263O14978 683 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 IDH3BO43837 385 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 SRP72O76094 671 aaKnown RBP9.23□□□□□ -0.93
TTC28-208ENST00000612946 ARL13BQ3SXY8 428 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 ELMSAN1Q6PJG2 1045 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 PDCD6IPQ8WUM4 868 aaKnown RBP9.23□□□□□ -0.93
TTC28-208ENST00000612946 PRRG3Q9BZD7 231 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 MANSC1Q9H8J5 431 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 SLC39A2Q9NP94 309 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 SEL1LQ9UBV2 794 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 AXIN1O15169 862 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 MTRF1O75570 445 aaKnown RBP9.23□□□□□ -0.93
TTC28-208ENST00000612946 SETD9Q8NE22 299 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms