RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 FAM187AA6NFU0 413 aa14.01□□□□□ -0.17
TCF3-220ENST00000611869 I3L4J1 428 aa14.01□□□□□ -0.17
TCF3-220ENST00000611869 INHBAP08476 426 aa14.01□□□□□ -0.17
TCF3-220ENST00000611869 FKBP1AP62942 108 aaKnown RBP14.01□□□□□ -0.17
TCF3-220ENST00000611869 SARNPP82979 210 aaKnown RBP14.01□□□□□ -0.17
TCF3-220ENST00000611869 ADCY2Q08462 1091 aa14.01□□□□□ -0.17
TCF3-220ENST00000611869 XRRA1Q6P2D8 792 aa14.01□□□□□ -0.17
TCF3-220ENST00000611869 CCNYQ8ND76 341 aa14.01□□□□□ -0.17
TCF3-220ENST00000611869 PXMP2Q9NR77 195 aa14.01□□□□□ -0.17
TCF3-220ENST00000611869 ROBO3Q96MS0 1386 aa14.01□□□□□ -0.17
TCF3-220ENST00000611869 ZSCAN20P17040 1043 aaPredicted RBP14.01□□□□□ -0.17
TCF3-220ENST00000611869 PCNX4Q63HM2 1172 aa14.01□□□□□ -0.17
TCF3-220ENST00000611869 RBBP8NLQ8NC74 664 aaPredicted RBP14.01□□□□□ -0.17
TCF3-220ENST00000611869 ELMO3Q96BJ8 720 aa14.01□□□□□ -0.17
TCF3-220ENST00000611869 VIPAS39Q9H9C1 493 aa14.01□□□□□ -0.17
TCF3-220ENST00000611869 F8VZ95 297 aa14.01□□□□□ -0.17
TCF3-220ENST00000611869 M0QYV0 167 aa14.01□□□□□ -0.17
TCF3-220ENST00000611869 SGPL1O95470 568 aa14.01□□□□□ -0.17
TCF3-220ENST00000611869 GUCY2CP25092 1073 aa14.01□□□□□ -0.17
TCF3-220ENST00000611869 SPATS2Q86XZ4 545 aaKnown RBP14.01□□□□□ -0.17
TCF3-220ENST00000611869 SLC5A5Q92911 643 aa14.01□□□□□ -0.17
TCF3-220ENST00000611869 ATP6V1G3Q96LB4 118 aa14.01□□□□□ -0.17
TCF3-220ENST00000611869 CFAP57Q96MR6 1250 aa14.01□□□□□ -0.17
TCF3-220ENST00000611869 KIAA1683Q9H0B3 1180 aa14.01□□□□□ -0.17
TCF3-220ENST00000611869 TMEM117Q9H0C3 514 aa14.01□□□□□ -0.17
TCF3-220ENST00000611869 SLC38A10Q9HBR0 1119 aa14.01□□□□□ -0.17
TCF3-220ENST00000611869 LRRC4Q9HBW1 653 aa14.01□□□□□ -0.17
TCF3-220ENST00000611869 TOPORSQ9NS56 1045 aaPredicted RBP14.01□□□□□ -0.17
TCF3-220ENST00000611869 KCND1Q9NSA2 647 aa14.01□□□□□ -0.17
TCF3-220ENST00000611869 NOP14P78316 857 aaKnown RBP14.01□□□□□ -0.17
TCF3-220ENST00000611869 GUCY1A3Q02108 690 aa14.01□□□□□ -0.17
TCF3-220ENST00000611869 MUM1L1Q5H9M0 696 aa14.01□□□□□ -0.17
TCF3-220ENST00000611869 KIAA1755Q5JYT7 1200 aa14.01□□□□□ -0.17
TCF3-220ENST00000611869 CCDC125Q86Z20 511 aa14.01□□□□□ -0.17
TCF3-220ENST00000611869 LRRC8CQ8TDW0 803 aa14.01□□□□□ -0.17
TCF3-220ENST00000611869 FAM118BQ9BPY3 351 aa14.01□□□□□ -0.17
TCF3-220ENST00000611869 CNOT10Q9H9A5 744 aaKnown RBP14.01□□□□□ -0.17
TCF3-220ENST00000611869 UVRAGQ9P2Y5 699 aa14.01□□□□□ -0.17
TCF3-220ENST00000611869 USP20Q9Y2K6 914 aa14.01□□□□□ -0.17
TCF3-220ENST00000611869 NID2Q14112 1375 aa14.01□□□□□ -0.17
TCF3-220ENST00000611869 COL1A1P02452 1464 aaPredicted RBP14.01□□□□□ -0.17
TCF3-220ENST00000611869 COL14A1Q05707 1796 aaKnown RBP14□□□□□ -0.17
TCF3-220ENST00000611869 TISP43B9A030 160 aa14□□□□□ -0.17
TCF3-220ENST00000611869 P4HA2O15460 535 aa14□□□□□ -0.17
TCF3-220ENST00000611869 STAMBPO95630 424 aa14□□□□□ -0.17
TCF3-220ENST00000611869 SNHG28P0DPA3 235 aa14□□□□□ -0.17
TCF3-220ENST00000611869 FGFR4P22455 802 aa14□□□□□ -0.17
TCF3-220ENST00000611869 PGM5Q15124 567 aa14□□□□□ -0.17
TCF3-220ENST00000611869 TMEM139Q8IV31 216 aa14□□□□□ -0.17
TCF3-220ENST00000611869 WDR18Q9BV38 432 aa14□□□□□ -0.17
TCF3-220ENST00000611869 LRRIQ3A6PVS8 624 aaPredicted RBP14□□□□□ -0.17
TCF3-220ENST00000611869 TROVE2P10155 538 aaKnown RBP eCLIP14□□□□□ -0.17
TCF3-220ENST00000611869 MUTP22033 750 aa14□□□□□ -0.17
TCF3-220ENST00000611869 IL9RQ01113 521 aa14□□□□□ -0.17
TCF3-220ENST00000611869 TRIM72Q6ZMU5 477 aa14□□□□□ -0.17
TCF3-220ENST00000611869 TAS1R2Q8TE23 839 aa14□□□□□ -0.17
TCF3-220ENST00000611869 MORC4Q8TE76 937 aa14□□□□□ -0.17
TCF3-220ENST00000611869 SLC20A1Q8WUM9 679 aa14□□□□□ -0.17
TCF3-220ENST00000611869 ARHGEF2Q92974 986 aaKnown RBP14□□□□□ -0.17
TCF3-220ENST00000611869 BTBD6Q96KE9 485 aa14□□□□□ -0.17
TCF3-220ENST00000611869 PCDHB2Q9Y5E7 798 aa14□□□□□ -0.17
TCF3-220ENST00000611869 OATP04181 439 aa14□□□□□ -0.17
TCF3-220ENST00000611869 PPP2R5CQ13362 524 aa14□□□□□ -0.17
TCF3-220ENST00000611869 DHX34Q14147 1143 aaKnown RBP14□□□□□ -0.17
TCF3-220ENST00000611869 WDR93Q6P2C0 686 aa14□□□□□ -0.17
TCF3-220ENST00000611869 FASTKD5Q7L8L6 764 aaKnown RBP14□□□□□ -0.17
TCF3-220ENST00000611869 PDIK1LQ8N165 341 aa14□□□□□ -0.17
TCF3-220ENST00000611869 PYROXD1Q8WU10 500 aa14□□□□□ -0.17
TCF3-220ENST00000611869 PIK3R2O00459 728 aa13.99□□□□□ -0.17
TCF3-220ENST00000611869 WEE2P0C1S8 567 aa13.99□□□□□ -0.17
TCF3-220ENST00000611869 TNFAIP2Q03169 654 aa13.99□□□□□ -0.17
TCF3-220ENST00000611869 KRT17Q04695 432 aa13.99□□□□□ -0.17
TCF3-220ENST00000611869 CHST13Q8NET6 341 aa13.99□□□□□ -0.17
TCF3-220ENST00000611869 CCHCR1Q8TD31 782 aa13.99□□□□□ -0.17
TCF3-220ENST00000611869 ZIM3Q96PE6 472 aa13.99□□□□□ -0.17
TCF3-220ENST00000611869 IP6K2Q9UHH9 426 aa13.99□□□□□ -0.17
TCF3-220ENST00000611869 MAGED2Q9UNF1 606 aaPredicted RBP13.99□□□□□ -0.17
TCF3-220ENST00000611869 HEY1Q9Y5J3 304 aa13.99□□□□□ -0.17
TCF3-220ENST00000611869 RCCD1A6NED2 376 aa13.99□□□□□ -0.17
TCF3-220ENST00000611869 SUN1O94901 812 aa13.99□□□□□ -0.17
TCF3-220ENST00000611869 MMEP08473 750 aa13.99□□□□□ -0.17
TCF3-220ENST00000611869 TCF7P36402 384 aaPredicted RBP13.99□□□□□ -0.17
TCF3-220ENST00000611869 PBX1P40424 430 aa13.99□□□□□ -0.17
TCF3-220ENST00000611869 CCDC38Q502W7 563 aa13.99□□□□□ -0.17
TCF3-220ENST00000611869 C4orf19Q8IY42 314 aa13.99□□□□□ -0.17
TCF3-220ENST00000611869 RDM1Q8NG50 284 aa13.99□□□□□ -0.17
TCF3-220ENST00000611869 NACA2Q9H009 215 aa13.99□□□□□ -0.17
TCF3-220ENST00000611869 AIPL1Q9NZN9 384 aa13.99□□□□□ -0.17
TCF3-220ENST00000611869 ZBED1O96006 694 aa13.99□□□□□ -0.17
TCF3-220ENST00000611869 CLTAP09496 248 aa13.99□□□□□ -0.17
TCF3-220ENST00000611869 MYBL1P10243 752 aa13.99□□□□□ -0.17
TCF3-220ENST00000611869 CA4P22748 312 aa13.99□□□□□ -0.17
TCF3-220ENST00000611869 MSH2P43246 934 aa13.99□□□□□ -0.17
TCF3-220ENST00000611869 DGKZQ13574 1117 aa13.99□□□□□ -0.17
TCF3-220ENST00000611869 CENPUQ71F23 418 aa13.99□□□□□ -0.17
TCF3-220ENST00000611869 CALR3Q96L12 384 aaKnown RBP13.99□□□□□ -0.17
TCF3-220ENST00000611869 RILPQ96NA2 401 aa13.99□□□□□ -0.17
TCF3-220ENST00000611869 PURBQ96QR8 312 aaKnown RBP13.99□□□□□ -0.17
TCF3-220ENST00000611869 MED15Q96RN5 788 aa13.99□□□□□ -0.17
TCF3-220ENST00000611869 GINM1Q9NU53 330 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms