RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 POMGNT1Q8WZA1 660 aa18.5■□□□□ 0.55
NEK3-206ENST00000611833 KIFAP3Q92845 792 aa18.5■□□□□ 0.55
NEK3-206ENST00000611833 TAOK3Q9H2K8 898 aa18.5■□□□□ 0.55
NEK3-206ENST00000611833 PIM2Q9P1W9 311 aa18.5■□□□□ 0.55
NEK3-206ENST00000611833 SLC12A6Q9UHW9 1150 aa18.5■□□□□ 0.55
NEK3-206ENST00000611833 MTUS1Q9ULD2 1270 aa18.5■□□□□ 0.55
NEK3-206ENST00000611833 PCDHA10Q9Y5I2 948 aa18.5■□□□□ 0.55
NEK3-206ENST00000611833 NR3C2P08235 984 aa18.5■□□□□ 0.55
NEK3-206ENST00000611833 GPC3P51654 580 aa18.5■□□□□ 0.55
NEK3-206ENST00000611833 CDR2Q01850 454 aa18.5■□□□□ 0.55
NEK3-206ENST00000611833 NBPF12Q5TAG4 269 aaPredicted RBP18.5■□□□□ 0.55
NEK3-206ENST00000611833 USP37Q86T82 979 aa18.5■□□□□ 0.55
NEK3-206ENST00000611833 HOOK3Q86VS8 718 aa18.5■□□□□ 0.55
NEK3-206ENST00000611833 OTUD6BQ8N6M0 293 aa18.5■□□□□ 0.55
NEK3-206ENST00000611833 FBXO25Q8TCJ0 367 aa18.5■□□□□ 0.55
NEK3-206ENST00000611833 HELQQ8TDG4 1101 aa18.5■□□□□ 0.55
NEK3-206ENST00000611833 TAS1R2Q8TE23 839 aa18.5■□□□□ 0.55
NEK3-206ENST00000611833 CEP170P1Q96L14 293 aa18.5■□□□□ 0.55
NEK3-206ENST00000611833 TOPORSQ9NS56 1045 aaPredicted RBP18.5■□□□□ 0.55
NEK3-206ENST00000611833 RAB20Q9NX57 234 aa18.5■□□□□ 0.55
NEK3-206ENST00000611833 PCYOX1Q9UHG3 505 aa18.5■□□□□ 0.55
NEK3-206ENST00000611833 TELO2Q9Y4R8 837 aa18.5■□□□□ 0.55
NEK3-206ENST00000611833 COL11A1P12107 1806 aaPredicted RBP18.49■□□□□ 0.55
NEK3-206ENST00000611833 GMNCA6NCL1 334 aa18.49■□□□□ 0.55
NEK3-206ENST00000611833 CYP1A2P05177 515 aa18.49■□□□□ 0.55
NEK3-206ENST00000611833 PABPC3Q9H361 631 aaKnown RBP18.49■□□□□ 0.55
NEK3-206ENST00000611833 GABBR1Q9UBS5 961 aa18.49■□□□□ 0.55
NEK3-206ENST00000611833 PARP2Q9UGN5 583 aa18.49■□□□□ 0.55
NEK3-206ENST00000611833 GTF3C4Q9UKN8 822 aa18.49■□□□□ 0.55
NEK3-206ENST00000611833 PNMA2Q9UL42 364 aa18.49■□□□□ 0.55
NEK3-206ENST00000611833 COQ4Q9Y3A0 265 aa18.49■□□□□ 0.55
NEK3-206ENST00000611833 DCDC2CA8MYV0 355 aa18.49■□□□□ 0.55
NEK3-206ENST00000611833 DLATP10515 647 aaKnown RBP18.49■□□□□ 0.55
NEK3-206ENST00000611833 CCND2P30279 289 aa18.49■□□□□ 0.55
NEK3-206ENST00000611833 GBP1P32455 592 aa18.49■□□□□ 0.55
NEK3-206ENST00000611833 DENND2CQ68D51 928 aa18.49■□□□□ 0.55
NEK3-206ENST00000611833 TTC27Q6P3X3 843 aa18.49■□□□□ 0.55
NEK3-206ENST00000611833 ZDHHC24Q6UX98 284 aa18.49■□□□□ 0.55
NEK3-206ENST00000611833 CCDC105Q8IYK2 499 aa18.49■□□□□ 0.55
NEK3-206ENST00000611833 RDM1Q8NG50 284 aa18.49■□□□□ 0.55
NEK3-206ENST00000611833 TMC2Q8TDI7 906 aa18.49■□□□□ 0.55
NEK3-206ENST00000611833 CD101Q93033 1021 aa18.49■□□□□ 0.55
NEK3-206ENST00000611833 ELMO3Q96BJ8 720 aa18.49■□□□□ 0.55
NEK3-206ENST00000611833 GPRASP2Q96D09 838 aa18.49■□□□□ 0.55
NEK3-206ENST00000611833 SENP7Q9BQF6 1050 aa18.49■□□□□ 0.55
NEK3-206ENST00000611833 NTPCRQ9BSD7 190 aaKnown RBP18.49■□□□□ 0.55
NEK3-206ENST00000611833 CNOT8Q9UFF9 292 aaKnown RBP18.49■□□□□ 0.55
NEK3-206ENST00000611833 HACL1Q9UJ83 578 aa18.49■□□□□ 0.55
NEK3-206ENST00000611833 ADGRA3Q8IWK6 1321 aa18.49■□□□□ 0.55
NEK3-206ENST00000611833 KIAA1217Q5T5P2 1943 aa18.48■□□□□ 0.55
NEK3-206ENST00000611833 MEFVO15553 781 aaPredicted RBP18.48■□□□□ 0.55
NEK3-206ENST00000611833 RGS20O76081 388 aa18.48■□□□□ 0.55
NEK3-206ENST00000611833 STBD1O95210 358 aa18.48■□□□□ 0.55
NEK3-206ENST00000611833 CPP00450 1065 aa18.48■□□□□ 0.55
NEK3-206ENST00000611833 FDX1P10109 184 aa18.48■□□□□ 0.55
NEK3-206ENST00000611833 KRT5P13647 590 aa18.48■□□□□ 0.55
NEK3-206ENST00000611833 CDR1P51861 262 aa18.48■□□□□ 0.55
NEK3-206ENST00000611833 BACE1P56817 501 aa18.48■□□□□ 0.55
NEK3-206ENST00000611833 ZDHHC14Q8IZN3 488 aa18.48■□□□□ 0.55
NEK3-206ENST00000611833 REPS2Q8NFH8 660 aa18.48■□□□□ 0.55
NEK3-206ENST00000611833 FBXL18Q96ME1 805 aa18.48■□□□□ 0.55
NEK3-206ENST00000611833 LRRC4CQ9HCJ2 640 aa18.48■□□□□ 0.55
NEK3-206ENST00000611833 UVRAGQ9P2Y5 699 aa18.48■□□□□ 0.55
NEK3-206ENST00000611833 MTRF1LQ9UGC7 380 aaKnown RBP18.48■□□□□ 0.55
NEK3-206ENST00000611833 PCDHA3Q9Y5H8 950 aa18.48■□□□□ 0.55
NEK3-206ENST00000611833 ATXN2Q99700 1313 aaKnown RBP18.48■□□□□ 0.55
NEK3-206ENST00000611833 DOCK1Q14185 1865 aa18.48■□□□□ 0.55
NEK3-206ENST00000611833 KCNA2P16389 499 aa18.48■□□□□ 0.55
NEK3-206ENST00000611833 RPL21P46778 160 aaKnown RBP18.48■□□□□ 0.55
NEK3-206ENST00000611833 RWDD2BP57060 319 aa18.48■□□□□ 0.55
NEK3-206ENST00000611833 SNRNP48Q6IEG0 339 aaKnown RBP18.48■□□□□ 0.55
NEK3-206ENST00000611833 XRRA1Q6P2D8 792 aa18.48■□□□□ 0.55
NEK3-206ENST00000611833 AEBP2Q6ZN18 517 aaPredicted RBP18.48■□□□□ 0.55
NEK3-206ENST00000611833 CPNE8Q86YQ8 564 aa18.48■□□□□ 0.55
NEK3-206ENST00000611833 SLC13A5Q86YT5 568 aaPredicted RBP18.48■□□□□ 0.55
NEK3-206ENST00000611833 MICALL2Q8IY33 904 aa18.48■□□□□ 0.55
NEK3-206ENST00000611833 SPIRE2Q8WWL2 714 aa18.48■□□□□ 0.55
NEK3-206ENST00000611833 DHX38Q92620 1227 aaKnown RBP18.48■□□□□ 0.55
NEK3-206ENST00000611833 ZKSCAN4Q969J2 545 aaPredicted RBP18.48■□□□□ 0.55
NEK3-206ENST00000611833 MFSD14AQ96MC6 490 aa18.48■□□□□ 0.55
NEK3-206ENST00000611833 PAGR1Q9BTK6 254 aa18.48■□□□□ 0.55
NEK3-206ENST00000611833 GRHL1Q9NZI5 618 aa18.48■□□□□ 0.55
NEK3-206ENST00000611833 PTPN22Q9Y2R2 807 aa18.48■□□□□ 0.55
NEK3-206ENST00000611833 ARID2Q68CP9 1835 aa18.47■□□□□ 0.55
NEK3-206ENST00000611833 DOCK5Q9H7D0 1870 aa18.47■□□□□ 0.55
NEK3-206ENST00000611833 RLFQ13129 1914 aa18.47■□□□□ 0.55
NEK3-206ENST00000611833 TCRBV7S2A1N4TA0A589 114 aa18.47■□□□□ 0.55
NEK3-206ENST00000611833 HNRNPDLO14979 420 aaKnown RBP18.47■□□□□ 0.55
NEK3-206ENST00000611833 CAND2O75155 1236 aa18.47■□□□□ 0.55
NEK3-206ENST00000611833 SHBGP04278 402 aa18.47■□□□□ 0.55
NEK3-206ENST00000611833 NUDT17P0C025 328 aa18.47■□□□□ 0.55
NEK3-206ENST00000611833 GTF2H1P32780 548 aa18.47■□□□□ 0.55
NEK3-206ENST00000611833 CYP24A1Q07973 514 aa18.47■□□□□ 0.55
NEK3-206ENST00000611833 ACAD10Q6JQN1 1059 aa18.47■□□□□ 0.55
NEK3-206ENST00000611833 SV2AQ7L0J3 742 aa18.47■□□□□ 0.55
NEK3-206ENST00000611833 TATDN2Q93075 761 aa18.47■□□□□ 0.55
NEK3-206ENST00000611833 BICD1Q96G01 975 aa18.47■□□□□ 0.55
NEK3-206ENST00000611833 C17orf75Q9HAS0 396 aa18.47■□□□□ 0.55
NEK3-206ENST00000611833 ZNFX1Q9P2E3 1918 aaKnown RBP18.47■□□□□ 0.55
NEK3-206ENST00000611833 NFKBIEO00221 500 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms