RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 ZPBP2Q6X784 338 aa28.51■■■□□ 2.15
VEGFA-226ENST00000611736 EP400NLQ6ZTU2 488 aa28.51■■■□□ 2.15
VEGFA-226ENST00000611736 PPP2R3CQ969Q6 453 aa28.51■■■□□ 2.15
VEGFA-226ENST00000611736 COL25A1Q9BXS0 654 aaPredicted RBP28.51■■■□□ 2.15
VEGFA-226ENST00000611736 TNMDQ9H2S6 317 aa28.51■■■□□ 2.15
VEGFA-226ENST00000611736 IGFLR1Q9H665 355 aa28.51■■■□□ 2.15
VEGFA-226ENST00000611736 COG5Q9UP83 839 aa28.51■■■□□ 2.15
VEGFA-226ENST00000611736 NRP1O14786 923 aa28.5■■■□□ 2.15
VEGFA-226ENST00000611736 FSCN2O14926 492 aa28.5■■■□□ 2.15
VEGFA-226ENST00000611736 GAP43P17677 238 aa28.5■■■□□ 2.15
VEGFA-226ENST00000611736 SCP2P22307 547 aa28.5■■■□□ 2.15
VEGFA-226ENST00000611736 GTF2F1P35269 517 aaKnown RBP eCLIP28.5■■■□□ 2.153e-11■■■■■ 42.3
VEGFA-226ENST00000611736 GRM5P41594 1212 aa28.5■■■□□ 2.15
VEGFA-226ENST00000611736 NUCB2P80303 420 aa28.5■■■□□ 2.15
VEGFA-226ENST00000611736 NOLC1Q14978 699 aaKnown RBP eCLIP28.5■■■□□ 2.15
VEGFA-226ENST00000611736 ZC2HC1CQ53FD0 456 aaPredicted RBP28.5■■■□□ 2.15
VEGFA-226ENST00000611736 KCNN1Q92952 543 aa28.5■■■□□ 2.15
VEGFA-226ENST00000611736 CCDC94Q9BW85 323 aaPredicted RBP28.5■■■□□ 2.15
VEGFA-226ENST00000611736 KBTBD4Q9NVX7 518 aa28.5■■■□□ 2.15
VEGFA-226ENST00000611736 TBC1D7Q9P0N9 293 aa28.5■■■□□ 2.15
VEGFA-226ENST00000611736 PTGESO14684 152 aa28.49■■■□□ 2.15
VEGFA-226ENST00000611736 HNRNPDLO14979 420 aaKnown RBP28.49■■■□□ 2.15
VEGFA-226ENST00000611736 LIG4P49917 911 aa28.49■■■□□ 2.15
VEGFA-226ENST00000611736 GTF2BQ00403 316 aa28.49■■■□□ 2.15
VEGFA-226ENST00000611736 TPRNQ4KMQ1 711 aa28.49■■■□□ 2.15
VEGFA-226ENST00000611736 TMC7Q7Z402 723 aa28.49■■■□□ 2.15
VEGFA-226ENST00000611736 RBM23Q86U06 439 aaKnown RBP28.49■■■□□ 2.15
VEGFA-226ENST00000611736 ATXN2LQ8WWM7 1075 aaKnown RBP28.49■■■□□ 2.15
VEGFA-226ENST00000611736 SCAND2PQ9GZW5 306 aaPredicted RBP28.49■■■□□ 2.15
VEGFA-226ENST00000611736 UBE2ZQ9H832 354 aaPredicted RBP28.49■■■□□ 2.15
VEGFA-226ENST00000611736 MRPL44Q9H9J2 332 aaKnown RBP28.49■■■□□ 2.15
VEGFA-226ENST00000611736 SEL1LQ9UBV2 794 aa28.49■■■□□ 2.15
VEGFA-226ENST00000611736 KCNH3Q9ULD8 1083 aa28.49■■■□□ 2.15
VEGFA-226ENST00000611736 CLDN3O15551 220 aa28.48■■■□□ 2.15
VEGFA-226ENST00000611736 NRIP1P48552 1158 aa28.48■■■□□ 2.15
VEGFA-226ENST00000611736 HERC4Q5GLZ8 1057 aaPredicted RBP28.48■■■□□ 2.15
VEGFA-226ENST00000611736 PDE12Q6L8Q7 609 aaKnown RBP28.48■■■□□ 2.15
VEGFA-226ENST00000611736 VPS52Q8N1B4 723 aa28.48■■■□□ 2.15
VEGFA-226ENST00000611736 LRRC27Q9C0I9 530 aa28.48■■■□□ 2.15
VEGFA-226ENST00000611736 PANK4Q9NVE7 773 aa28.48■■■□□ 2.15
VEGFA-226ENST00000611736 CLDND1Q9NY35 253 aa28.48■■■□□ 2.15
VEGFA-226ENST00000611736 CACNG4Q9UBN1 327 aa28.48■■■□□ 2.15
VEGFA-226ENST00000611736 CITO14578 2027 aa28.48■■■□□ 2.15
VEGFA-226ENST00000611736 NR1I2O75469 434 aa28.47■■■□□ 2.15
VEGFA-226ENST00000611736 THP07101 528 aa28.47■■■□□ 2.15
VEGFA-226ENST00000611736 CA8P35219 290 aa28.47■■■□□ 2.15
VEGFA-226ENST00000611736 YARSP54577 528 aaKnown RBP28.47■■■□□ 2.15
VEGFA-226ENST00000611736 MRPS5P82675 430 aaKnown RBP28.47■■■□□ 2.15
VEGFA-226ENST00000611736 AMPD3Q01432 767 aa28.47■■■□□ 2.15
VEGFA-226ENST00000611736 SEZ6Q53EL9 994 aa28.47■■■□□ 2.15
VEGFA-226ENST00000611736 TJAP1Q5JTD0 557 aa28.47■■■□□ 2.15
VEGFA-226ENST00000611736 GLRA4Q5JXX5 417 aa28.47■■■□□ 2.15
VEGFA-226ENST00000611736 ADALQ6DHV7 355 aa28.47■■■□□ 2.15
VEGFA-226ENST00000611736 ZNF720Q7Z2F6 126 aa28.47■■■□□ 2.15
VEGFA-226ENST00000611736 DDX53Q86TM3 631 aaKnown RBP28.47■■■□□ 2.15
VEGFA-226ENST00000611736 RABGGTAQ92696 567 aa28.47■■■□□ 2.15
VEGFA-226ENST00000611736 VN1R3Q9BXE9 311 aa28.47■■■□□ 2.15
VEGFA-226ENST00000611736 TLE6Q9H808 572 aa28.47■■■□□ 2.15
VEGFA-226ENST00000611736 GDPD2Q9HCC8 539 aa28.47■■■□□ 2.15
VEGFA-226ENST00000611736 NGRNQ9NPE2 291 aaKnown RBP28.47■■■□□ 2.15
VEGFA-226ENST00000611736 MARCH5Q9NX47 278 aa28.47■■■□□ 2.15
VEGFA-226ENST00000611736 A0A1B0GVL5 298 aa28.46■■■□□ 2.15
VEGFA-226ENST00000611736 FRMD3A2A2Y4 597 aa28.46■■■□□ 2.15
VEGFA-226ENST00000611736 HIDE1A8MVS5 230 aa28.46■■■□□ 2.15
VEGFA-226ENST00000611736 F8W810 466 aa28.46■■■□□ 2.15
VEGFA-226ENST00000611736 PER2O15055 1255 aa28.46■■■□□ 2.15
VEGFA-226ENST00000611736 PIGRP01833 764 aa28.46■■■□□ 2.15
VEGFA-226ENST00000611736 KCNA5P22460 613 aa28.46■■■□□ 2.15
VEGFA-226ENST00000611736 CMA1P23946 247 aa28.46■■■□□ 2.15
VEGFA-226ENST00000611736 ABCD1P33897 745 aa28.46■■■□□ 2.15
VEGFA-226ENST00000611736 MCL1Q07820 350 aa28.46■■■□□ 2.15
VEGFA-226ENST00000611736 MAP4K3Q8IVH8 894 aa28.46■■■□□ 2.15
VEGFA-226ENST00000611736 CCDC65Q8IXS2 484 aa28.46■■■□□ 2.15
VEGFA-226ENST00000611736 PABPC5Q96DU9 382 aaKnown RBP28.46■■■□□ 2.15
VEGFA-226ENST00000611736 ACAP3Q96P50 834 aa28.46■■■□□ 2.15
VEGFA-226ENST00000611736 TRIM9Q9C026 710 aa28.46■■■□□ 2.15
VEGFA-226ENST00000611736 HAPLN2Q9GZV7 340 aa28.46■■■□□ 2.15
VEGFA-226ENST00000611736 ST6GALNAC4Q9H4F1 302 aa28.46■■■□□ 2.15
VEGFA-226ENST00000611736 MAGEF1Q9HAY2 307 aa28.46■■■□□ 2.15
VEGFA-226ENST00000611736 TOPORSQ9NS56 1045 aaPredicted RBP28.46■■■□□ 2.15
VEGFA-226ENST00000611736 TTC28Q96AY4 2481 aa28.46■■■□□ 2.15
VEGFA-226ENST00000611736 CUL9Q8IWT3 2517 aa28.45■■■□□ 2.15
VEGFA-226ENST00000611736 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP28.45■■■□□ 2.14
VEGFA-226ENST00000611736 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP28.45■■■□□ 2.14
VEGFA-226ENST00000611736 CASTOR2A6NHX0 329 aa28.45■■■□□ 2.14
VEGFA-226ENST00000611736 NCK2O43639 380 aa28.45■■■□□ 2.14
VEGFA-226ENST00000611736 PFKFB1P16118 471 aa28.45■■■□□ 2.14
VEGFA-226ENST00000611736 ASIC1P78348 528 aa28.45■■■□□ 2.14
VEGFA-226ENST00000611736 TUSC3Q13454 348 aa28.45■■■□□ 2.14
VEGFA-226ENST00000611736 SMC1AQ14683 1233 aaKnown RBP28.45■■■□□ 2.14
VEGFA-226ENST00000611736 ASB2Q96Q27 587 aa28.45■■■□□ 2.14
VEGFA-226ENST00000611736 PYM1Q9BRP8 204 aaKnown RBP28.45■■■□□ 2.14
VEGFA-226ENST00000611736 ZBP1Q9H171 429 aa28.45■■■□□ 2.14
VEGFA-226ENST00000611736 LINC01565O15544 149 aa28.44■■■□□ 2.14
VEGFA-226ENST00000611736 GCNT3O95395 438 aa28.44■■■□□ 2.14
VEGFA-226ENST00000611736 COASYQ13057 564 aa28.44■■■□□ 2.14
VEGFA-226ENST00000611736 COL19A1Q14993 1142 aa28.44■■■□□ 2.14
VEGFA-226ENST00000611736 AAK1Q2M2I8 961 aa28.44■■■□□ 2.14
VEGFA-226ENST00000611736 SLC39A4Q6P5W5 647 aa28.44■■■□□ 2.14
VEGFA-226ENST00000611736 AUTS2Q8WXX7 1259 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms