RNA–Protein interactions for RNA: ENST00000611405.4

SRRT-213, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SRRT, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-213ENST00000611405 PLEKHA4Q9H4M7 779 aa12.83□□□□□ -0.36
SRRT-213ENST00000611405 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.83□□□□□ -0.363e-7■■■■■ 139.6
SRRT-213ENST00000611405 FAM153AQ9UHL3 310 aa12.83□□□□□ -0.36
SRRT-213ENST00000611405 CYP1A2P05177 515 aa12.82□□□□□ -0.36
SRRT-213ENST00000611405 MMEP08473 750 aa12.82□□□□□ -0.36
SRRT-213ENST00000611405 EDNRBP24530 442 aa12.82□□□□□ -0.36
SRRT-213ENST00000611405 RFC5P40937 340 aa12.82□□□□□ -0.36
SRRT-213ENST00000611405 CFAP58Q5T655 872 aa12.82□□□□□ -0.36
SRRT-213ENST00000611405 C15orf39Q6ZRI6 1047 aa12.82□□□□□ -0.36
SRRT-213ENST00000611405 FAM76AQ8TAV0 307 aa12.82□□□□□ -0.36
SRRT-213ENST00000611405 DEPTORQ8TB45 409 aa12.82□□□□□ -0.36
SRRT-213ENST00000611405 PSPC1Q8WXF1 523 aaKnown RBP12.82□□□□□ -0.36
SRRT-213ENST00000611405 TMEM143Q96AN5 459 aa12.82□□□□□ -0.36
SRRT-213ENST00000611405 RNPC3Q96LT9 517 aaKnown RBP12.82□□□□□ -0.36
SRRT-213ENST00000611405 NRBP2Q9NSY0 501 aa12.82□□□□□ -0.36
SRRT-213ENST00000611405 BTBD7Q9P203 1132 aa12.82□□□□□ -0.36
SRRT-213ENST00000611405 GOLGA6L10A0A0M3HER8 536 aa12.82□□□□□ -0.36
SRRT-213ENST00000611405 GOLGA6CA6NDK9 693 aa12.82□□□□□ -0.36
SRRT-213ENST00000611405 GOLGA6DP0CG33 693 aa12.82□□□□□ -0.36
SRRT-213ENST00000611405 CAPN2P17655 700 aa12.82□□□□□ -0.36
SRRT-213ENST00000611405 FSTL1Q12841 308 aa12.82□□□□□ -0.36
SRRT-213ENST00000611405 DCAF12L1Q5VU92 463 aa12.82□□□□□ -0.36
SRRT-213ENST00000611405 IQCKQ8N0W5 287 aa12.82□□□□□ -0.36
SRRT-213ENST00000611405 ASAP3Q8TDY4 903 aa12.82□□□□□ -0.36
SRRT-213ENST00000611405 SLC7A3Q8WY07 619 aa12.82□□□□□ -0.36
SRRT-213ENST00000611405 WDR90Q96KV7 1748 aa12.82□□□□□ -0.36
SRRT-213ENST00000611405 GOLGA6AQ9NYA3 693 aa12.82□□□□□ -0.36
SRRT-213ENST00000611405 CALCOCO1Q9P1Z2 691 aa12.82□□□□□ -0.36
SRRT-213ENST00000611405 AGO2Q9UKV8 859 aaKnown RBP12.82□□□□□ -0.36
SRRT-213ENST00000611405 UBA1P22314 1058 aaKnown RBP12.82□□□□□ -0.36
SRRT-213ENST00000611405 GLRA2P23416 452 aa12.82□□□□□ -0.36
SRRT-213ENST00000611405 ACTN2P35609 894 aa12.82□□□□□ -0.36
SRRT-213ENST00000611405 HSPA9P38646 679 aaKnown RBP12.82□□□□□ -0.36
SRRT-213ENST00000611405 GUCY2FP51841 1108 aa12.82□□□□□ -0.36
SRRT-213ENST00000611405 NEDD9Q14511 834 aa12.82□□□□□ -0.36
SRRT-213ENST00000611405 LEKR1Q6ZMV7 388 aa12.82□□□□□ -0.36
SRRT-213ENST00000611405 TATDN2Q93075 761 aa12.82□□□□□ -0.36
SRRT-213ENST00000611405 FNBP1Q96RU3 617 aa12.82□□□□□ -0.36
SRRT-213ENST00000611405 ADARB2Q9NS39 739 aaKnown RBP12.82□□□□□ -0.36
SRRT-213ENST00000611405 C1orf112Q9NSG2 853 aa12.82□□□□□ -0.36
SRRT-213ENST00000611405 UVRAGQ9P2Y5 699 aa12.82□□□□□ -0.36
SRRT-213ENST00000611405 GTF3C4Q9UKN8 822 aa12.82□□□□□ -0.36
SRRT-213ENST00000611405 LCTP09848 1927 aa12.81□□□□□ -0.36
SRRT-213ENST00000611405 GSTTP1A0A1W2PQM5 241 aa12.81□□□□□ -0.36
SRRT-213ENST00000611405 HSPA6P17066 643 aa12.81□□□□□ -0.36
SRRT-213ENST00000611405 HLTFQ14527 1009 aaKnown RBP eCLIP12.81□□□□□ -0.36
SRRT-213ENST00000611405 TRADDQ15628 312 aa12.81□□□□□ -0.36
SRRT-213ENST00000611405 FAM160B1Q5W0V3 765 aa12.81□□□□□ -0.36
SRRT-213ENST00000611405 ACAD10Q6JQN1 1059 aa12.81□□□□□ -0.36
SRRT-213ENST00000611405 CD302Q8IX05 232 aa12.81□□□□□ -0.36
SRRT-213ENST00000611405 PROCA1Q8NCQ7 364 aaPredicted RBP12.81□□□□□ -0.36
SRRT-213ENST00000611405 ZNF526Q8TF50 670 aaPredicted RBP12.81□□□□□ -0.36
SRRT-213ENST00000611405 DDX1Q92499 740 aaKnown RBP12.81□□□□□ -0.36
SRRT-213ENST00000611405 DCPSQ96C86 337 aaKnown RBP12.81□□□□□ -0.36
SRRT-213ENST00000611405 ZIM3Q96PE6 472 aa12.81□□□□□ -0.36
SRRT-213ENST00000611405 CEP89Q96ST8 783 aa12.81□□□□□ -0.36
SRRT-213ENST00000611405 SPATC1LQ9H0A9 340 aa12.81□□□□□ -0.36
SRRT-213ENST00000611405 WNT8AQ9H1J5 351 aa12.81□□□□□ -0.36
SRRT-213ENST00000611405 AMACRQ9UHK6 382 aa12.81□□□□□ -0.36
SRRT-213ENST00000611405 SOWAHBA6NEL2 793 aa12.81□□□□□ -0.36
SRRT-213ENST00000611405 K7ERI5 159 aa12.81□□□□□ -0.36
SRRT-213ENST00000611405 FARP2O94887 1054 aaPredicted RBP12.81□□□□□ -0.36
SRRT-213ENST00000611405 LDHAP00338 332 aaKnown RBP12.81□□□□□ -0.36
SRRT-213ENST00000611405 TGFB3P10600 412 aa12.81□□□□□ -0.36
SRRT-213ENST00000611405 PTENP60484 403 aa12.81□□□□□ -0.36
SRRT-213ENST00000611405 WDR44Q5JSH3 913 aa12.81□□□□□ -0.36
SRRT-213ENST00000611405 GADL1Q6ZQY3 521 aa12.81□□□□□ -0.36
SRRT-213ENST00000611405 SEC14L1Q92503 715 aa12.81□□□□□ -0.36
SRRT-213ENST00000611405 ZNF516Q92618 1163 aa12.81□□□□□ -0.36
SRRT-213ENST00000611405 ZSWIM1Q9BR11 485 aa12.81□□□□□ -0.36
SRRT-213ENST00000611405 TMEM134Q9H6X4 195 aa12.81□□□□□ -0.36
SRRT-213ENST00000611405 FAM114A2Q9NRY5 505 aa12.81□□□□□ -0.36
SRRT-213ENST00000611405 PPME1Q9Y570 386 aa12.81□□□□□ -0.36
SRRT-213ENST00000611405 LRRIQ4A6NIV6 560 aa12.8□□□□□ -0.36
SRRT-213ENST00000611405 RPS6KA5O75582 802 aa12.8□□□□□ -0.36
SRRT-213ENST00000611405 KRT5P13647 590 aa12.8□□□□□ -0.36
SRRT-213ENST00000611405 POU5F1Q01860 360 aaKnown RBP12.8□□□□□ -0.36
SRRT-213ENST00000611405 MESDQ14696 234 aa12.8□□□□□ -0.36
SRRT-213ENST00000611405 TARBP2Q15633 366 aaKnown RBP12.8□□□□□ -0.36
SRRT-213ENST00000611405 ZACNQ401N2 412 aa12.8□□□□□ -0.36
SRRT-213ENST00000611405 NCAPG2Q86XI2 1143 aa12.8□□□□□ -0.36
SRRT-213ENST00000611405 SULF1Q8IWU6 871 aa12.8□□□□□ -0.36
SRRT-213ENST00000611405 ZNF564Q8TBZ8 553 aaPredicted RBP12.8□□□□□ -0.36
SRRT-213ENST00000611405 DHX38Q92620 1227 aaKnown RBP12.8□□□□□ -0.36
SRRT-213ENST00000611405 ALG3Q92685 438 aa12.8□□□□□ -0.36
SRRT-213ENST00000611405 LRRC45Q96CN5 670 aa12.8□□□□□ -0.36
SRRT-213ENST00000611405 NUP85Q9BW27 656 aa12.8□□□□□ -0.36
SRRT-213ENST00000611405 ACP6Q9NPH0 428 aa12.8□□□□□ -0.36
SRRT-213ENST00000611405 UTP11Q9Y3A2 253 aaKnown RBP12.8□□□□□ -0.36
SRRT-213ENST00000611405 DOCK5Q9H7D0 1870 aa12.8□□□□□ -0.36
SRRT-213ENST00000611405 TMEM110-MUSTN1A8MSY1 372 aa12.8□□□□□ -0.36
SRRT-213ENST00000611405 GGPS1O95749 300 aa12.8□□□□□ -0.36
SRRT-213ENST00000611405 C4BPAP04003 597 aaKnown RBP12.8□□□□□ -0.36
SRRT-213ENST00000611405 COMTP21964 271 aa12.8□□□□□ -0.36
SRRT-213ENST00000611405 ECHS1P30084 290 aa12.8□□□□□ -0.36
SRRT-213ENST00000611405 IREB2P48200 963 aaKnown RBP12.8□□□□□ -0.36
SRRT-213ENST00000611405 NLRP11P59045 1033 aaKnown RBP12.8□□□□□ -0.36
SRRT-213ENST00000611405 BPIFB4P59827 614 aa12.8□□□□□ -0.36
SRRT-213ENST00000611405 IRX3P78415 501 aaPredicted RBP12.8□□□□□ -0.36
SRRT-213ENST00000611405 CLEC16AQ2KHT3 1053 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms