RNA–Protein interactions for RNA: ENST00000608425.5

CTCFL-217, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-217ENST00000608425 USH1GQ495M9 461 aa12.68□□□□□ -0.38
CTCFL-217ENST00000608425 MYOCDQ8IZQ8 938 aa12.68□□□□□ -0.38
CTCFL-217ENST00000608425 NME8Q8N427 588 aa12.68□□□□□ -0.38
CTCFL-217ENST00000608425 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.68□□□□□ -0.38
CTCFL-217ENST00000608425 FNDC8Q8TC99 324 aa12.68□□□□□ -0.38
CTCFL-217ENST00000608425 U2AF1L4Q8WU68 220 aaKnown RBP12.68□□□□□ -0.38
CTCFL-217ENST00000608425 CCDC127Q96BQ5 260 aa12.68□□□□□ -0.38
CTCFL-217ENST00000608425 CEP295NLQ96MC4 621 aa12.68□□□□□ -0.38
CTCFL-217ENST00000608425 TCHPQ9BT92 498 aa12.68□□□□□ -0.38
CTCFL-217ENST00000608425 PLVAPQ9BX97 442 aa12.68□□□□□ -0.38
CTCFL-217ENST00000608425 UBA5Q9GZZ9 404 aa12.68□□□□□ -0.38
CTCFL-217ENST00000608425 ARPP21Q9UBL0 812 aaPredicted RBP12.68□□□□□ -0.38
CTCFL-217ENST00000608425 SIK3Q9Y2K2 1263 aa12.68□□□□□ -0.38
CTCFL-217ENST00000608425 SLC12A7Q9Y666 1083 aa12.68□□□□□ -0.38
CTCFL-217ENST00000608425 UBR3Q6ZT12 1888 aa12.68□□□□□ -0.38
CTCFL-217ENST00000608425 MAGEB6P1A0A0J9YX57 407 aa12.68□□□□□ -0.38
CTCFL-217ENST00000608425 KANSL1LA0AUZ9 987 aa12.68□□□□□ -0.38
CTCFL-217ENST00000608425 PRKAB2O43741 272 aa12.68□□□□□ -0.38
CTCFL-217ENST00000608425 ADCY3O60266 1144 aa12.68□□□□□ -0.38
CTCFL-217ENST00000608425 LMNAP02545 664 aaKnown RBP12.68□□□□□ -0.38
CTCFL-217ENST00000608425 PCP11498 1178 aaKnown RBP12.68□□□□□ -0.38
CTCFL-217ENST00000608425 TAC1P20366 129 aa12.68□□□□□ -0.38
CTCFL-217ENST00000608425 COG7P83436 770 aa12.68□□□□□ -0.38
CTCFL-217ENST00000608425 RELAQ04206 551 aa12.68□□□□□ -0.38
CTCFL-217ENST00000608425 BTKQ06187 659 aa12.68□□□□□ -0.38
CTCFL-217ENST00000608425 TBL3Q12788 808 aaKnown RBP12.68□□□□□ -0.38
CTCFL-217ENST00000608425 DNAJC3Q13217 504 aa12.68□□□□□ -0.38
CTCFL-217ENST00000608425 KIF22Q14807 665 aa12.68□□□□□ -0.38
CTCFL-217ENST00000608425 IL17AQ16552 155 aa12.68□□□□□ -0.38
CTCFL-217ENST00000608425 KLHDC10Q6PID8 442 aa12.68□□□□□ -0.38
CTCFL-217ENST00000608425 PHLDB2Q86SQ0 1253 aa12.68□□□□□ -0.38
CTCFL-217ENST00000608425 ERGIC2Q96RQ1 377 aa12.68□□□□□ -0.38
CTCFL-217ENST00000608425 HEPHQ9BQS7 1158 aa12.68□□□□□ -0.38
CTCFL-217ENST00000608425 NUP85Q9BW27 656 aa12.68□□□□□ -0.38
CTCFL-217ENST00000608425 ADAMTS1Q9UHI8 967 aa12.68□□□□□ -0.38
CTCFL-217ENST00000608425 A0A1W2PQJ5 194 aa12.68□□□□□ -0.38
CTCFL-217ENST00000608425 FBP2O00757 339 aa12.68□□□□□ -0.38
CTCFL-217ENST00000608425 EXOC3O60645 756 aa12.68□□□□□ -0.38
CTCFL-217ENST00000608425 PRDM1O75626 825 aa12.68□□□□□ -0.38
CTCFL-217ENST00000608425 STX2P32856 288 aa12.68□□□□□ -0.38
CTCFL-217ENST00000608425 PTGDRQ13258 359 aa12.68□□□□□ -0.38
CTCFL-217ENST00000608425 PAOXQ6QHF9 649 aa12.68□□□□□ -0.38
CTCFL-217ENST00000608425 ZDHHC24Q6UX98 284 aa12.68□□□□□ -0.38
CTCFL-217ENST00000608425 ADGRA1Q86SQ6 560 aa12.68□□□□□ -0.38
CTCFL-217ENST00000608425 IFNLR1Q8IU57 520 aaPredicted RBP12.68□□□□□ -0.38
CTCFL-217ENST00000608425 MIGA1Q8NAN2 632 aa12.68□□□□□ -0.38
CTCFL-217ENST00000608425 PPP1R14BQ96C90 147 aa12.68□□□□□ -0.38
CTCFL-217ENST00000608425 FNBP1Q96RU3 617 aa12.68□□□□□ -0.38
CTCFL-217ENST00000608425 NAP1L3Q99457 506 aaPredicted RBP12.68□□□□□ -0.38
CTCFL-217ENST00000608425 ECSITQ9BQ95 431 aa12.68□□□□□ -0.38
CTCFL-217ENST00000608425 BRIP1Q9BX63 1249 aa12.68□□□□□ -0.38
CTCFL-217ENST00000608425 FOXP1Q9H334 677 aaPredicted RBP12.68□□□□□ -0.38
CTCFL-217ENST00000608425 SRP68Q9UHB9 627 aaKnown RBP12.68□□□□□ -0.38
CTCFL-217ENST00000608425 DDX25Q9UHL0 483 aaKnown RBP12.68□□□□□ -0.38
CTCFL-217ENST00000608425 TACC3Q9Y6A5 838 aa12.68□□□□□ -0.38
CTCFL-217ENST00000608425 CDR2Q01850 454 aa12.67□□□□□ -0.38
CTCFL-217ENST00000608425 CCDC25Q86WR0 208 aa12.67□□□□□ -0.38
CTCFL-217ENST00000608425 WDR75Q8IWA0 830 aaKnown RBP12.67□□□□□ -0.38
CTCFL-217ENST00000608425 SMC6Q96SB8 1091 aa12.67□□□□□ -0.38
CTCFL-217ENST00000608425 HNRNPABQ99729 332 aaKnown RBP12.67□□□□□ -0.38
CTCFL-217ENST00000608425 PTTG2Q9NZH5 202 aa12.67□□□□□ -0.38
CTCFL-217ENST00000608425 SELENONQ9NZV5 590 aa12.67□□□□□ -0.38
CTCFL-217ENST00000608425 STX18Q9P2W9 335 aaKnown RBP12.67□□□□□ -0.38
CTCFL-217ENST00000608425 IVNS1ABPQ9Y6Y0 642 aa12.67□□□□□ -0.38
CTCFL-217ENST00000608425 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.67□□□□□ -0.38
CTCFL-217ENST00000608425 UMODL1Q5DID0 1318 aa12.67□□□□□ -0.38
CTCFL-217ENST00000608425 XPOTO43592 962 aaKnown RBP12.67□□□□□ -0.38
CTCFL-217ENST00000608425 IFNAR1P17181 557 aa12.67□□□□□ -0.38
CTCFL-217ENST00000608425 PTPN4P29074 926 aa12.67□□□□□ -0.38
CTCFL-217ENST00000608425 ANKDD1AQ495B1 522 aa12.67□□□□□ -0.38
CTCFL-217ENST00000608425 TNFAIP8L3Q5GJ75 292 aa12.67□□□□□ -0.38
CTCFL-217ENST00000608425 B3GNT6Q6ZMB0 384 aa12.67□□□□□ -0.38
CTCFL-217ENST00000608425 SEC14L1Q92503 715 aa12.67□□□□□ -0.38
CTCFL-217ENST00000608425 WASF1Q92558 559 aa12.67□□□□□ -0.38
CTCFL-217ENST00000608425 TTC1Q99614 292 aa12.67□□□□□ -0.38
CTCFL-217ENST00000608425 ZKSCAN3Q9BRR0 538 aa12.67□□□□□ -0.38
CTCFL-217ENST00000608425 MKNK1Q9BUB5 465 aa12.67□□□□□ -0.38
CTCFL-217ENST00000608425 ERVK-5Q9HDB9 667 aa12.67□□□□□ -0.38
CTCFL-217ENST00000608425 TBK1Q9UHD2 729 aa12.67□□□□□ -0.38
CTCFL-217ENST00000608425 PLSCR1O15162 318 aa12.66□□□□□ -0.38
CTCFL-217ENST00000608425 ONECUT3O60422 494 aaPredicted RBP12.66□□□□□ -0.38
CTCFL-217ENST00000608425 BAG2O95816 211 aa12.66□□□□□ -0.38
CTCFL-217ENST00000608425 ZBTB48P10074 688 aaPredicted RBP12.66□□□□□ -0.38
CTCFL-217ENST00000608425 NAT2P11245 290 aa12.66□□□□□ -0.38
CTCFL-217ENST00000608425 POU5F1Q01860 360 aaKnown RBP12.66□□□□□ -0.38
CTCFL-217ENST00000608425 CDC16Q13042 620 aa12.66□□□□□ -0.38
CTCFL-217ENST00000608425 WTAPQ15007 396 aa12.66□□□□□ -0.38
CTCFL-217ENST00000608425 PPP2R5BQ15173 497 aa12.66□□□□□ -0.38
CTCFL-217ENST00000608425 SCYL3Q8IZE3 742 aa12.66□□□□□ -0.38
CTCFL-217ENST00000608425 ACTRT1Q8TDG2 376 aa12.66□□□□□ -0.38
CTCFL-217ENST00000608425 SH3RF3Q8TEJ3 882 aaPredicted RBP12.66□□□□□ -0.38
CTCFL-217ENST00000608425 GJD4Q96KN9 370 aaPredicted RBP12.66□□□□□ -0.38
CTCFL-217ENST00000608425 TPK1Q9H3S4 243 aa12.66□□□□□ -0.38
CTCFL-217ENST00000608425 LUC7LQ9NQ29 371 aaKnown RBP12.66□□□□□ -0.38
CTCFL-217ENST00000608425 RABL2AQ9UBK7 228 aaPredicted RBP12.66□□□□□ -0.38
CTCFL-217ENST00000608425 STX8Q9UNK0 236 aa12.66□□□□□ -0.38
CTCFL-217ENST00000608425 MYPNQ86TC9 1320 aa12.66□□□□□ -0.38
CTCFL-217ENST00000608425 PP2D1A8MPX8 630 aa12.66□□□□□ -0.38
CTCFL-217ENST00000608425 PSMA7O14818 248 aa12.66□□□□□ -0.38
CTCFL-217ENST00000608425 ADRA2BP18089 450 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms