RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 PSPC1Q8WXF1 523 aaKnown RBP21.29■■□□□ 1
SGMS1-208ENST00000608287 SMG7Q92540 1137 aaKnown RBP21.29■■□□□ 1
SGMS1-208ENST00000608287 MTRQ99707 1265 aa21.29■■□□□ 1
SGMS1-208ENST00000608287 GBP3Q9H0R5 595 aa21.29■■□□□ 1
SGMS1-208ENST00000608287 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.29■■□□□ 1
SGMS1-208ENST00000608287 COL4A3BPQ9Y5P4 624 aa21.29■■□□□ 1
SGMS1-208ENST00000608287 DOCK8Q8NF50 2099 aa21.28■■□□□ 1
SGMS1-208ENST00000608287 K7ELQ4 463 aaPredicted RBP21.28■■□□□ 1
SGMS1-208ENST00000608287 LAD1O00515 517 aa21.28■■□□□ 1
SGMS1-208ENST00000608287 N4BP1O75113 896 aaKnown RBP21.28■■□□□ 1
SGMS1-208ENST00000608287 ZNF623O75123 536 aa21.28■■□□□ 1
SGMS1-208ENST00000608287 SOD2P04179 222 aa21.28■■□□□ 1
SGMS1-208ENST00000608287 SLC11A1P49279 550 aa21.28■■□□□ 1
SGMS1-208ENST00000608287 FXR2P51116 673 aaKnown RBP eCLIP21.28■■□□□ 1
SGMS1-208ENST00000608287 PRPF31Q8WWY3 499 aaKnown RBP21.28■■□□□ 1
SGMS1-208ENST00000608287 POLR3CQ9BUI4 534 aaPredicted RBP21.28■■□□□ 1
SGMS1-208ENST00000608287 OSBPL6Q9BZF3 934 aa21.28■■□□□ 1
SGMS1-208ENST00000608287 PLEKHA4Q9H4M7 779 aa21.28■■□□□ 1
SGMS1-208ENST00000608287 FAM105AQ9NUU6 356 aa21.28■■□□□ 1
SGMS1-208ENST00000608287 SPATA6Q9NWH7 488 aaPredicted RBP21.28■■□□□ 1
SGMS1-208ENST00000608287 LRWD1Q9UFC0 647 aa21.28■■□□□ 1
SGMS1-208ENST00000608287 PIN4Q9Y237 131 aaKnown RBP21.28■■□□□ 1
SGMS1-208ENST00000608287 FAN1Q9Y2M0 1017 aa21.28■■□□□ 1
SGMS1-208ENST00000608287 CNTNAP2Q9UHC6 1331 aa21.28■■□□□ 1
SGMS1-208ENST00000608287 SPTBN2O15020 2390 aa21.28■■□□□ 1
SGMS1-208ENST00000608287 VPS37CA5D8V6 355 aaPredicted RBP21.27■■□□□ 1
SGMS1-208ENST00000608287 LILRB3O75022 631 aa21.27■■□□□ 1
SGMS1-208ENST00000608287 SSBP05455 408 aaKnown RBP eCLIP21.27■■□□□ 1
SGMS1-208ENST00000608287 XRCC6P12956 609 aaKnown RBP eCLIP21.27■■□□□ 18e-7■■■■■ 41.4
SGMS1-208ENST00000608287 LAMP2P13473 410 aa21.27■■□□□ 1
SGMS1-208ENST00000608287 PDCP20941 246 aa21.27■■□□□ 1
SGMS1-208ENST00000608287 RPA1P27694 616 aa21.27■■□□□ 1
SGMS1-208ENST00000608287 RARRES1P49788 294 aa21.27■■□□□ 1
SGMS1-208ENST00000608287 HAUS3Q68CZ6 603 aa21.27■■□□□ 1
SGMS1-208ENST00000608287 POTEGQ6S5H5 508 aa21.27■■□□□ 1
SGMS1-208ENST00000608287 BCL7CQ8WUZ0 217 aaPredicted RBP21.27■■□□□ 1
SGMS1-208ENST00000608287 RPS6KC1Q96S38 1066 aa21.27■■□□□ 1
SGMS1-208ENST00000608287 RAB34Q9BZG1 259 aa21.27■■□□□ 1
SGMS1-208ENST00000608287 FOXD4L1Q9NU39 408 aa21.27■■□□□ 1
SGMS1-208ENST00000608287 ZDHHC7Q9NXF8 308 aa21.27■■□□□ 1
SGMS1-208ENST00000608287 KANSL1LA0AUZ9 987 aa21.26■□□□□ 0.99
SGMS1-208ENST00000608287 ANHXE9PGG2 379 aa21.26■□□□□ 0.99
SGMS1-208ENST00000608287 OFD1O75665 1012 aa21.26■□□□□ 0.99
SGMS1-208ENST00000608287 DGAT1O75907 488 aa21.26■□□□□ 0.99
SGMS1-208ENST00000608287 SRGAP2CP0DJJ0 459 aa21.26■□□□□ 0.99
SGMS1-208ENST00000608287 CCT6AP40227 531 aaKnown RBP21.26■□□□□ 0.99
SGMS1-208ENST00000608287 PRKCQQ04759 706 aa21.26■□□□□ 0.99
SGMS1-208ENST00000608287 LAMTOR4Q0VGL1 99 aa21.26■□□□□ 0.99
SGMS1-208ENST00000608287 PDIA5Q14554 519 aa21.26■□□□□ 0.99
SGMS1-208ENST00000608287 RSPO2Q6UXX9 243 aaPredicted RBP21.26■□□□□ 0.99
SGMS1-208ENST00000608287 DTHD1Q6ZMT9 781 aa21.26■□□□□ 0.99
SGMS1-208ENST00000608287 NACC1Q96RE7 527 aa21.26■□□□□ 0.99
SGMS1-208ENST00000608287 MYADMQ96S97 322 aa21.26■□□□□ 0.99
SGMS1-208ENST00000608287 HERC2P3Q9BVR0 1158 aa21.26■□□□□ 0.99
SGMS1-208ENST00000608287 VN1R3Q9BXE9 311 aa21.26■□□□□ 0.99
SGMS1-208ENST00000608287 XPNPEP1Q9NQW7 623 aa21.26■□□□□ 0.99
SGMS1-208ENST00000608287 DNAJB4Q9UDY4 337 aa21.26■□□□□ 0.99
SGMS1-208ENST00000608287 GMEB2Q9UKD1 530 aa21.26■□□□□ 0.99
SGMS1-208ENST00000608287 ASAP2O43150 1006 aa21.25■□□□□ 0.99
SGMS1-208ENST00000608287 TBC1D4O60343 1298 aa21.25■□□□□ 0.99
SGMS1-208ENST00000608287 USO1O60763 962 aaKnown RBP21.25■□□□□ 0.99
SGMS1-208ENST00000608287 PAPLNO95428 1278 aa21.25■□□□□ 0.99
SGMS1-208ENST00000608287 ADRB1P08588 477 aa21.25■□□□□ 0.99
SGMS1-208ENST00000608287 PRPHP41219 470 aa21.25■□□□□ 0.99
SGMS1-208ENST00000608287 PFKPQ01813 784 aa21.25■□□□□ 0.99
SGMS1-208ENST00000608287 HTR4Q13639 388 aa21.25■□□□□ 0.99
SGMS1-208ENST00000608287 FERMT3Q86UX7 667 aa21.25■□□□□ 0.99
SGMS1-208ENST00000608287 LPPQ93052 612 aa21.25■□□□□ 0.99
SGMS1-208ENST00000608287 INTS4Q96HW7 963 aaKnown RBP21.25■□□□□ 0.99
SGMS1-208ENST00000608287 EPC1Q9H2F5 836 aa21.25■□□□□ 0.99
SGMS1-208ENST00000608287 ZSCAN32Q9NX65 697 aa21.25■□□□□ 0.99
SGMS1-208ENST00000608287 USP18Q9UMW8 372 aa21.25■□□□□ 0.99
SGMS1-208ENST00000608287 SMG5Q9UPR3 1016 aaKnown RBP21.25■□□□□ 0.99
SGMS1-208ENST00000608287 GPR179Q6PRD1 2367 aa21.24■□□□□ 0.99
SGMS1-208ENST00000608287 NCAM2O15394 837 aa21.24■□□□□ 0.99
SGMS1-208ENST00000608287 NR1I2O75469 434 aa21.24■□□□□ 0.99
SGMS1-208ENST00000608287 GLUD2P49448 558 aa21.24■□□□□ 0.99
SGMS1-208ENST00000608287 CREMQ03060 361 aa21.24■□□□□ 0.99
SGMS1-208ENST00000608287 GET4Q7L5D6 327 aaPredicted RBP21.24■□□□□ 0.99
SGMS1-208ENST00000608287 CATSPER4Q7RTX7 472 aa21.24■□□□□ 0.99
SGMS1-208ENST00000608287 BRAPQ7Z569 592 aa21.24■□□□□ 0.99
SGMS1-208ENST00000608287 IGSF22Q8N9C0 903 aa21.24■□□□□ 0.99
SGMS1-208ENST00000608287 RNF149Q8NC42 400 aa21.24■□□□□ 0.99
SGMS1-208ENST00000608287 SNX29Q8TEQ0 813 aa21.24■□□□□ 0.99
SGMS1-208ENST00000608287 FAM126AQ9BYI3 521 aaPredicted RBP21.24■□□□□ 0.99
SGMS1-208ENST00000608287 FOXQ1Q9C009 403 aa21.24■□□□□ 0.99
SGMS1-208ENST00000608287 IFT122Q9HBG6 1241 aa21.24■□□□□ 0.99
SGMS1-208ENST00000608287 UBN1Q9NPG3 1134 aa21.24■□□□□ 0.99
SGMS1-208ENST00000608287 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.24■□□□□ 0.99
SGMS1-208ENST00000608287 STK24Q9Y6E0 443 aa21.24■□□□□ 0.99
SGMS1-208ENST00000608287 NUMBLQ9Y6R0 609 aa21.24■□□□□ 0.99
SGMS1-208ENST00000608287 CACNA1GO43497 2377 aa21.24■□□□□ 0.99
SGMS1-208ENST00000608287 MTCL1Q9Y4B5 1905 aaKnown RBP21.23■□□□□ 0.99
SGMS1-208ENST00000608287 PATJQ8NI35 1801 aa21.23■□□□□ 0.99
SGMS1-208ENST00000608287 C2CD2LO14523 706 aa21.23■□□□□ 0.99
SGMS1-208ENST00000608287 TEX28O15482 410 aa21.23■□□□□ 0.99
SGMS1-208ENST00000608287 MUTP22033 750 aa21.23■□□□□ 0.99
SGMS1-208ENST00000608287 ATP2C1P98194 919 aaPredicted RBP21.23■□□□□ 0.99
SGMS1-208ENST00000608287 MXD4Q14582 209 aaPredicted RBP21.23■□□□□ 0.99
SGMS1-208ENST00000608287 IL17AQ16552 155 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms