RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 ZNF507Q8TCN5 953 aa15.6■□□□□ 0.09
CTSA-211ENST00000606066 CLP1Q92989 425 aaKnown RBP15.6■□□□□ 0.09
CTSA-211ENST00000606066 HPS3Q969F9 1004 aa15.6■□□□□ 0.09
CTSA-211ENST00000606066 RNF39Q9H2S5 420 aa15.6■□□□□ 0.09
CTSA-211ENST00000606066 TOPORSQ9NS56 1045 aaPredicted RBP15.6■□□□□ 0.09
CTSA-211ENST00000606066 RMND1Q9NWS8 449 aa15.6■□□□□ 0.09
CTSA-211ENST00000606066 SNTG2Q9NY99 539 aa15.6■□□□□ 0.09
CTSA-211ENST00000606066 INPP5FQ9Y2H2 1132 aa15.6■□□□□ 0.09
CTSA-211ENST00000606066 UBE4BO95155 1302 aa15.6■□□□□ 0.09
CTSA-211ENST00000606066 ZMYM2Q9UBW7 1377 aa15.6■□□□□ 0.09
CTSA-211ENST00000606066 REV3LO60673 3130 aa15.59■□□□□ 0.09
CTSA-211ENST00000606066 MEIS3P2A8K0S8 358 aa15.59■□□□□ 0.09
CTSA-211ENST00000606066 RFXAPO00287 272 aa15.59■□□□□ 0.09
CTSA-211ENST00000606066 PRPF6O94906 941 aaKnown RBP15.59■□□□□ 0.09
CTSA-211ENST00000606066 KIF20AO95235 890 aa15.59■□□□□ 0.09
CTSA-211ENST00000606066 PRR29P0C7W0 189 aa15.59■□□□□ 0.09
CTSA-211ENST00000606066 HARSP12081 509 aaKnown RBP15.59■□□□□ 0.09
CTSA-211ENST00000606066 PLA2G5P39877 138 aa15.59■□□□□ 0.09
CTSA-211ENST00000606066 ERVK-21P61565 698 aa15.59■□□□□ 0.09
CTSA-211ENST00000606066 RNASELQ05823 741 aaKnown RBP15.59■□□□□ 0.09
CTSA-211ENST00000606066 EPM2AIP1Q7L775 607 aaPredicted RBP15.59■□□□□ 0.09
CTSA-211ENST00000606066 ZBTB45Q96K62 511 aaPredicted RBP15.59■□□□□ 0.09
CTSA-211ENST00000606066 FAM193BQ96PV7 902 aaPredicted RBP15.59■□□□□ 0.09
CTSA-211ENST00000606066 RPS6KC1Q96S38 1066 aa15.59■□□□□ 0.09
CTSA-211ENST00000606066 SLC39A2Q9NP94 309 aa15.59■□□□□ 0.09
CTSA-211ENST00000606066 TYW1Q9NV66 732 aaKnown RBP15.59■□□□□ 0.09
CTSA-211ENST00000606066 LMCD1Q9NZU5 365 aa15.59■□□□□ 0.09
CTSA-211ENST00000606066 MRPL42Q9Y6G3 142 aaKnown RBP15.59■□□□□ 0.09
CTSA-211ENST00000606066 COL4A6Q14031 1691 aa15.59■□□□□ 0.09
CTSA-211ENST00000606066 ARL5CA6NH57 179 aa15.58■□□□□ 0.08
CTSA-211ENST00000606066 ABLIM1O14639 778 aa15.58■□□□□ 0.08
CTSA-211ENST00000606066 INPPL1O15357 1258 aa15.58■□□□□ 0.08
CTSA-211ENST00000606066 RHOBTB3O94955 611 aa15.58■□□□□ 0.08
CTSA-211ENST00000606066 RB1P06400 928 aa15.58■□□□□ 0.08
CTSA-211ENST00000606066 LAG3P18627 525 aa15.58■□□□□ 0.08
CTSA-211ENST00000606066 BMPR1AP36894 532 aa15.58■□□□□ 0.08
CTSA-211ENST00000606066 MLH1P40692 756 aa15.58■□□□□ 0.08
CTSA-211ENST00000606066 SNRPFP62306 86 aaKnown RBP15.58■□□□□ 0.08
CTSA-211ENST00000606066 KCNA1Q09470 495 aa15.58■□□□□ 0.08
CTSA-211ENST00000606066 PNOCQ13519 176 aa15.58■□□□□ 0.08
CTSA-211ENST00000606066 TMEM192Q8IY95 271 aa15.58■□□□□ 0.08
CTSA-211ENST00000606066 THNSL1Q8IYQ7 743 aa15.58■□□□□ 0.08
CTSA-211ENST00000606066 MICALL1Q8N3F8 863 aa15.58■□□□□ 0.08
CTSA-211ENST00000606066 ARNTL2Q8WYA1 636 aa15.58■□□□□ 0.08
CTSA-211ENST00000606066 POMGNT1Q8WZA1 660 aa15.58■□□□□ 0.08
CTSA-211ENST00000606066 SMARCE1Q969G3 411 aa15.58■□□□□ 0.08
CTSA-211ENST00000606066 ACAP3Q96P50 834 aa15.58■□□□□ 0.08
CTSA-211ENST00000606066 NECAB3Q96P71 396 aaPredicted RBP15.58■□□□□ 0.08
CTSA-211ENST00000606066 GSDMAQ96QA5 445 aa15.58■□□□□ 0.08
CTSA-211ENST00000606066 GAD1Q99259 594 aa15.58■□□□□ 0.08
CTSA-211ENST00000606066 MSTO1Q9BUK6 570 aa15.58■□□□□ 0.08
CTSA-211ENST00000606066 PLVAPQ9BX97 442 aa15.58■□□□□ 0.08
CTSA-211ENST00000606066 FGFBP2Q9BYJ0 223 aa15.58■□□□□ 0.08
CTSA-211ENST00000606066 GTPBP4Q9BZE4 634 aaKnown RBP15.58■□□□□ 0.08
CTSA-211ENST00000606066 RAPGEFL1Q9UHV5 662 aa15.58■□□□□ 0.08
CTSA-211ENST00000606066 GDAQ9Y2T3 454 aa15.58■□□□□ 0.08
CTSA-211ENST00000606066 PCDHB12Q9Y5F1 795 aa15.58■□□□□ 0.08
CTSA-211ENST00000606066 STYXL1Q9Y6J8 313 aa15.58■□□□□ 0.08
CTSA-211ENST00000606066 A0A0B4J269 797 aa15.57■□□□□ 0.08
CTSA-211ENST00000606066 EPOPA6NHQ4 379 aa15.57■□□□□ 0.08
CTSA-211ENST00000606066 ANKRD63C9JTQ0 380 aa15.57■□□□□ 0.08
CTSA-211ENST00000606066 OGTO15294 1046 aa15.57■□□□□ 0.08
CTSA-211ENST00000606066 RECQL4O94761 1208 aa15.57■□□□□ 0.08
CTSA-211ENST00000606066 ARHGEF15O94989 841 aa15.57■□□□□ 0.08
CTSA-211ENST00000606066 CLTAP09496 248 aa15.57■□□□□ 0.08
CTSA-211ENST00000606066 GARTP22102 1010 aa15.57■□□□□ 0.08
CTSA-211ENST00000606066 CTNNB1P35222 781 aa15.57■□□□□ 0.08
CTSA-211ENST00000606066 KCNQ1P51787 676 aa15.57■□□□□ 0.08
CTSA-211ENST00000606066 OSTNP61366 133 aa15.57■□□□□ 0.08
CTSA-211ENST00000606066 STK4Q13043 487 aa15.57■□□□□ 0.08
CTSA-211ENST00000606066 SKIV2LQ15477 1246 aaKnown RBP15.57■□□□□ 0.08
CTSA-211ENST00000606066 BMT2Q1RMZ1 405 aa15.57■□□□□ 0.08
CTSA-211ENST00000606066 EPC2Q52LR7 807 aa15.57■□□□□ 0.08
CTSA-211ENST00000606066 HS2ST1Q7LGA3 356 aa15.57■□□□□ 0.08
CTSA-211ENST00000606066 GLIS3Q8NEA6 775 aa15.57■□□□□ 0.08
CTSA-211ENST00000606066 SCFD1Q8WVM8 642 aa15.57■□□□□ 0.08
CTSA-211ENST00000606066 C17orf80Q9BSJ5 609 aa15.57■□□□□ 0.08
CTSA-211ENST00000606066 GBP3Q9H0R5 595 aa15.57■□□□□ 0.08
CTSA-211ENST00000606066 CWH43Q9H720 699 aa15.57■□□□□ 0.08
CTSA-211ENST00000606066 CERS4Q9HA82 394 aa15.57■□□□□ 0.08
CTSA-211ENST00000606066 LMBRD1Q9NUN5 540 aa15.57■□□□□ 0.08
CTSA-211ENST00000606066 TBC1D13Q9NVG8 400 aa15.57■□□□□ 0.08
CTSA-211ENST00000606066 KLK14Q9P0G3 267 aa15.57■□□□□ 0.08
CTSA-211ENST00000606066 MTUS1Q9ULD2 1270 aa15.57■□□□□ 0.08
CTSA-211ENST00000606066 C5orf67F2Z3F1 127 aa15.56■□□□□ 0.08
CTSA-211ENST00000606066 KIAA0391O15091 583 aaKnown RBP15.56■□□□□ 0.08
CTSA-211ENST00000606066 LDHAP00338 332 aaKnown RBP15.56■□□□□ 0.08
CTSA-211ENST00000606066 POMCP01189 267 aa15.56■□□□□ 0.08
CTSA-211ENST00000606066 ALDH7A1P49419 539 aaKnown RBP15.56■□□□□ 0.08
CTSA-211ENST00000606066 SCNN1GP51170 649 aa15.56■□□□□ 0.08
CTSA-211ENST00000606066 GRIK3Q13003 919 aa15.56■□□□□ 0.08
CTSA-211ENST00000606066 KNOP1Q1ED39 458 aaKnown RBP15.56■□□□□ 0.08
CTSA-211ENST00000606066 SLC39A4Q6P5W5 647 aa15.56■□□□□ 0.08
CTSA-211ENST00000606066 LRRC55Q6ZSA7 311 aa15.56■□□□□ 0.08
CTSA-211ENST00000606066 CEP120Q8N960 986 aa15.56■□□□□ 0.08
CTSA-211ENST00000606066 FBXO22Q8NEZ5 403 aa15.56■□□□□ 0.08
CTSA-211ENST00000606066 GOLGA5Q8TBA6 731 aa15.56■□□□□ 0.08
CTSA-211ENST00000606066 HLA-CQ95604 372 aa15.56■□□□□ 0.08
CTSA-211ENST00000606066 FAM122AQ96E09 287 aa15.56■□□□□ 0.08
CTSA-211ENST00000606066 ZFP42Q96MM3 310 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms