RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 CXCL16Q9H2A7 254 aa18.02■□□□□ 0.48
TUBE1-206ENST00000603722 SFXN1Q9H9B4 322 aa18.02■□□□□ 0.48
TUBE1-206ENST00000603722 KMT5AQ9NQR1 393 aa18.02■□□□□ 0.48
TUBE1-206ENST00000603722 ADAM28Q9UKQ2 775 aa18.02■□□□□ 0.48
TUBE1-206ENST00000603722 SSX2IPQ9Y2D8 614 aa18.02■□□□□ 0.48
TUBE1-206ENST00000603722 TEX28O15482 410 aa18.01■□□□□ 0.47
TUBE1-206ENST00000603722 TADA2AO75478 443 aa18.01■□□□□ 0.47
TUBE1-206ENST00000603722 THP07101 528 aa18.01■□□□□ 0.47
TUBE1-206ENST00000603722 GUCY2CP25092 1073 aa18.01■□□□□ 0.47
TUBE1-206ENST00000603722 MTHFRP42898 656 aa18.01■□□□□ 0.47
TUBE1-206ENST00000603722 DSG1Q02413 1049 aa18.01■□□□□ 0.47
TUBE1-206ENST00000603722 HSP90AA2PQ14568 343 aaPredicted RBP18.01■□□□□ 0.47
TUBE1-206ENST00000603722 KIAA0319Q5VV43 1072 aa18.01■□□□□ 0.47
TUBE1-206ENST00000603722 BRAPQ7Z569 592 aa18.01■□□□□ 0.47
TUBE1-206ENST00000603722 HASPINQ8TF76 798 aa18.01■□□□□ 0.47
TUBE1-206ENST00000603722 EDAQ92838 391 aa18.01■□□□□ 0.47
TUBE1-206ENST00000603722 GPR62Q9BZJ7 368 aa18.01■□□□□ 0.47
TUBE1-206ENST00000603722 NT5C3AQ9H0P0 336 aa18.01■□□□□ 0.47
TUBE1-206ENST00000603722 ARHGAP28Q9P2N2 729 aa18.01■□□□□ 0.47
TUBE1-206ENST00000603722 NR2E1Q9Y466 385 aa18.01■□□□□ 0.47
TUBE1-206ENST00000603722 SFI1A8K8P3 1242 aa18■□□□□ 0.47
TUBE1-206ENST00000603722 KIF4AO95239 1232 aa18■□□□□ 0.47
TUBE1-206ENST00000603722 ADH1AP07327 375 aa18■□□□□ 0.47
TUBE1-206ENST00000603722 PLA2G4BP0C869 781 aa18■□□□□ 0.47
TUBE1-206ENST00000603722 ZNF568Q3ZCX4 644 aa18■□□□□ 0.47
TUBE1-206ENST00000603722 TMEM119Q4V9L6 283 aa18■□□□□ 0.47
TUBE1-206ENST00000603722 GLRA4Q5JXX5 417 aa18■□□□□ 0.47
TUBE1-206ENST00000603722 TAS1R3Q7RTX0 852 aa18■□□□□ 0.47
TUBE1-206ENST00000603722 APBB1IPQ7Z5R6 666 aaPredicted RBP18■□□□□ 0.47
TUBE1-206ENST00000603722 SYT2Q8N9I0 419 aaPredicted RBP18■□□□□ 0.47
TUBE1-206ENST00000603722 TIPINQ9BVW5 301 aa18■□□□□ 0.47
TUBE1-206ENST00000603722 MRPL4Q9BYD3 311 aaKnown RBP18■□□□□ 0.47
TUBE1-206ENST00000603722 CDT1Q9H211 546 aa18■□□□□ 0.47
TUBE1-206ENST00000603722 TMEM134Q9H6X4 195 aa18■□□□□ 0.47
TUBE1-206ENST00000603722 RXFP1Q9HBX9 757 aa18■□□□□ 0.47
TUBE1-206ENST00000603722 MAN1C1Q9NR34 630 aa18■□□□□ 0.47
TUBE1-206ENST00000603722 CHST7Q9NS84 486 aa18■□□□□ 0.47
TUBE1-206ENST00000603722 TNFSF13BQ9Y275 285 aa18■□□□□ 0.47
TUBE1-206ENST00000603722 SF3B1O75533 1304 aaKnown RBP eCLIP17.99■□□□□ 0.47
TUBE1-206ENST00000603722 C2CD4DB7Z1M9 353 aa17.99■□□□□ 0.47
TUBE1-206ENST00000603722 SLC16A4O15374 487 aa17.99■□□□□ 0.47
TUBE1-206ENST00000603722 GLUD1P00367 558 aa17.99■□□□□ 0.47
TUBE1-206ENST00000603722 MYBP10242 640 aa17.99■□□□□ 0.47
TUBE1-206ENST00000603722 SLC12A3P55017 1021 aa17.99■□□□□ 0.47
TUBE1-206ENST00000603722 ZXDAP98168 799 aa17.99■□□□□ 0.47
TUBE1-206ENST00000603722 NAB2Q15742 525 aa17.99■□□□□ 0.47
TUBE1-206ENST00000603722 USP41Q3LFD5 358 aa17.99■□□□□ 0.47
TUBE1-206ENST00000603722 ATAT1Q5SQI0 421 aa17.99■□□□□ 0.47
TUBE1-206ENST00000603722 HFE2Q6ZVN8 426 aa17.99■□□□□ 0.47
TUBE1-206ENST00000603722 CEP120Q8N960 986 aa17.99■□□□□ 0.47
TUBE1-206ENST00000603722 RIN2Q8WYP3 895 aaPredicted RBP17.99■□□□□ 0.47
TUBE1-206ENST00000603722 AK8Q96MA6 479 aa17.99■□□□□ 0.47
TUBE1-206ENST00000603722 ACO2Q99798 780 aaKnown RBP17.99■□□□□ 0.47
TUBE1-206ENST00000603722 TARS2Q9BW92 718 aaKnown RBP17.99■□□□□ 0.47
TUBE1-206ENST00000603722 BACH2Q9BYV9 841 aa17.99■□□□□ 0.47
TUBE1-206ENST00000603722 C17orf75Q9HAS0 396 aa17.99■□□□□ 0.47
TUBE1-206ENST00000603722 NPHP3-ACAD11A0A0J9YXS1 232 aa17.98■□□□□ 0.47
TUBE1-206ENST00000603722 BMP15O95972 392 aa17.98■□□□□ 0.47
TUBE1-206ENST00000603722 PLS3P13797 630 aa17.98■□□□□ 0.47
TUBE1-206ENST00000603722 OSTNP61366 133 aa17.98■□□□□ 0.47
TUBE1-206ENST00000603722 CACNB1Q02641 598 aaPredicted RBP17.98■□□□□ 0.47
TUBE1-206ENST00000603722 GRIN1Q05586 938 aa17.98■□□□□ 0.47
TUBE1-206ENST00000603722 SF3A1Q15459 793 aaKnown RBP17.98■□□□□ 0.47
TUBE1-206ENST00000603722 PTPN21Q16825 1174 aa17.98■□□□□ 0.47
TUBE1-206ENST00000603722 RTP2Q5QGT7 225 aa17.98■□□□□ 0.47
TUBE1-206ENST00000603722 GPR149Q86SP6 731 aa17.98■□□□□ 0.47
TUBE1-206ENST00000603722 ZBTB33Q86T24 672 aa17.98■□□□□ 0.47
TUBE1-206ENST00000603722 GLYCTKQ8IVS8 523 aa17.98■□□□□ 0.47
TUBE1-206ENST00000603722 KCTD17Q8N5Z5 321 aa17.98■□□□□ 0.47
TUBE1-206ENST00000603722 TDRD5Q8NAT2 981 aaKnown RBP17.98■□□□□ 0.47
TUBE1-206ENST00000603722 PTPRHQ9HD43 1115 aa17.98■□□□□ 0.47
TUBE1-206ENST00000603722 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.98■□□□□ 0.47
TUBE1-206ENST00000603722 RBM19Q9Y4C8 960 aaKnown RBP17.98■□□□□ 0.47
TUBE1-206ENST00000603722 HARSP12081 509 aaKnown RBP17.97■□□□□ 0.47
TUBE1-206ENST00000603722 RPL17P18621 184 aaKnown RBP17.97■□□□□ 0.47
TUBE1-206ENST00000603722 PDCP20941 246 aa17.97■□□□□ 0.47
TUBE1-206ENST00000603722 UBA7P41226 1012 aa17.97■□□□□ 0.47
TUBE1-206ENST00000603722 GRM5P41594 1212 aa17.97■□□□□ 0.47
TUBE1-206ENST00000603722 PRSS55Q6UWB4 352 aaPredicted RBP17.97■□□□□ 0.47
TUBE1-206ENST00000603722 TRIM67Q6ZTA4 783 aa17.97■□□□□ 0.47
TUBE1-206ENST00000603722 PALB2Q86YC2 1186 aa17.97■□□□□ 0.47
TUBE1-206ENST00000603722 RASSF8Q8NHQ8 419 aa17.97■□□□□ 0.47
TUBE1-206ENST00000603722 LRRC15Q8TF66 581 aa17.97■□□□□ 0.47
TUBE1-206ENST00000603722 SPIRE2Q8WWL2 714 aa17.97■□□□□ 0.47
TUBE1-206ENST00000603722 CALML4Q96GE6 196 aa17.97■□□□□ 0.47
TUBE1-206ENST00000603722 CCDC94Q9BW85 323 aaPredicted RBP17.97■□□□□ 0.47
TUBE1-206ENST00000603722 KCND2Q9NZV8 630 aa17.97■□□□□ 0.47
TUBE1-206ENST00000603722 TMEM221A6NGB7 291 aa17.96■□□□□ 0.47
TUBE1-206ENST00000603722 M0R296 226 aa17.96■□□□□ 0.47
TUBE1-206ENST00000603722 SPATA31D3P0C874 917 aa17.96■□□□□ 0.47
TUBE1-206ENST00000603722 SMTNP53814 917 aa17.96■□□□□ 0.47
TUBE1-206ENST00000603722 YARSP54577 528 aaKnown RBP17.96■□□□□ 0.47
TUBE1-206ENST00000603722 CREMQ03060 361 aa17.96■□□□□ 0.47
TUBE1-206ENST00000603722 STRN3Q13033 797 aa17.96■□□□□ 0.47
TUBE1-206ENST00000603722 FAM171A1Q5VUB5 890 aa17.96■□□□□ 0.47
TUBE1-206ENST00000603722 ELMSAN1Q6PJG2 1045 aa17.96■□□□□ 0.47
TUBE1-206ENST00000603722 MPZL3Q6UWV2 235 aa17.96■□□□□ 0.47
TUBE1-206ENST00000603722 SPATA31D4Q6ZUB0 917 aa17.96■□□□□ 0.47
TUBE1-206ENST00000603722 CCDC149Q6ZUS6 474 aa17.96■□□□□ 0.47
TUBE1-206ENST00000603722 CEP57Q86XR8 500 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms