RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 XKR4Q5GH76 650 aa15.16■□□□□ 0.02
RNF40-212ENST00000602784 ALKAL1Q6UXT8 129 aa15.16■□□□□ 0.02
RNF40-212ENST00000602784 TMEM192Q8IY95 271 aa15.16■□□□□ 0.02
RNF40-212ENST00000602784 KIAA0895Q8NCT3 520 aa15.16■□□□□ 0.02
RNF40-212ENST00000602784 GSTCDQ8NEC7 633 aa15.16■□□□□ 0.02
RNF40-212ENST00000602784 SMARCE1Q969G3 411 aa15.16■□□□□ 0.02
RNF40-212ENST00000602784 ACAP3Q96P50 834 aa15.16■□□□□ 0.02
RNF40-212ENST00000602784 APOL6Q9BWW8 343 aa15.16■□□□□ 0.02
RNF40-212ENST00000602784 GBP3Q9H0R5 595 aa15.16■□□□□ 0.02
RNF40-212ENST00000602784 CWH43Q9H720 699 aa15.16■□□□□ 0.02
RNF40-212ENST00000602784 AAASQ9NRG9 546 aa15.16■□□□□ 0.02
RNF40-212ENST00000602784 TBC1D13Q9NVG8 400 aa15.16■□□□□ 0.02
RNF40-212ENST00000602784 CGNQ9P2M7 1197 aaKnown RBP15.16■□□□□ 0.02
RNF40-212ENST00000602784 PCDHA5Q9Y5H7 936 aa15.16■□□□□ 0.02
RNF40-212ENST00000602784 KIAA0391O15091 583 aaKnown RBP15.15■□□□□ 0.02
RNF40-212ENST00000602784 FAM189A1O60320 539 aa15.15■□□□□ 0.02
RNF40-212ENST00000602784 LAG3P18627 525 aa15.15■□□□□ 0.02
RNF40-212ENST00000602784 MLH1P40692 756 aa15.15■□□□□ 0.02
RNF40-212ENST00000602784 KNOP1Q1ED39 458 aaKnown RBP15.15■□□□□ 0.02
RNF40-212ENST00000602784 EPC2Q52LR7 807 aa15.15■□□□□ 0.02
RNF40-212ENST00000602784 THNSL1Q8IYQ7 743 aa15.15■□□□□ 0.02
RNF40-212ENST00000602784 DEFB123Q8N688 67 aa15.15■□□□□ 0.02
RNF40-212ENST00000602784 POMGNT1Q8WZA1 660 aa15.15■□□□□ 0.02
RNF40-212ENST00000602784 ZFP42Q96MM3 310 aa15.15■□□□□ 0.02
RNF40-212ENST00000602784 MSTO1Q9BUK6 570 aa15.15■□□□□ 0.02
RNF40-212ENST00000602784 PLEKHA5Q9HAU0 1116 aa15.15■□□□□ 0.02
RNF40-212ENST00000602784 AGO2Q9UKV8 859 aaKnown RBP15.15■□□□□ 0.02
RNF40-212ENST00000602784 INPP5FQ9Y2H2 1132 aa15.15■□□□□ 0.02
RNF40-212ENST00000602784 GDAQ9Y2T3 454 aa15.15■□□□□ 0.02
RNF40-212ENST00000602784 CHD7Q9P2D1 2997 aa15.14■□□□□ 0.01
RNF40-212ENST00000602784 TISP43B9A030 160 aa15.14■□□□□ 0.01
RNF40-212ENST00000602784 TGFB1I1O43294 461 aa15.14■□□□□ 0.01
RNF40-212ENST00000602784 ADRB2P07550 413 aa15.14■□□□□ 0.01
RNF40-212ENST00000602784 AFF1P51825 1210 aaKnown RBP15.14■□□□□ 0.01
RNF40-212ENST00000602784 RNASELQ05823 741 aaKnown RBP15.14■□□□□ 0.01
RNF40-212ENST00000602784 GRIK3Q13003 919 aa15.14■□□□□ 0.01
RNF40-212ENST00000602784 COBLL1Q53SF7 1204 aa15.14■□□□□ 0.01
RNF40-212ENST00000602784 HS2ST1Q7LGA3 356 aa15.14■□□□□ 0.01
RNF40-212ENST00000602784 GUF1Q8N442 669 aaKnown RBP15.14■□□□□ 0.01
RNF40-212ENST00000602784 CEP120Q8N960 986 aa15.14■□□□□ 0.01
RNF40-212ENST00000602784 GOLGA5Q8TBA6 731 aa15.14■□□□□ 0.01
RNF40-212ENST00000602784 TMEM174Q8WUU8 243 aa15.14■□□□□ 0.01
RNF40-212ENST00000602784 P2RX5Q93086 422 aa15.14■□□□□ 0.01
RNF40-212ENST00000602784 RPS6KC1Q96S38 1066 aa15.14■□□□□ 0.01
RNF40-212ENST00000602784 TSPAN18Q96SJ8 248 aa15.14■□□□□ 0.01
RNF40-212ENST00000602784 C17orf80Q9BSJ5 609 aa15.14■□□□□ 0.01
RNF40-212ENST00000602784 IKZF4Q9H2S9 585 aa15.14■□□□□ 0.01
RNF40-212ENST00000602784 KLK14Q9P0G3 267 aa15.14■□□□□ 0.01
RNF40-212ENST00000602784 CPSF3Q9UKF6 684 aaKnown RBP15.14■□□□□ 0.01
RNF40-212ENST00000602784 PCDHB12Q9Y5F1 795 aa15.14■□□□□ 0.01
RNF40-212ENST00000602784 RALGAPA2Q2PPJ7 1873 aa15.14■□□□□ 0.01
RNF40-212ENST00000602784 PTGESO14684 152 aa15.13■□□□□ 0.01
RNF40-212ENST00000602784 LDHAP00338 332 aaKnown RBP15.13■□□□□ 0.01
RNF40-212ENST00000602784 POMCP01189 267 aa15.13■□□□□ 0.01
RNF40-212ENST00000602784 THP07101 528 aa15.13■□□□□ 0.01
RNF40-212ENST00000602784 HARSP12081 509 aaKnown RBP15.13■□□□□ 0.01
RNF40-212ENST00000602784 KCNE1P15382 129 aa15.13■□□□□ 0.01
RNF40-212ENST00000602784 CTNNB1P35222 781 aa15.13■□□□□ 0.01
RNF40-212ENST00000602784 ALDH7A1P49419 539 aaKnown RBP15.13■□□□□ 0.01
RNF40-212ENST00000602784 SCNN1GP51170 649 aa15.13■□□□□ 0.01
RNF40-212ENST00000602784 OSTNP61366 133 aa15.13■□□□□ 0.01
RNF40-212ENST00000602784 DSC1Q08554 894 aa15.13■□□□□ 0.01
RNF40-212ENST00000602784 HSP90AA2PQ14568 343 aaPredicted RBP15.13■□□□□ 0.01
RNF40-212ENST00000602784 GRIN2CQ14957 1233 aa15.13■□□□□ 0.01
RNF40-212ENST00000602784 SLC10A6Q3KNW5 377 aa15.13■□□□□ 0.01
RNF40-212ENST00000602784 SPOUT1Q5T280 376 aaKnown RBP15.13■□□□□ 0.01
RNF40-212ENST00000602784 ZNF658Q5TYW1 1059 aaPredicted RBP15.13■□□□□ 0.01
RNF40-212ENST00000602784 KCNT2Q6UVM3 1135 aa15.13■□□□□ 0.01
RNF40-212ENST00000602784 C12orf56Q8IXR9 622 aa15.13■□□□□ 0.01
RNF40-212ENST00000602784 COLGALT1Q8NBJ5 622 aa15.13■□□□□ 0.01
RNF40-212ENST00000602784 FBXO22Q8NEZ5 403 aa15.13■□□□□ 0.01
RNF40-212ENST00000602784 ARNTL2Q8WYA1 636 aa15.13■□□□□ 0.01
RNF40-212ENST00000602784 SNX27Q96L92 541 aa15.13■□□□□ 0.01
RNF40-212ENST00000602784 ZNF558Q96NG5 402 aa15.13■□□□□ 0.01
RNF40-212ENST00000602784 FAM193BQ96PV7 902 aaPredicted RBP15.13■□□□□ 0.01
RNF40-212ENST00000602784 TMEM175Q9BSA9 504 aa15.13■□□□□ 0.01
RNF40-212ENST00000602784 C11orf84Q9BUA3 381 aaPredicted RBP15.13■□□□□ 0.01
RNF40-212ENST00000602784 NRDE2Q9H7Z3 1164 aa15.13■□□□□ 0.01
RNF40-212ENST00000602784 KIAA1586Q9HCI6 787 aa15.13■□□□□ 0.01
RNF40-212ENST00000602784 MIOSQ9NXC5 875 aa15.13■□□□□ 0.01
RNF40-212ENST00000602784 CNTN3Q9P232 1028 aa15.13■□□□□ 0.01
RNF40-212ENST00000602784 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.13■□□□□ 0.01
RNF40-212ENST00000602784 TRANK1O15050 2925 aa15.13■□□□□ 0.01
RNF40-212ENST00000602784 SMIM28A0A1B0GU29 152 aa15.12■□□□□ 0.01
RNF40-212ENST00000602784 TTC26A0AVF1 554 aa15.12■□□□□ 0.01
RNF40-212ENST00000602784 H3BNC9 293 aa15.12■□□□□ 0.01
RNF40-212ENST00000602784 PDXKO00764 312 aa15.12■□□□□ 0.01
RNF40-212ENST00000602784 EXTL3O43909 919 aa15.12■□□□□ 0.01
RNF40-212ENST00000602784 DDHD2O94830 711 aa15.12■□□□□ 0.01
RNF40-212ENST00000602784 ALDH2P05091 517 aa15.12■□□□□ 0.01
RNF40-212ENST00000602784 PPM1AP35813 382 aa15.12■□□□□ 0.01
RNF40-212ENST00000602784 BCAR1P56945 870 aa15.12■□□□□ 0.01
RNF40-212ENST00000602784 ENOX2Q16206 610 aaKnown RBP15.12■□□□□ 0.01
RNF40-212ENST00000602784 ARMCX5Q6P1M9 558 aa15.12■□□□□ 0.01
RNF40-212ENST00000602784 SPRED2Q7Z698 418 aa15.12■□□□□ 0.01
RNF40-212ENST00000602784 ZNF280BQ86YH2 543 aa15.12■□□□□ 0.01
RNF40-212ENST00000602784 CD302Q8IX05 232 aa15.12■□□□□ 0.01
RNF40-212ENST00000602784 NELFCDQ8IXH7 590 aa15.12■□□□□ 0.01
RNF40-212ENST00000602784 COLGALT2Q8IYK4 626 aa15.12■□□□□ 0.01
RNF40-212ENST00000602784 CBWD1Q9BRT8 395 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms