RNA–Protein interactions for RNA: ENST00000602173.5

RAB4B-208, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB4B, Length 592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-208ENST00000602173 SPDYE4A6NLX3 237 aa13.8□□□□□ -0.2
RAB4B-208ENST00000602173 GLUD1P00367 558 aa13.8□□□□□ -0.2
RAB4B-208ENST00000602173 PDGFBP01127 241 aaPredicted RBP13.8□□□□□ -0.2
RAB4B-208ENST00000602173 AVPR2P30518 371 aa13.8□□□□□ -0.2
RAB4B-208ENST00000602173 PTGDRQ13258 359 aa13.8□□□□□ -0.2
RAB4B-208ENST00000602173 TUSC3Q13454 348 aa13.8□□□□□ -0.2
RAB4B-208ENST00000602173 PPP2R5AQ15172 486 aa13.8□□□□□ -0.2
RAB4B-208ENST00000602173 USP41Q3LFD5 358 aa13.8□□□□□ -0.2
RAB4B-208ENST00000602173 EEF1DP3Q658K8 133 aa13.8□□□□□ -0.2
RAB4B-208ENST00000602173 CCDC149Q6ZUS6 474 aa13.8□□□□□ -0.2
RAB4B-208ENST00000602173 IGSF22Q8N9C0 903 aa13.8□□□□□ -0.2
RAB4B-208ENST00000602173 DEPTORQ8TB45 409 aa13.8□□□□□ -0.2
RAB4B-208ENST00000602173 PAAF1Q9BRP4 392 aa13.8□□□□□ -0.2
RAB4B-208ENST00000602173 RHOBTB2Q9BYZ6 727 aa13.8□□□□□ -0.2
RAB4B-208ENST00000602173 CXCL16Q9H2A7 254 aa13.8□□□□□ -0.2
RAB4B-208ENST00000602173 BHMT2Q9H2M3 363 aa13.8□□□□□ -0.2
RAB4B-208ENST00000602173 SNTG2Q9NY99 539 aa13.8□□□□□ -0.2
RAB4B-208ENST00000602173 KIAA1024Q9UPX6 916 aa13.8□□□□□ -0.2
RAB4B-208ENST00000602173 PCDHB6Q9Y5E3 794 aa13.8□□□□□ -0.2
RAB4B-208ENST00000602173 CCDC195A0A1B0GUA6 201 aa13.79□□□□□ -0.2
RAB4B-208ENST00000602173 PTGESO14684 152 aa13.79□□□□□ -0.2
RAB4B-208ENST00000602173 RECQL4O94761 1208 aa13.79□□□□□ -0.2
RAB4B-208ENST00000602173 PAPLNO95428 1278 aa13.79□□□□□ -0.2
RAB4B-208ENST00000602173 C1RP00736 705 aa13.79□□□□□ -0.2
RAB4B-208ENST00000602173 MRE11P49959 708 aa13.79□□□□□ -0.2
RAB4B-208ENST00000602173 EFNA5P52803 228 aa13.79□□□□□ -0.2
RAB4B-208ENST00000602173 HSP90AA2PQ14568 343 aaPredicted RBP13.79□□□□□ -0.2
RAB4B-208ENST00000602173 NAB2Q15742 525 aa13.79□□□□□ -0.2
RAB4B-208ENST00000602173 IL17AQ16552 155 aa13.79□□□□□ -0.2
RAB4B-208ENST00000602173 NT5DC1Q5TFE4 455 aa13.79□□□□□ -0.2
RAB4B-208ENST00000602173 OTOP3Q7RTS5 596 aa13.79□□□□□ -0.2
RAB4B-208ENST00000602173 RIN2Q8WYP3 895 aaPredicted RBP13.79□□□□□ -0.2
RAB4B-208ENST00000602173 KIFAP3Q92845 792 aa13.79□□□□□ -0.2
RAB4B-208ENST00000602173 ACSF2Q96CM8 615 aaPredicted RBP13.79□□□□□ -0.2
RAB4B-208ENST00000602173 PRRX2Q99811 253 aa13.79□□□□□ -0.2
RAB4B-208ENST00000602173 KIFC3Q9BVG8 833 aa13.79□□□□□ -0.2
RAB4B-208ENST00000602173 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.79□□□□□ -0.2
RAB4B-208ENST00000602173 DDX19AQ9NUU7 478 aaKnown RBP13.79□□□□□ -0.2
RAB4B-208ENST00000602173 FNIP2Q9P278 1114 aa13.79□□□□□ -0.2
RAB4B-208ENST00000602173 DPP7Q9UHL4 492 aa13.79□□□□□ -0.2
RAB4B-208ENST00000602173 NOTCH4Q99466 2003 aa13.79□□□□□ -0.2
RAB4B-208ENST00000602173 CASTOR2A6NHX0 329 aa13.78□□□□□ -0.2
RAB4B-208ENST00000602173 TADA2AO75478 443 aa13.78□□□□□ -0.2
RAB4B-208ENST00000602173 RFPL2O75678 378 aa13.78□□□□□ -0.2
RAB4B-208ENST00000602173 SPATA31D3P0C874 917 aa13.78□□□□□ -0.2
RAB4B-208ENST00000602173 MYBP10242 640 aa13.78□□□□□ -0.2
RAB4B-208ENST00000602173 LIG1P18858 919 aa13.78□□□□□ -0.2
RAB4B-208ENST00000602173 TCF15Q12870 199 aa13.78□□□□□ -0.2
RAB4B-208ENST00000602173 TMEM132AQ24JP5 1023 aa13.78□□□□□ -0.2
RAB4B-208ENST00000602173 LILRA6Q6PI73 481 aa13.78□□□□□ -0.2
RAB4B-208ENST00000602173 CYP26C1Q6V0L0 522 aa13.78□□□□□ -0.2
RAB4B-208ENST00000602173 SPATA31D4Q6ZUB0 917 aa13.78□□□□□ -0.2
RAB4B-208ENST00000602173 PALB2Q86YC2 1186 aa13.78□□□□□ -0.2
RAB4B-208ENST00000602173 SNX29Q8TEQ0 813 aa13.78□□□□□ -0.2
RAB4B-208ENST00000602173 HDAC7Q8WUI4 952 aa13.78□□□□□ -0.2
RAB4B-208ENST00000602173 IFT74Q96LB3 600 aa13.78□□□□□ -0.2
RAB4B-208ENST00000602173 ADPGKQ9BRR6 497 aa13.78□□□□□ -0.2
RAB4B-208ENST00000602173 PLEKHA4Q9H4M7 779 aa13.78□□□□□ -0.2
RAB4B-208ENST00000602173 WDR6Q9NNW5 1121 aaKnown RBP13.78□□□□□ -0.2
RAB4B-208ENST00000602173 STK24Q9Y6E0 443 aa13.78□□□□□ -0.2
RAB4B-208ENST00000602173 MYH15Q9Y2K3 1946 aa13.78□□□□□ -0.2
RAB4B-208ENST00000602173 PP2D1A8MPX8 630 aa13.77□□□□□ -0.21
RAB4B-208ENST00000602173 E9PMD0 336 aa13.77□□□□□ -0.21
RAB4B-208ENST00000602173 LAD1O00515 517 aa13.77□□□□□ -0.21
RAB4B-208ENST00000602173 TGM5O43548 720 aa13.77□□□□□ -0.21
RAB4B-208ENST00000602173 N4BP1O75113 896 aaKnown RBP13.77□□□□□ -0.21
RAB4B-208ENST00000602173 SF3B1O75533 1304 aaKnown RBP eCLIP13.77□□□□□ -0.21
RAB4B-208ENST00000602173 KIF4AO95239 1232 aa13.77□□□□□ -0.21
RAB4B-208ENST00000602173 THP07101 528 aa13.77□□□□□ -0.21
RAB4B-208ENST00000602173 RPL17P18621 184 aaKnown RBP13.77□□□□□ -0.21
RAB4B-208ENST00000602173 PRPHP41219 470 aa13.77□□□□□ -0.21
RAB4B-208ENST00000602173 PTPN5P54829 565 aa13.77□□□□□ -0.21
RAB4B-208ENST00000602173 RABEP1Q15276 862 aa13.77□□□□□ -0.21
RAB4B-208ENST00000602173 DCAF4L1Q3SXM0 396 aa13.77□□□□□ -0.21
RAB4B-208ENST00000602173 RTP2Q5QGT7 225 aa13.77□□□□□ -0.21
RAB4B-208ENST00000602173 ELMSAN1Q6PJG2 1045 aa13.77□□□□□ -0.21
RAB4B-208ENST00000602173 PRSS55Q6UWB4 352 aaPredicted RBP13.77□□□□□ -0.21
RAB4B-208ENST00000602173 GLYCTKQ8IVS8 523 aa13.77□□□□□ -0.21
RAB4B-208ENST00000602173 HASPINQ8TF76 798 aa13.77□□□□□ -0.21
RAB4B-208ENST00000602173 ZNF707Q96C28 371 aaPredicted RBP13.77□□□□□ -0.21
RAB4B-208ENST00000602173 TBC1D32Q96NH3 1257 aa13.77□□□□□ -0.21
RAB4B-208ENST00000602173 MMTAG2Q9BU76 263 aaKnown RBP13.77□□□□□ -0.21
RAB4B-208ENST00000602173 RAB34Q9BZG1 259 aa13.77□□□□□ -0.21
RAB4B-208ENST00000602173 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.77□□□□□ -0.21
RAB4B-208ENST00000602173 DAXXQ9UER7 740 aaPredicted RBP13.77□□□□□ -0.21
RAB4B-208ENST00000602173 DNM3Q9UQ16 869 aa13.77□□□□□ -0.21
RAB4B-208ENST00000602173 K7ERI5 159 aa13.76□□□□□ -0.21
RAB4B-208ENST00000602173 CDC25AP30304 524 aa13.76□□□□□ -0.21
RAB4B-208ENST00000602173 TDGQ13569 410 aa13.76□□□□□ -0.21
RAB4B-208ENST00000602173 ATF7IP2Q5U623 682 aa13.76□□□□□ -0.21
RAB4B-208ENST00000602173 FAM171A1Q5VUB5 890 aa13.76□□□□□ -0.21
RAB4B-208ENST00000602173 KRT79Q5XKE5 535 aa13.76□□□□□ -0.21
RAB4B-208ENST00000602173 DAW1Q8N136 415 aa13.76□□□□□ -0.21
RAB4B-208ENST00000602173 SMG7Q92540 1137 aaKnown RBP13.76□□□□□ -0.21
RAB4B-208ENST00000602173 PHOX2BQ99453 314 aa13.76□□□□□ -0.21
RAB4B-208ENST00000602173 RUSC1Q9BVN2 902 aa13.76□□□□□ -0.21
RAB4B-208ENST00000602173 NT5C3AQ9H0P0 336 aa13.76□□□□□ -0.21
RAB4B-208ENST00000602173 KCNK12Q9HB15 430 aa13.76□□□□□ -0.21
RAB4B-208ENST00000602173 ZDHHC7Q9NXF8 308 aa13.76□□□□□ -0.21
RAB4B-208ENST00000602173 GDAQ9Y2T3 454 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms