RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 PTGESO14684 152 aa18.33■□□□□ 0.52
SSBP4-213ENST00000602088 GAP43P17677 238 aa18.33■□□□□ 0.52
SSBP4-213ENST00000602088 ABCD1P33897 745 aa18.33■□□□□ 0.52
SSBP4-213ENST00000602088 GTF2F1P35269 517 aaKnown RBP eCLIP18.33■□□□□ 0.528e-7■■■■□ 26.1
SSBP4-213ENST00000602088 GRM5P41594 1212 aa18.33■□□□□ 0.52
SSBP4-213ENST00000602088 OR1G1P47890 313 aa18.33■□□□□ 0.52
SSBP4-213ENST00000602088 AAK1Q2M2I8 961 aa18.33■□□□□ 0.52
SSBP4-213ENST00000602088 CTC1Q2NKJ3 1217 aa18.33■□□□□ 0.52
SSBP4-213ENST00000602088 TMC7Q7Z402 723 aa18.33■□□□□ 0.52
SSBP4-213ENST00000602088 SFR1Q86XK3 245 aa18.33■□□□□ 0.52
SSBP4-213ENST00000602088 DHX58Q96C10 678 aa18.33■□□□□ 0.52
SSBP4-213ENST00000602088 SPATA32Q96LK8 384 aa18.33■□□□□ 0.52
SSBP4-213ENST00000602088 TNMDQ9H2S6 317 aa18.33■□□□□ 0.52
SSBP4-213ENST00000602088 IGFLR1Q9H665 355 aa18.33■□□□□ 0.52
SSBP4-213ENST00000602088 ENTPD7Q9NQZ7 604 aa18.33■□□□□ 0.52
SSBP4-213ENST00000602088 KBTBD4Q9NVX7 518 aa18.33■□□□□ 0.52
SSBP4-213ENST00000602088 SEL1LQ9UBV2 794 aa18.33■□□□□ 0.52
SSBP4-213ENST00000602088 SPTBN5Q9NRC6 3674 aaKnown RBP18.33■□□□□ 0.52
SSBP4-213ENST00000602088 POLR2DO15514 142 aaKnown RBP18.32■□□□□ 0.52
SSBP4-213ENST00000602088 CLDN3O15551 220 aa18.32■□□□□ 0.52
SSBP4-213ENST00000602088 NR1I2O75469 434 aa18.32■□□□□ 0.52
SSBP4-213ENST00000602088 PIGRP01833 764 aa18.32■□□□□ 0.52
SSBP4-213ENST00000602088 THP07101 528 aa18.32■□□□□ 0.52
SSBP4-213ENST00000602088 NRIP1P48552 1158 aa18.32■□□□□ 0.52
SSBP4-213ENST00000602088 MCL1Q07820 350 aa18.32■□□□□ 0.52
SSBP4-213ENST00000602088 ADAM15Q13444 863 aa18.32■□□□□ 0.52
SSBP4-213ENST00000602088 NAB2Q15742 525 aa18.32■□□□□ 0.52
SSBP4-213ENST00000602088 ZC2HC1CQ53FD0 456 aaPredicted RBP18.32■□□□□ 0.52
SSBP4-213ENST00000602088 TJAP1Q5JTD0 557 aa18.32■□□□□ 0.52
SSBP4-213ENST00000602088 PLPP4Q5VZY2 271 aa18.32■□□□□ 0.52
SSBP4-213ENST00000602088 ZNF720Q7Z2F6 126 aa18.32■□□□□ 0.52
SSBP4-213ENST00000602088 RBM23Q86U06 439 aaKnown RBP18.32■□□□□ 0.52
SSBP4-213ENST00000602088 MAP4K3Q8IVH8 894 aa18.32■□□□□ 0.52
SSBP4-213ENST00000602088 VPS52Q8N1B4 723 aa18.32■□□□□ 0.52
SSBP4-213ENST00000602088 STAMQ92783 540 aa18.32■□□□□ 0.52
SSBP4-213ENST00000602088 CCDC94Q9BW85 323 aaPredicted RBP18.32■□□□□ 0.52
SSBP4-213ENST00000602088 VN1R3Q9BXE9 311 aa18.32■□□□□ 0.52
SSBP4-213ENST00000602088 LRRC27Q9C0I9 530 aa18.32■□□□□ 0.52
SSBP4-213ENST00000602088 HAPLN2Q9GZV7 340 aa18.32■□□□□ 0.52
SSBP4-213ENST00000602088 TLE6Q9H808 572 aa18.32■□□□□ 0.52
SSBP4-213ENST00000602088 FAM13BQ9NYF5 915 aa18.32■□□□□ 0.52
SSBP4-213ENST00000602088 PRG3Q9Y2Y8 225 aaPredicted RBP18.32■□□□□ 0.52
SSBP4-213ENST00000602088 FRMD3A2A2Y4 597 aa18.31■□□□□ 0.52
SSBP4-213ENST00000602088 HIDE1A8MVS5 230 aa18.31■□□□□ 0.52
SSBP4-213ENST00000602088 KCNA5P22460 613 aa18.31■□□□□ 0.52
SSBP4-213ENST00000602088 LTBRP36941 435 aa18.31■□□□□ 0.52
SSBP4-213ENST00000602088 OSTNP61366 133 aa18.31■□□□□ 0.52
SSBP4-213ENST00000602088 TUSC3Q13454 348 aa18.31■□□□□ 0.52
SSBP4-213ENST00000602088 SMC1AQ14683 1233 aaKnown RBP18.31■□□□□ 0.52
SSBP4-213ENST00000602088 NOLC1Q14978 699 aaKnown RBP eCLIP18.31■□□□□ 0.52
SSBP4-213ENST00000602088 ADALQ6DHV7 355 aa18.31■□□□□ 0.52
SSBP4-213ENST00000602088 ALKAL1Q6UXT8 129 aa18.31■□□□□ 0.52
SSBP4-213ENST00000602088 MRPL43Q8N983 215 aaKnown RBP18.31■□□□□ 0.52
SSBP4-213ENST00000602088 BICD1Q96G01 975 aa18.31■□□□□ 0.52
SSBP4-213ENST00000602088 STRA6Q9BX79 667 aa18.31■□□□□ 0.52
SSBP4-213ENST00000602088 SCAND2PQ9GZW5 306 aaPredicted RBP18.31■□□□□ 0.52
SSBP4-213ENST00000602088 ZBP1Q9H171 429 aa18.31■□□□□ 0.52
SSBP4-213ENST00000602088 OLFML3Q9NRN5 406 aa18.31■□□□□ 0.52
SSBP4-213ENST00000602088 MARCH5Q9NX47 278 aa18.31■□□□□ 0.52
SSBP4-213ENST00000602088 CLDND1Q9NY35 253 aa18.31■□□□□ 0.52
SSBP4-213ENST00000602088 ANKFY1Q9P2R3 1169 aa18.31■□□□□ 0.52
SSBP4-213ENST00000602088 STK39Q9UEW8 545 aa18.31■□□□□ 0.52
SSBP4-213ENST00000602088 TCHHQ07283 1943 aa18.31■□□□□ 0.52
SSBP4-213ENST00000602088 TRIP11Q15643 1979 aa18.3■□□□□ 0.52
SSBP4-213ENST00000602088 F8W810 466 aa18.3■□□□□ 0.52
SSBP4-213ENST00000602088 HNRNPDLO14979 420 aaKnown RBP18.3■□□□□ 0.52
SSBP4-213ENST00000602088 PER2O15055 1255 aa18.3■□□□□ 0.52
SSBP4-213ENST00000602088 LINC01565O15544 149 aa18.3■□□□□ 0.52
SSBP4-213ENST00000602088 CXCL14O95715 111 aa18.3■□□□□ 0.52
SSBP4-213ENST00000602088 EFEMP2O95967 443 aa18.3■□□□□ 0.52
SSBP4-213ENST00000602088 HARSP12081 509 aaKnown RBP18.3■□□□□ 0.52
SSBP4-213ENST00000602088 IDEP14735 1019 aa18.3■□□□□ 0.52
SSBP4-213ENST00000602088 LIG4P49917 911 aa18.3■□□□□ 0.52
SSBP4-213ENST00000602088 KCNQ1P51787 676 aa18.3■□□□□ 0.52
SSBP4-213ENST00000602088 YARSP54577 528 aaKnown RBP18.3■□□□□ 0.52
SSBP4-213ENST00000602088 NUCB2P80303 420 aa18.3■□□□□ 0.52
SSBP4-213ENST00000602088 AMPD3Q01432 767 aa18.3■□□□□ 0.52
SSBP4-213ENST00000602088 XKR4Q5GH76 650 aa18.3■□□□□ 0.52
SSBP4-213ENST00000602088 HERC4Q5GLZ8 1057 aaPredicted RBP18.3■□□□□ 0.52
SSBP4-213ENST00000602088 EFHBQ8N7U6 833 aa18.3■□□□□ 0.52
SSBP4-213ENST00000602088 HVCN1Q96D96 273 aa18.3■□□□□ 0.52
SSBP4-213ENST00000602088 ACAP3Q96P50 834 aa18.3■□□□□ 0.52
SSBP4-213ENST00000602088 PPP1R10Q96QC0 940 aaKnown RBP18.3■□□□□ 0.52
SSBP4-213ENST00000602088 CDCA3Q99618 268 aaPredicted RBP18.3■□□□□ 0.52
SSBP4-213ENST00000602088 COLEC11Q9BWP8 271 aa18.3■□□□□ 0.52
SSBP4-213ENST00000602088 TRIM9Q9C026 710 aa18.3■□□□□ 0.52
SSBP4-213ENST00000602088 MRPL44Q9H9J2 332 aaKnown RBP18.3■□□□□ 0.52
SSBP4-213ENST00000602088 TOPORSQ9NS56 1045 aaPredicted RBP18.3■□□□□ 0.52
SSBP4-213ENST00000602088 PANK4Q9NVE7 773 aa18.3■□□□□ 0.52
SSBP4-213ENST00000602088 KCNH3Q9ULD8 1083 aa18.3■□□□□ 0.52
SSBP4-213ENST00000602088 IRAK3Q9Y616 596 aa18.3■□□□□ 0.52
SSBP4-213ENST00000602088 SMIM28A0A1B0GU29 152 aa18.29■□□□□ 0.52
SSBP4-213ENST00000602088 C2orf71A6NGG8 1288 aa18.29■□□□□ 0.52
SSBP4-213ENST00000602088 PPP1R37O75864 691 aa18.29■□□□□ 0.52
SSBP4-213ENST00000602088 CTSAP10619 480 aa18.29■□□□□ 0.52
SSBP4-213ENST00000602088 BMP1P13497 986 aa18.29■□□□□ 0.52
SSBP4-213ENST00000602088 CMA1P23946 247 aa18.29■□□□□ 0.52
SSBP4-213ENST00000602088 BMS1Q14692 1282 aaKnown RBP18.29■□□□□ 0.52
SSBP4-213ENST00000602088 DUSP6Q16828 381 aa18.29■□□□□ 0.52
SSBP4-213ENST00000602088 LEXMQ3ZCV2 418 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms