RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 SEZ6Q53EL9 994 aa24.51■■□□□ 1.51
IRF3-228ENST00000601291 NOC2LQ9Y3T9 749 aaKnown RBP24.51■■□□□ 1.51
IRF3-228ENST00000601291 GTF2H1P32780 548 aa24.5■■□□□ 1.51
IRF3-228ENST00000601291 TNFSF9P41273 254 aa24.5■■□□□ 1.51
IRF3-228ENST00000601291 GJA8P48165 433 aa24.5■■□□□ 1.51
IRF3-228ENST00000601291 MXI1P50539 228 aa24.5■■□□□ 1.51
IRF3-228ENST00000601291 SURF1Q15526 300 aa24.5■■□□□ 1.51
IRF3-228ENST00000601291 EXOC3L4Q17RC7 722 aa24.5■■□□□ 1.51
IRF3-228ENST00000601291 HS1BP3Q53T59 392 aa24.5■■□□□ 1.51
IRF3-228ENST00000601291 FAM26DQ5JW98 314 aa24.5■■□□□ 1.51
IRF3-228ENST00000601291 FAM228AQ86W67 206 aa24.5■■□□□ 1.51
IRF3-228ENST00000601291 CCDC51Q96ER9 411 aa24.5■■□□□ 1.51
IRF3-228ENST00000601291 CLTAP09496 248 aa24.5■■□□□ 1.51
IRF3-228ENST00000601291 GCLMP48507 274 aa24.5■■□□□ 1.51
IRF3-228ENST00000601291 KLK7P49862 253 aa24.5■■□□□ 1.51
IRF3-228ENST00000601291 POU5F1Q01860 360 aaKnown RBP24.5■■□□□ 1.51
IRF3-228ENST00000601291 PPP3CAQ08209 521 aa24.5■■□□□ 1.51
IRF3-228ENST00000601291 RBL2Q08999 1139 aa24.5■■□□□ 1.51
IRF3-228ENST00000601291 FIGNQ5HY92 759 aa24.5■■□□□ 1.51
IRF3-228ENST00000601291 C1orf220Q5T0J3 134 aa24.5■■□□□ 1.51
IRF3-228ENST00000601291 FAM126BQ8IXS8 530 aa24.5■■□□□ 1.51
IRF3-228ENST00000601291 ANKLE1Q8NAG6 615 aa24.5■■□□□ 1.51
IRF3-228ENST00000601291 NEK11Q8NG66 645 aa24.5■■□□□ 1.51
IRF3-228ENST00000601291 CAGE1Q8TC20 777 aa24.5■■□□□ 1.51
IRF3-228ENST00000601291 CRACR2AQ9BSW2 395 aa24.5■■□□□ 1.51
IRF3-228ENST00000601291 RPF1Q9H9Y2 349 aaKnown RBP24.5■■□□□ 1.51
IRF3-228ENST00000601291 GCNT4Q9P109 453 aa24.5■■□□□ 1.51
IRF3-228ENST00000601291 GPR182O15218 404 aa24.49■■□□□ 1.51
IRF3-228ENST00000601291 TLR3O15455 904 aaKnown RBP24.49■■□□□ 1.51
IRF3-228ENST00000601291 GYPCP04921 128 aa24.49■■□□□ 1.51
IRF3-228ENST00000601291 OSTNP61366 133 aa24.49■■□□□ 1.51
IRF3-228ENST00000601291 KCNMA1Q12791 1236 aa24.49■■□□□ 1.51
IRF3-228ENST00000601291 CBWD6Q4V339 395 aa24.49■■□□□ 1.51
IRF3-228ENST00000601291 CBWD3Q5JTY5 395 aa24.49■■□□□ 1.51
IRF3-228ENST00000601291 CBWD5Q5RIA9 395 aa24.49■■□□□ 1.51
IRF3-228ENST00000601291 KRT39Q6A163 491 aa24.49■■□□□ 1.51
IRF3-228ENST00000601291 CNGA4Q8IV77 575 aa24.49■■□□□ 1.51
IRF3-228ENST00000601291 CPLX3Q8WVH0 158 aa24.49■■□□□ 1.51
IRF3-228ENST00000601291 LSM14BQ9BX40 385 aaKnown RBP24.49■■□□□ 1.51
IRF3-228ENST00000601291 TRIM6Q9C030 488 aaPredicted RBP24.49■■□□□ 1.51
IRF3-228ENST00000601291 TMEM8AQ9HCN3 771 aa24.49■■□□□ 1.51
IRF3-228ENST00000601291 PDE11AQ9HCR9 933 aa24.49■■□□□ 1.51
IRF3-228ENST00000601291 FAM207AQ9NSI2 230 aaPredicted RBP24.49■■□□□ 1.51
IRF3-228ENST00000601291 AKR1B15C9JRZ8 316 aaPredicted RBP24.48■■□□□ 1.51
IRF3-228ENST00000601291 PMM2O15305 246 aa24.48■■□□□ 1.51
IRF3-228ENST00000601291 NPTXRO95502 500 aa24.48■■□□□ 1.51
IRF3-228ENST00000601291 STAG3L1P0CL83 205 aa24.48■■□□□ 1.51
IRF3-228ENST00000601291 CKBP12277 381 aa24.48■■□□□ 1.51
IRF3-228ENST00000601291 CAPN2P17655 700 aa24.48■■□□□ 1.51
IRF3-228ENST00000601291 TNNI1P19237 187 aa24.48■■□□□ 1.51
IRF3-228ENST00000601291 CASP14P31944 242 aa24.48■■□□□ 1.51
IRF3-228ENST00000601291 CLDN10P78369 228 aa24.48■■□□□ 1.51
IRF3-228ENST00000601291 FBXO47Q5MNV8 452 aa24.48■■□□□ 1.51
IRF3-228ENST00000601291 ZNF618Q5T7W0 954 aa24.48■■□□□ 1.51
IRF3-228ENST00000601291 CEP120Q8N960 986 aa24.48■■□□□ 1.51
IRF3-228ENST00000601291 USP38Q8NB14 1042 aa24.48■■□□□ 1.51
IRF3-228ENST00000601291 CGRRF1Q99675 332 aa24.48■■□□□ 1.51
IRF3-228ENST00000601291 SQORQ9Y6N5 450 aa24.48■■□□□ 1.51
IRF3-228ENST00000601291 IL18RAPO95256 599 aa24.47■■□□□ 1.51
IRF3-228ENST00000601291 GRM5P41594 1212 aa24.47■■□□□ 1.51
IRF3-228ENST00000601291 MNX1P50219 401 aaPredicted RBP24.47■■□□□ 1.51
IRF3-228ENST00000601291 BFSP2Q13515 415 aa24.47■■□□□ 1.51
IRF3-228ENST00000601291 POP1Q99575 1024 aaKnown RBP24.47■■□□□ 1.51
IRF3-228ENST00000601291 TMEM106CQ9BVX2 250 aa24.47■■□□□ 1.51
IRF3-228ENST00000601291 CCDC94Q9BW85 323 aaPredicted RBP24.47■■□□□ 1.51
IRF3-228ENST00000601291 TMEM117Q9H0C3 514 aa24.47■■□□□ 1.51
IRF3-228ENST00000601291 PRDM10Q9NQV6 1147 aa24.47■■□□□ 1.51
IRF3-228ENST00000601291 ST3GAL5Q9UNP4 418 aa24.47■■□□□ 1.51
IRF3-228ENST00000601291 A0A1W2PQJ5 194 aa24.46■■□□□ 1.51
IRF3-228ENST00000601291 MFAP3LO75121 409 aa24.46■■□□□ 1.51
IRF3-228ENST00000601291 AP3M2P53677 418 aa24.46■■□□□ 1.51
IRF3-228ENST00000601291 NFX1Q12986 1120 aaKnown RBP24.46■■□□□ 1.51
IRF3-228ENST00000601291 PAK2Q13177 524 aa24.46■■□□□ 1.51
IRF3-228ENST00000601291 ENOX2Q16206 610 aaKnown RBP24.46■■□□□ 1.51
IRF3-228ENST00000601291 SLC39A5Q6ZMH5 540 aa24.46■■□□□ 1.51
IRF3-228ENST00000601291 WDR49Q8IV35 697 aa24.46■■□□□ 1.51
IRF3-228ENST00000601291 FAM212AQ96EL1 285 aa24.46■■□□□ 1.51
IRF3-228ENST00000601291 PLCB1Q9NQ66 1216 aa24.46■■□□□ 1.51
IRF3-228ENST00000601291 CHST12Q9NRB3 414 aa24.46■■□□□ 1.51
IRF3-228ENST00000601291 TOPORSQ9NS56 1045 aaPredicted RBP24.46■■□□□ 1.51
IRF3-228ENST00000601291 CAPN11Q9UMQ6 739 aa24.46■■□□□ 1.51
IRF3-228ENST00000601291 LUC7L2Q9Y383 392 aaKnown RBP24.46■■□□□ 1.51
IRF3-228ENST00000601291 NRDCO43847 1150 aa24.46■■□□□ 1.51
IRF3-228ENST00000601291 CD4P01730 458 aa24.46■■□□□ 1.51
IRF3-228ENST00000601291 CXCL8P10145 99 aa24.46■■□□□ 1.51
IRF3-228ENST00000601291 GHRP10912 638 aa24.46■■□□□ 1.51
IRF3-228ENST00000601291 PON1P27169 355 aa24.46■■□□□ 1.51
IRF3-228ENST00000601291 LRRC8AQ8IWT6 810 aa24.46■■□□□ 1.51
IRF3-228ENST00000601291 ZNF397Q8NF99 534 aaPredicted RBP24.46■■□□□ 1.51
IRF3-228ENST00000601291 ACAP3Q96P50 834 aa24.46■■□□□ 1.51
IRF3-228ENST00000601291 TTYH3Q9C0H2 523 aa24.46■■□□□ 1.51
IRF3-228ENST00000601291 TTC26A0AVF1 554 aa24.45■■□□□ 1.5
IRF3-228ENST00000601291 PQBP1O60828 265 aaKnown RBP24.45■■□□□ 1.5
IRF3-228ENST00000601291 SLC9A1P19634 815 aa24.45■■□□□ 1.5
IRF3-228ENST00000601291 FXR1P51114 621 aaKnown RBP eCLIP24.45■■□□□ 1.5
IRF3-228ENST00000601291 ATN1P54259 1190 aaPredicted RBP24.45■■□□□ 1.5
IRF3-228ENST00000601291 ADKP55263 362 aaKnown RBP24.45■■□□□ 1.5
IRF3-228ENST00000601291 WNT7BP56706 349 aa24.45■■□□□ 1.5
IRF3-228ENST00000601291 TWF2Q6IBS0 349 aaKnown RBP24.45■■□□□ 1.5
IRF3-228ENST00000601291 TRIM65Q6PJ69 517 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms