RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 FAM189A1O60320 539 aa19.13■□□□□ 0.65
SHKBP1-224ENST00000600718 GPR32O75388 356 aa19.13■□□□□ 0.65
SHKBP1-224ENST00000600718 CCDC175P0C221 793 aa19.13■□□□□ 0.65
SHKBP1-224ENST00000600718 DLATP10515 647 aaKnown RBP19.13■□□□□ 0.65
SHKBP1-224ENST00000600718 HARSP12081 509 aaKnown RBP19.13■□□□□ 0.65
SHKBP1-224ENST00000600718 RFX1P22670 979 aa19.13■□□□□ 0.65
SHKBP1-224ENST00000600718 SLAIN1Q8ND83 568 aa19.13■□□□□ 0.65
SHKBP1-224ENST00000600718 SPAG5Q96R06 1193 aa19.13■□□□□ 0.65
SHKBP1-224ENST00000600718 NHEJ1Q9H9Q4 299 aaPredicted RBP19.13■□□□□ 0.65
SHKBP1-224ENST00000600718 DDX20Q9UHI6 824 aaKnown RBP19.13■□□□□ 0.65
SHKBP1-224ENST00000600718 TULP1O00294 542 aaPredicted RBP19.13■□□□□ 0.65
SHKBP1-224ENST00000600718 CYLC1P35663 651 aaPredicted RBP19.13■□□□□ 0.65
SHKBP1-224ENST00000600718 MAP2K1Q02750 393 aaPredicted RBP19.13■□□□□ 0.65
SHKBP1-224ENST00000600718 PCBP1Q15365 356 aaKnown RBP eCLIP19.13■□□□□ 0.65
SHKBP1-224ENST00000600718 KIZQ2M2Z5 673 aa19.13■□□□□ 0.65
SHKBP1-224ENST00000600718 ZNF568Q3ZCX4 644 aa19.13■□□□□ 0.65
SHKBP1-224ENST00000600718 ZBTB41Q5SVQ8 909 aa19.13■□□□□ 0.65
SHKBP1-224ENST00000600718 REXO1L1PQ8IX06 675 aa19.13■□□□□ 0.65
SHKBP1-224ENST00000600718 VTI1AQ96AJ9 217 aa19.13■□□□□ 0.65
SHKBP1-224ENST00000600718 APEX2Q9UBZ4 518 aa19.13■□□□□ 0.65
SHKBP1-224ENST00000600718 KAT6AQ92794 2004 aa19.12■□□□□ 0.65
SHKBP1-224ENST00000600718 UQCRHLA0A096LP55 91 aa19.12■□□□□ 0.65
SHKBP1-224ENST00000600718 GOLGA6L9A6NEM1 432 aa19.12■□□□□ 0.65
SHKBP1-224ENST00000600718 NDUFA10O95299 355 aa19.12■□□□□ 0.65
SHKBP1-224ENST00000600718 UQCRHP07919 91 aa19.12■□□□□ 0.65
SHKBP1-224ENST00000600718 ZNF200P98182 395 aaPredicted RBP19.12■□□□□ 0.65
SHKBP1-224ENST00000600718 SURF1Q15526 300 aa19.12■□□□□ 0.65
SHKBP1-224ENST00000600718 KCNA10Q16322 511 aa19.12■□□□□ 0.65
SHKBP1-224ENST00000600718 NBPF20Q3BBV1 942 aa19.12■□□□□ 0.65
SHKBP1-224ENST00000600718 EEF1DP3Q658K8 133 aa19.12■□□□□ 0.65
SHKBP1-224ENST00000600718 IQCEQ6IPM2 695 aa19.12■□□□□ 0.65
SHKBP1-224ENST00000600718 SV2AQ7L0J3 742 aa19.12■□□□□ 0.65
SHKBP1-224ENST00000600718 BRSK2Q8IWQ3 736 aa19.12■□□□□ 0.65
SHKBP1-224ENST00000600718 PCSK9Q8NBP7 692 aaKnown RBP19.12■□□□□ 0.65
SHKBP1-224ENST00000600718 DNAJB3Q8WWF6 145 aa19.12■□□□□ 0.65
SHKBP1-224ENST00000600718 STK33Q9BYT3 514 aa19.12■□□□□ 0.65
SHKBP1-224ENST00000600718 PDE11AQ9HCR9 933 aa19.12■□□□□ 0.65
SHKBP1-224ENST00000600718 DNAJC12Q9UKB3 198 aa19.12■□□□□ 0.65
SHKBP1-224ENST00000600718 CPSF3Q9UKF6 684 aaKnown RBP19.12■□□□□ 0.65
SHKBP1-224ENST00000600718 CSDE1O75534 798 aaKnown RBP19.12■□□□□ 0.65
SHKBP1-224ENST00000600718 ERLIN2O94905 339 aa19.12■□□□□ 0.65
SHKBP1-224ENST00000600718 SERPING1P05155 500 aa19.12■□□□□ 0.65
SHKBP1-224ENST00000600718 ASGR1P07306 291 aa19.12■□□□□ 0.65
SHKBP1-224ENST00000600718 MCF2P10911 925 aa19.12■□□□□ 0.65
SHKBP1-224ENST00000600718 TNNI1P19237 187 aa19.12■□□□□ 0.65
SHKBP1-224ENST00000600718 JAM2P57087 298 aa19.12■□□□□ 0.65
SHKBP1-224ENST00000600718 RAPGEF1Q13905 1077 aa19.12■□□□□ 0.65
SHKBP1-224ENST00000600718 SLC9C1Q4G0N8 1177 aa19.12■□□□□ 0.65
SHKBP1-224ENST00000600718 CCSAPQ6IQ19 270 aaPredicted RBP19.12■□□□□ 0.65
SHKBP1-224ENST00000600718 TAF2Q6P1X5 1199 aa19.12■□□□□ 0.65
SHKBP1-224ENST00000600718 FBXL13Q8NEE6 735 aa19.12■□□□□ 0.65
SHKBP1-224ENST00000600718 ZNF516Q92618 1163 aa19.12■□□□□ 0.65
SHKBP1-224ENST00000600718 CCDC42Q96M95 316 aa19.12■□□□□ 0.65
SHKBP1-224ENST00000600718 DESI2Q9BSY9 194 aa19.12■□□□□ 0.65
SHKBP1-224ENST00000600718 CDT1Q9H211 546 aa19.12■□□□□ 0.65
SHKBP1-224ENST00000600718 TOPORSQ9NS56 1045 aaPredicted RBP19.12■□□□□ 0.65
SHKBP1-224ENST00000600718 ARHGAP20Q9P2F6 1191 aa19.12■□□□□ 0.65
SHKBP1-224ENST00000600718 GTF2IRD1Q9UHL9 959 aa19.12■□□□□ 0.65
SHKBP1-224ENST00000600718 ARF4P18085 180 aaPredicted RBP19.11■□□□□ 0.65
SHKBP1-224ENST00000600718 AP3M2P53677 418 aa19.11■□□□□ 0.65
SHKBP1-224ENST00000600718 POU5F1Q01860 360 aaKnown RBP19.11■□□□□ 0.65
SHKBP1-224ENST00000600718 ASIC2Q16515 512 aa19.11■□□□□ 0.65
SHKBP1-224ENST00000600718 KYAT1Q16773 422 aa19.11■□□□□ 0.65
SHKBP1-224ENST00000600718 C15orf39Q6ZRI6 1047 aa19.11■□□□□ 0.65
SHKBP1-224ENST00000600718 FMNL3Q8IVF7 1028 aa19.11■□□□□ 0.65
SHKBP1-224ENST00000600718 CGRRF1Q99675 332 aa19.11■□□□□ 0.65
SHKBP1-224ENST00000600718 RAB20Q9NX57 234 aa19.11■□□□□ 0.65
SHKBP1-224ENST00000600718 SSU72P8A0A1W2PR75 194 aa19.1■□□□□ 0.65
SHKBP1-224ENST00000600718 TSPAN1O60635 241 aa19.1■□□□□ 0.65
SHKBP1-224ENST00000600718 TNFSF9P41273 254 aa19.1■□□□□ 0.65
SHKBP1-224ENST00000600718 NCBP1Q09161 790 aaKnown RBP19.1■□□□□ 0.65
SHKBP1-224ENST00000600718 TMEM62Q0P6H9 643 aa19.1■□□□□ 0.65
SHKBP1-224ENST00000600718 MAPK8IP2Q13387 824 aaPredicted RBP19.1■□□□□ 0.65
SHKBP1-224ENST00000600718 PTPN14Q15678 1187 aa19.1■□□□□ 0.65
SHKBP1-224ENST00000600718 SEZ6Q53EL9 994 aa19.1■□□□□ 0.65
SHKBP1-224ENST00000600718 HGSNATQ68CP4 663 aa19.1■□□□□ 0.65
SHKBP1-224ENST00000600718 PHLDB3Q6NSJ2 640 aa19.1■□□□□ 0.65
SHKBP1-224ENST00000600718 GJB7Q6PEY0 223 aa19.1■□□□□ 0.65
SHKBP1-224ENST00000600718 RNF180Q86T96 592 aa19.1■□□□□ 0.65
SHKBP1-224ENST00000600718 PDZD7Q9H5P4 517 aa19.1■□□□□ 0.65
SHKBP1-224ENST00000600718 BZW2Q9Y6E2 419 aaKnown RBP19.1■□□□□ 0.65
SHKBP1-224ENST00000600718 A0A1B0GUA9 196 aa19.1■□□□□ 0.65
SHKBP1-224ENST00000600718 EIF3CLB5ME19 914 aaKnown RBP19.1■□□□□ 0.65
SHKBP1-224ENST00000600718 C4BPAP04003 597 aaKnown RBP19.1■□□□□ 0.65
SHKBP1-224ENST00000600718 INHAP05111 366 aa19.1■□□□□ 0.65
SHKBP1-224ENST00000600718 DARSP14868 501 aaKnown RBP19.1■□□□□ 0.65
SHKBP1-224ENST00000600718 STAT1P42224 750 aa19.1■□□□□ 0.65
SHKBP1-224ENST00000600718 WNT7BP56706 349 aa19.1■□□□□ 0.65
SHKBP1-224ENST00000600718 KRT83P78385 493 aa19.1■□□□□ 0.65
SHKBP1-224ENST00000600718 ZACNQ401N2 412 aa19.1■□□□□ 0.65
SHKBP1-224ENST00000600718 DNTTIP2Q5QJE6 756 aaKnown RBP19.1■□□□□ 0.65
SHKBP1-224ENST00000600718 NYAP1Q6ZVC0 841 aa19.1■□□□□ 0.65
SHKBP1-224ENST00000600718 SESTD1Q86VW0 696 aa19.1■□□□□ 0.65
SHKBP1-224ENST00000600718 THNSL1Q8IYQ7 743 aa19.1■□□□□ 0.65
SHKBP1-224ENST00000600718 SEMA4DQ92854 862 aa19.1■□□□□ 0.65
SHKBP1-224ENST00000600718 EIF3CQ99613 913 aaKnown RBP19.1■□□□□ 0.65
SHKBP1-224ENST00000600718 CDHR5Q9HBB8 845 aa19.1■□□□□ 0.65
SHKBP1-224ENST00000600718 AJAP1Q9UKB5 411 aaPredicted RBP19.1■□□□□ 0.65
SHKBP1-224ENST00000600718 CABYRO75952 493 aa19.09■□□□□ 0.65
SHKBP1-224ENST00000600718 TUBB4AP04350 444 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms