RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 LOXL4Q96JB6 756 aa19.74■□□□□ 0.75
SSBP4-207ENST00000600244 NLRP4Q96MN2 994 aa19.74■□□□□ 0.75
SSBP4-207ENST00000600244 ADAM33Q9BZ11 813 aa19.74■□□□□ 0.75
SSBP4-207ENST00000600244 TRPV5Q9NQA5 729 aa19.74■□□□□ 0.75
SSBP4-207ENST00000600244 ADAM28Q9UKQ2 775 aa19.74■□□□□ 0.75
SSBP4-207ENST00000600244 CCDC69A6NI79 296 aa19.73■□□□□ 0.75
SSBP4-207ENST00000600244 SH2B2O14492 632 aaPredicted RBP19.73■□□□□ 0.75
SSBP4-207ENST00000600244 MAFO75444 373 aaPredicted RBP19.73■□□□□ 0.75
SSBP4-207ENST00000600244 SPINK2P20155 84 aa19.73■□□□□ 0.75
SSBP4-207ENST00000600244 FCARP24071 287 aa19.73■□□□□ 0.75
SSBP4-207ENST00000600244 MLH1P40692 756 aa19.73■□□□□ 0.75
SSBP4-207ENST00000600244 SCNN1GP51170 649 aa19.73■□□□□ 0.75
SSBP4-207ENST00000600244 PLA2G2CQ5R387 149 aa19.73■□□□□ 0.75
SSBP4-207ENST00000600244 JAKMIP3Q5VZ66 844 aa19.73■□□□□ 0.75
SSBP4-207ENST00000600244 CEP68Q76N32 757 aa19.73■□□□□ 0.75
SSBP4-207ENST00000600244 RAB11FIP4Q86YS3 637 aa19.73■□□□□ 0.75
SSBP4-207ENST00000600244 LENG9Q96B70 501 aa19.73■□□□□ 0.75
SSBP4-207ENST00000600244 ZFP42Q96MM3 310 aa19.73■□□□□ 0.75
SSBP4-207ENST00000600244 GLT8D2Q9H1C3 349 aa19.73■□□□□ 0.75
SSBP4-207ENST00000600244 MINDY3Q9H8M7 445 aa19.73■□□□□ 0.75
SSBP4-207ENST00000600244 MRPS23Q9Y3D9 190 aaKnown RBP19.73■□□□□ 0.75
SSBP4-207ENST00000600244 IPPQ9Y573 584 aa19.73■□□□□ 0.75
SSBP4-207ENST00000600244 NBEAQ8NFP9 2946 aa19.73■□□□□ 0.75
SSBP4-207ENST00000600244 TMEM150BA6NC51 233 aa19.72■□□□□ 0.75
SSBP4-207ENST00000600244 GIPC1O14908 333 aa19.72■□□□□ 0.75
SSBP4-207ENST00000600244 COL4A2P08572 1712 aa19.72■□□□□ 0.75
SSBP4-207ENST00000600244 HOXA6P31267 233 aa19.72■□□□□ 0.75
SSBP4-207ENST00000600244 LIFRP42702 1097 aa19.72■□□□□ 0.75
SSBP4-207ENST00000600244 UVSSAQ2YD98 709 aa19.72■□□□□ 0.75
SSBP4-207ENST00000600244 XKR3Q5GH77 459 aa19.72■□□□□ 0.75
SSBP4-207ENST00000600244 HEATR6Q6AI08 1181 aaKnown RBP19.72■□□□□ 0.75
SSBP4-207ENST00000600244 CASC1Q6TDU7 716 aa19.72■□□□□ 0.75
SSBP4-207ENST00000600244 MAP4K3Q8IVH8 894 aa19.72■□□□□ 0.75
SSBP4-207ENST00000600244 GSTCDQ8NEC7 633 aa19.72■□□□□ 0.75
SSBP4-207ENST00000600244 LNX1Q8TBB1 728 aaPredicted RBP19.72■□□□□ 0.75
SSBP4-207ENST00000600244 PIK3R5Q8WYR1 880 aa19.72■□□□□ 0.75
SSBP4-207ENST00000600244 SH2D3AQ9BRG2 576 aa19.72■□□□□ 0.75
SSBP4-207ENST00000600244 BRD9Q9H8M2 597 aa19.72■□□□□ 0.75
SSBP4-207ENST00000600244 CNTNAP5Q8WYK1 1306 aa19.72■□□□□ 0.75
SSBP4-207ENST00000600244 AKAP13Q12802 2813 aa19.71■□□□□ 0.75
SSBP4-207ENST00000600244 ADAM12O43184 909 aa19.71■□□□□ 0.75
SSBP4-207ENST00000600244 PRC1O43663 620 aa19.71■□□□□ 0.75
SSBP4-207ENST00000600244 EPN2O95208 641 aa19.71■□□□□ 0.75
SSBP4-207ENST00000600244 TOP3BO95985 862 aaKnown RBP19.71■□□□□ 0.75
SSBP4-207ENST00000600244 CIITAP33076 1130 aa19.71■□□□□ 0.75
SSBP4-207ENST00000600244 RAP1GAPP47736 663 aa19.71■□□□□ 0.75
SSBP4-207ENST00000600244 FUT2Q10981 343 aa19.71■□□□□ 0.75
SSBP4-207ENST00000600244 FOXC1Q12948 553 aa19.71■□□□□ 0.75
SSBP4-207ENST00000600244 PTGDRQ13258 359 aa19.71■□□□□ 0.75
SSBP4-207ENST00000600244 SLC5A9Q2M3M2 681 aa19.71■□□□□ 0.75
SSBP4-207ENST00000600244 PRR16Q569H4 304 aa19.71■□□□□ 0.75
SSBP4-207ENST00000600244 SRGAP1Q7Z6B7 1085 aa19.71■□□□□ 0.75
SSBP4-207ENST00000600244 SLC7A14Q8TBB6 771 aa19.71■□□□□ 0.75
SSBP4-207ENST00000600244 TMEM87BQ96K49 555 aa19.71■□□□□ 0.75
SSBP4-207ENST00000600244 ZNF334Q9HCZ1 680 aaPredicted RBP19.71■□□□□ 0.75
SSBP4-207ENST00000600244 AVENQ9NQS1 362 aaPredicted RBP19.71■□□□□ 0.75
SSBP4-207ENST00000600244 BARHL2Q9NY43 387 aa19.71■□□□□ 0.75
SSBP4-207ENST00000600244 SEPT9Q9UHD8 586 aaPredicted RBP19.71■□□□□ 0.75
SSBP4-207ENST00000600244 DMXL2Q8TDJ6 3036 aa19.71■□□□□ 0.75
SSBP4-207ENST00000600244 NOVA1P51513 510 aaKnown RBP19.7■□□□□ 0.74
SSBP4-207ENST00000600244 GRM2Q14416 872 aa19.7■□□□□ 0.74
SSBP4-207ENST00000600244 BMP2KLQ5H9B9 411 aa19.7■□□□□ 0.74
SSBP4-207ENST00000600244 AXDND1Q5T1B0 1012 aaPredicted RBP19.7■□□□□ 0.74
SSBP4-207ENST00000600244 WDR5BQ86VZ2 330 aa19.7■□□□□ 0.74
SSBP4-207ENST00000600244 RABGGTAQ92696 567 aa19.7■□□□□ 0.74
SSBP4-207ENST00000600244 IRF7Q92985 503 aa19.7■□□□□ 0.74
SSBP4-207ENST00000600244 TRMT61BQ9BVS5 477 aaKnown RBP19.7■□□□□ 0.74
SSBP4-207ENST00000600244 EIF2AQ9BY44 585 aaKnown RBP19.7■□□□□ 0.74
SSBP4-207ENST00000600244 PIAS3Q9Y6X2 628 aa19.7■□□□□ 0.74
SSBP4-207ENST00000600244 hCG_1984214I3L0E3 225 aa19.69■□□□□ 0.74
SSBP4-207ENST00000600244 NRG2O14511 850 aaPredicted RBP19.69■□□□□ 0.74
SSBP4-207ENST00000600244 ADAMTS3O15072 1205 aa19.69■□□□□ 0.74
SSBP4-207ENST00000600244 TADA2AO75478 443 aa19.69■□□□□ 0.74
SSBP4-207ENST00000600244 HOXC13P31276 330 aa19.69■□□□□ 0.74
SSBP4-207ENST00000600244 SFNP31947 248 aa19.69■□□□□ 0.74
SSBP4-207ENST00000600244 RTL10Q7L3V2 364 aa19.69■□□□□ 0.74
SSBP4-207ENST00000600244 ZNF713Q8N859 430 aaPredicted RBP19.69■□□□□ 0.74
SSBP4-207ENST00000600244 ZCCHC14Q8WYQ9 949 aaKnown RBP19.69■□□□□ 0.74
SSBP4-207ENST00000600244 TTPALQ9BTX7 342 aa19.69■□□□□ 0.74
SSBP4-207ENST00000600244 C2orf42Q9NWW7 574 aa19.69■□□□□ 0.74
SSBP4-207ENST00000600244 GIT1Q9Y2X7 761 aa19.69■□□□□ 0.74
SSBP4-207ENST00000600244 HES2Q9Y543 173 aa19.69■□□□□ 0.74
SSBP4-207ENST00000600244 SLC12A7Q9Y666 1083 aa19.69■□□□□ 0.74
SSBP4-207ENST00000600244 TDRD15B5MCY1 1934 aaKnown RBP19.68■□□□□ 0.74
SSBP4-207ENST00000600244 RHOP08100 348 aa19.68■□□□□ 0.74
SSBP4-207ENST00000600244 JAK3P52333 1124 aa19.68■□□□□ 0.74
SSBP4-207ENST00000600244 MLLT6P55198 1093 aaPredicted RBP19.68■□□□□ 0.74
SSBP4-207ENST00000600244 ZNF252P-AS1Q0IIN9 211 aa19.68■□□□□ 0.74
SSBP4-207ENST00000600244 RAB33AQ14088 237 aa19.68■□□□□ 0.74
SSBP4-207ENST00000600244 PSMD5Q16401 504 aa19.68■□□□□ 0.74
SSBP4-207ENST00000600244 RIT2Q99578 217 aa19.68■□□□□ 0.74
SSBP4-207ENST00000600244 UNC45AQ9H3U1 944 aa19.68■□□□□ 0.74
SSBP4-207ENST00000600244 ZFP14Q9HCL3 533 aa19.68■□□□□ 0.74
SSBP4-207ENST00000600244 ASH1LQ9NR48 2969 aaKnown RBP19.68■□□□□ 0.74
SSBP4-207ENST00000600244 COL4A3BPQ9Y5P4 624 aa19.68■□□□□ 0.74
SSBP4-207ENST00000600244 V9GY48 417 aaPredicted RBP19.68■□□□□ 0.74
SSBP4-207ENST00000600244 SF3B1O75533 1304 aaKnown RBP eCLIP19.68■□□□□ 0.74
SSBP4-207ENST00000600244 SPAG17Q6Q759 2223 aa19.68■□□□□ 0.74
SSBP4-207ENST00000600244 MSH4O15457 936 aa19.67■□□□□ 0.74
SSBP4-207ENST00000600244 EDIL3O43854 480 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms