RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 TCHPQ9BT92 498 aa15.03■□□□□ -0
VRK3-219ENST00000600137 APOL6Q9BWW8 343 aa15.03■□□□□ -0
VRK3-219ENST00000600137 TRIM6Q9C030 488 aaPredicted RBP15.03■□□□□ -0
VRK3-219ENST00000600137 NRDE2Q9H7Z3 1164 aa15.03■□□□□ -0
VRK3-219ENST00000600137 UBN1Q9NPG3 1134 aa15.03■□□□□ -0
VRK3-219ENST00000600137 EXOC1Q9NV70 894 aa15.03■□□□□ -0
VRK3-219ENST00000600137 GDAQ9Y2T3 454 aa15.03■□□□□ -0
VRK3-219ENST00000600137 CITO14578 2027 aa15.03■□□□□ -0
VRK3-219ENST00000600137 RALGAPA2Q2PPJ7 1873 aa15.03■□□□□ -0
VRK3-219ENST00000600137 TDRD15B5MCY1 1934 aaKnown RBP15.02■□□□□ -0
VRK3-219ENST00000600137 C5orf67F2Z3F1 127 aa15.02■□□□□ -0
VRK3-219ENST00000600137 LPXNO60711 386 aa15.02■□□□□ -0
VRK3-219ENST00000600137 BMPR1AP36894 532 aa15.02■□□□□ -0
VRK3-219ENST00000600137 MLH1P40692 756 aa15.02■□□□□ -0
VRK3-219ENST00000600137 TNFSF9P41273 254 aa15.02■□□□□ -0
VRK3-219ENST00000600137 DSC1Q08554 894 aa15.02■□□□□ -0
VRK3-219ENST00000600137 GLB1LQ6UWU2 654 aa15.02■□□□□ -0
VRK3-219ENST00000600137 BICD1Q96G01 975 aa15.02■□□□□ -0
VRK3-219ENST00000600137 ZMAT2Q96NC0 199 aaKnown RBP15.02■□□□□ -0
VRK3-219ENST00000600137 TGS1Q96RS0 853 aaKnown RBP15.02■□□□□ -0
VRK3-219ENST00000600137 CBWD1Q9BRT8 395 aa15.02■□□□□ -0
VRK3-219ENST00000600137 KCTD10Q9H3F6 313 aa15.02■□□□□ -0
VRK3-219ENST00000600137 TMEM206Q9H813 350 aa15.02■□□□□ -0
VRK3-219ENST00000600137 CERS4Q9HA82 394 aa15.02■□□□□ -0
VRK3-219ENST00000600137 ANKFY1Q9P2R3 1169 aa15.02■□□□□ -0
VRK3-219ENST00000600137 PARP2Q9UGN5 583 aa15.02■□□□□ -0
VRK3-219ENST00000600137 CPSF3Q9UKF6 684 aaKnown RBP15.02■□□□□ -0
VRK3-219ENST00000600137 ANK1P16157 1881 aa15.01□□□□□ -0.01
VRK3-219ENST00000600137 UBE4BO95155 1302 aa15.01□□□□□ -0.01
VRK3-219ENST00000600137 RFXAPO00287 272 aa15.01□□□□□ -0.01
VRK3-219ENST00000600137 OGTO15294 1046 aa15.01□□□□□ -0.01
VRK3-219ENST00000600137 POMCP01189 267 aa15.01□□□□□ -0.01
VRK3-219ENST00000600137 HARSP12081 509 aaKnown RBP15.01□□□□□ -0.01
VRK3-219ENST00000600137 GARTP22102 1010 aa15.01□□□□□ -0.01
VRK3-219ENST00000600137 MCM4P33991 863 aa15.01□□□□□ -0.01
VRK3-219ENST00000600137 SCNN1GP51170 649 aa15.01□□□□□ -0.01
VRK3-219ENST00000600137 OSTNP61366 133 aa15.01□□□□□ -0.01
VRK3-219ENST00000600137 KNOP1Q1ED39 458 aaKnown RBP15.01□□□□□ -0.01
VRK3-219ENST00000600137 EPC2Q52LR7 807 aa15.01□□□□□ -0.01
VRK3-219ENST00000600137 NELFCDQ8IXH7 590 aa15.01□□□□□ -0.01
VRK3-219ENST00000600137 RSPH1Q8WYR4 309 aa15.01□□□□□ -0.01
VRK3-219ENST00000600137 GBP3Q9H0R5 595 aa15.01□□□□□ -0.01
VRK3-219ENST00000600137 MTMR10Q9NXD2 777 aa15.01□□□□□ -0.01
VRK3-219ENST00000600137 DNAJB4Q9UDY4 337 aa15.01□□□□□ -0.01
VRK3-219ENST00000600137 MAN1B1Q9UKM7 699 aa15.01□□□□□ -0.01
VRK3-219ENST00000600137 EXOC7Q9UPT5 735 aa15.01□□□□□ -0.01
VRK3-219ENST00000600137 INPP5FQ9Y2H2 1132 aa15.01□□□□□ -0.01
VRK3-219ENST00000600137 REV3LO60673 3130 aa15□□□□□ -0.01
VRK3-219ENST00000600137 MYO7AQ13402 2215 aa15□□□□□ -0.01
VRK3-219ENST00000600137 PDCD11Q14690 1871 aaKnown RBP15□□□□□ -0.01
VRK3-219ENST00000600137 TTC26A0AVF1 554 aa15□□□□□ -0.01
VRK3-219ENST00000600137 CLTAP09496 248 aa15□□□□□ -0.01
VRK3-219ENST00000600137 WNT7BP56706 349 aa15□□□□□ -0.01
VRK3-219ENST00000600137 ENOX2Q16206 610 aaKnown RBP15□□□□□ -0.01
VRK3-219ENST00000600137 CAMK4Q16566 473 aa15□□□□□ -0.01
VRK3-219ENST00000600137 COBLL1Q53SF7 1204 aa15□□□□□ -0.01
VRK3-219ENST00000600137 ZNF697Q5TEC3 545 aa15□□□□□ -0.01
VRK3-219ENST00000600137 SLFN12LQ6IEE8 588 aa15□□□□□ -0.01
VRK3-219ENST00000600137 STXBP4Q6ZWJ1 553 aa15□□□□□ -0.01
VRK3-219ENST00000600137 COLGALT2Q8IYK4 626 aa15□□□□□ -0.01
VRK3-219ENST00000600137 SMYD4Q8IYR2 804 aaPredicted RBP15□□□□□ -0.01
VRK3-219ENST00000600137 ABI1Q8IZP0 508 aa15□□□□□ -0.01
VRK3-219ENST00000600137 LRRC43Q8N309 656 aa15□□□□□ -0.01
VRK3-219ENST00000600137 TMEM174Q8WUU8 243 aa15□□□□□ -0.01
VRK3-219ENST00000600137 CCDC34Q96HJ3 373 aa15□□□□□ -0.01
VRK3-219ENST00000600137 SNX27Q96L92 541 aa15□□□□□ -0.01
VRK3-219ENST00000600137 GUCD1Q96NT3 240 aa15□□□□□ -0.01
VRK3-219ENST00000600137 ACAP3Q96P50 834 aa15□□□□□ -0.01
VRK3-219ENST00000600137 PPP1R10Q96QC0 940 aaKnown RBP15□□□□□ -0.01
VRK3-219ENST00000600137 MSTO1Q9BUK6 570 aa15□□□□□ -0.01
VRK3-219ENST00000600137 CCDC94Q9BW85 323 aaPredicted RBP15□□□□□ -0.01
VRK3-219ENST00000600137 CLSTN2Q9H4D0 955 aa15□□□□□ -0.01
VRK3-219ENST00000600137 AGPAT3Q9NRZ7 376 aa15□□□□□ -0.01
VRK3-219ENST00000600137 DMAC2Q9NW81 257 aa15□□□□□ -0.01
VRK3-219ENST00000600137 KANSL3Q9P2N6 904 aa15□□□□□ -0.01
VRK3-219ENST00000600137 AGO2Q9UKV8 859 aaKnown RBP15□□□□□ -0.01
VRK3-219ENST00000600137 SMIM28A0A1B0GU29 152 aa14.99□□□□□ -0.01
VRK3-219ENST00000600137 EFEMP2O95967 443 aa14.99□□□□□ -0.01
VRK3-219ENST00000600137 RB1P06400 928 aa14.99□□□□□ -0.01
VRK3-219ENST00000600137 GALTP07902 379 aa14.99□□□□□ -0.01
VRK3-219ENST00000600137 CXCL8P10145 99 aa14.99□□□□□ -0.01
VRK3-219ENST00000600137 KCNE1P15382 129 aa14.99□□□□□ -0.01
VRK3-219ENST00000600137 CD44P16070 742 aaKnown RBP14.99□□□□□ -0.01
VRK3-219ENST00000600137 IGFBP6P24592 240 aaPredicted RBP14.99□□□□□ -0.01
VRK3-219ENST00000600137 PBX3P40426 434 aa14.99□□□□□ -0.01
VRK3-219ENST00000600137 PRCPP42785 496 aa14.99□□□□□ -0.01
VRK3-219ENST00000600137 ACOT2P49753 483 aa14.99□□□□□ -0.01
VRK3-219ENST00000600137 CAMK1Q14012 370 aa14.99□□□□□ -0.01
VRK3-219ENST00000600137 MORC3Q14149 939 aa14.99□□□□□ -0.01
VRK3-219ENST00000600137 ADGRE1Q14246 886 aa14.99□□□□□ -0.01
VRK3-219ENST00000600137 ZBTB6Q15916 424 aa14.99□□□□□ -0.01
VRK3-219ENST00000600137 ZNF658Q5TYW1 1059 aaPredicted RBP14.99□□□□□ -0.01
VRK3-219ENST00000600137 KCNT2Q6UVM3 1135 aa14.99□□□□□ -0.01
VRK3-219ENST00000600137 APBB1IPQ7Z5R6 666 aaPredicted RBP14.99□□□□□ -0.01
VRK3-219ENST00000600137 TMEM173Q86WV6 379 aaPredicted RBP14.99□□□□□ -0.01
VRK3-219ENST00000600137 C12orf56Q8IXR9 622 aa14.99□□□□□ -0.01
VRK3-219ENST00000600137 HACE1Q8IYU2 909 aa14.99□□□□□ -0.01
VRK3-219ENST00000600137 SYCP3Q8IZU3 236 aa14.99□□□□□ -0.01
VRK3-219ENST00000600137 GUF1Q8N442 669 aaKnown RBP14.99□□□□□ -0.01
VRK3-219ENST00000600137 COLGALT1Q8NBJ5 622 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms