RNA–Protein interactions for RNA: ENST00000600006.5

CHMP2A-205, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-205ENST00000600006 PTPN14Q15678 1187 aa8.76□□□□□ -1.01
CHMP2A-205ENST00000600006 NAB2Q15742 525 aa8.76□□□□□ -1.01
CHMP2A-205ENST00000600006 SPECC1Q5M775 1068 aa8.76□□□□□ -1.01
CHMP2A-205ENST00000600006 ZPBP2Q6X784 338 aa8.76□□□□□ -1.01
CHMP2A-205ENST00000600006 TMEM184AQ6ZMB5 413 aa8.76□□□□□ -1.01
CHMP2A-205ENST00000600006 EP400NLQ6ZTU2 488 aa8.76□□□□□ -1.01
CHMP2A-205ENST00000600006 VPS52Q8N1B4 723 aa8.76□□□□□ -1.01
CHMP2A-205ENST00000600006 CEP120Q8N960 986 aa8.76□□□□□ -1.01
CHMP2A-205ENST00000600006 MRPL43Q8N983 215 aaKnown RBP8.76□□□□□ -1.01
CHMP2A-205ENST00000600006 SPRYD3Q8NCJ5 442 aa8.76□□□□□ -1.01
CHMP2A-205ENST00000600006 SMRP1Q8NCR6 262 aa8.76□□□□□ -1.01
CHMP2A-205ENST00000600006 ZNF396Q96N95 335 aaPredicted RBP8.76□□□□□ -1.01
CHMP2A-205ENST00000600006 CLIC6Q96NY7 704 aa8.76□□□□□ -1.01
CHMP2A-205ENST00000600006 TARS2Q9BW92 718 aaKnown RBP8.76□□□□□ -1.01
CHMP2A-205ENST00000600006 PARVGQ9HBI0 331 aa8.76□□□□□ -1.01
CHMP2A-205ENST00000600006 SNTG2Q9NY99 539 aa8.76□□□□□ -1.01
CHMP2A-205ENST00000600006 KLK14Q9P0G3 267 aa8.76□□□□□ -1.01
CHMP2A-205ENST00000600006 CCDC39Q9UFE4 941 aa8.76□□□□□ -1.01
CHMP2A-205ENST00000600006 CD207Q9UJ71 328 aa8.76□□□□□ -1.01
CHMP2A-205ENST00000600006 BARX2Q9UMQ3 279 aaPredicted RBP8.76□□□□□ -1.01
CHMP2A-205ENST00000600006 FAM50BQ9Y247 325 aa8.76□□□□□ -1.01
CHMP2A-205ENST00000600006 PRG3Q9Y2Y8 225 aaPredicted RBP8.76□□□□□ -1.01
CHMP2A-205ENST00000600006 ATP6V1DQ9Y5K8 247 aa8.76□□□□□ -1.01
CHMP2A-205ENST00000600006 VWA8A3KMH1 1905 aa8.76□□□□□ -1.01
CHMP2A-205ENST00000600006 ANK1P16157 1881 aa8.75□□□□□ -1.01
CHMP2A-205ENST00000600006 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.75□□□□□ -1.01
CHMP2A-205ENST00000600006 SPTLC2O15270 562 aa8.75□□□□□ -1.01
CHMP2A-205ENST00000600006 CLASP2O75122 1294 aaKnown RBP8.75□□□□□ -1.01
CHMP2A-205ENST00000600006 TBCAO75347 108 aaKnown RBP8.75□□□□□ -1.01
CHMP2A-205ENST00000600006 NR1I2O75469 434 aa8.75□□□□□ -1.01
CHMP2A-205ENST00000600006 TOM1L1O75674 476 aa8.75□□□□□ -1.01
CHMP2A-205ENST00000600006 FAM13AO94988 1023 aa8.75□□□□□ -1.01
CHMP2A-205ENST00000600006 PIGRP01833 764 aa8.75□□□□□ -1.01
CHMP2A-205ENST00000600006 SOD2P04179 222 aa8.75□□□□□ -1.01
CHMP2A-205ENST00000600006 SRGAP2BP0DMP2 458 aa8.75□□□□□ -1.01
CHMP2A-205ENST00000600006 MCF2P10911 925 aa8.75□□□□□ -1.01
CHMP2A-205ENST00000600006 DDIT3P35638 169 aa8.75□□□□□ -1.01
CHMP2A-205ENST00000600006 OR1G1P47890 313 aa8.75□□□□□ -1.01
CHMP2A-205ENST00000600006 RBM10P98175 930 aaKnown RBP8.75□□□□□ -1.01
CHMP2A-205ENST00000600006 STRN3Q13033 797 aa8.75□□□□□ -1.01
CHMP2A-205ENST00000600006 TUSC3Q13454 348 aa8.75□□□□□ -1.01
CHMP2A-205ENST00000600006 DHX8Q14562 1220 aaKnown RBP8.75□□□□□ -1.01
CHMP2A-205ENST00000600006 BMS1Q14692 1282 aaKnown RBP8.75□□□□□ -1.01
CHMP2A-205ENST00000600006 SMAD2Q15796 467 aaKnown RBP8.75□□□□□ -1.01
CHMP2A-205ENST00000600006 CLUL1Q15846 466 aa8.75□□□□□ -1.01
CHMP2A-205ENST00000600006 XKR4Q5GH76 650 aa8.75□□□□□ -1.01
CHMP2A-205ENST00000600006 RRAGBQ5VZM2 374 aa8.75□□□□□ -1.01
CHMP2A-205ENST00000600006 ATL3Q6DD88 541 aa8.75□□□□□ -1.01
CHMP2A-205ENST00000600006 MPZL3Q6UWV2 235 aa8.75□□□□□ -1.01
CHMP2A-205ENST00000600006 HAUS6Q7Z4H7 955 aa8.75□□□□□ -1.01
CHMP2A-205ENST00000600006 FAM178BQ8IXR5 827 aa8.75□□□□□ -1.01
CHMP2A-205ENST00000600006 AUTS2Q8WXX7 1259 aa8.75□□□□□ -1.01
CHMP2A-205ENST00000600006 IPO9Q96P70 1041 aaKnown RBP8.75□□□□□ -1.01
CHMP2A-205ENST00000600006 FIZ1Q96SL8 496 aa8.75□□□□□ -1.01
CHMP2A-205ENST00000600006 CCDC94Q9BW85 323 aaPredicted RBP8.75□□□□□ -1.01
CHMP2A-205ENST00000600006 COLEC11Q9BWP8 271 aa8.75□□□□□ -1.01
CHMP2A-205ENST00000600006 CXCL16Q9H2A7 254 aa8.75□□□□□ -1.01
CHMP2A-205ENST00000600006 PRKAG3Q9UGI9 489 aa8.75□□□□□ -1.01
CHMP2A-205ENST00000600006 GDAQ9Y2T3 454 aa8.75□□□□□ -1.01
CHMP2A-205ENST00000600006 HCFC2Q9Y5Z7 792 aa8.75□□□□□ -1.01
CHMP2A-205ENST00000600006 XIRP2A4UGR9 3374 aa8.74□□□□□ -1.01
CHMP2A-205ENST00000600006 A0A087X0B3 334 aa8.74□□□□□ -1.01
CHMP2A-205ENST00000600006 F8W810 466 aa8.74□□□□□ -1.01
CHMP2A-205ENST00000600006 K7ENM7 598 aa8.74□□□□□ -1.01
CHMP2A-205ENST00000600006 TRAK2O60296 914 aa8.74□□□□□ -1.01
CHMP2A-205ENST00000600006 LILRB3O75022 631 aa8.74□□□□□ -1.01
CHMP2A-205ENST00000600006 CXCL14O95715 111 aa8.74□□□□□ -1.01
CHMP2A-205ENST00000600006 KRT18P05783 430 aaKnown RBP8.74□□□□□ -1.01
CHMP2A-205ENST00000600006 URODP06132 367 aa8.74□□□□□ -1.01
CHMP2A-205ENST00000600006 THP07101 528 aa8.74□□□□□ -1.01
CHMP2A-205ENST00000600006 ABCD1P33897 745 aa8.74□□□□□ -1.01
CHMP2A-205ENST00000600006 STAT6P42226 847 aa8.74□□□□□ -1.01
CHMP2A-205ENST00000600006 GLUD2P49448 558 aa8.74□□□□□ -1.01
CHMP2A-205ENST00000600006 MCL1Q07820 350 aa8.74□□□□□ -1.01
CHMP2A-205ENST00000600006 HSP90AA2PQ14568 343 aaPredicted RBP8.74□□□□□ -1.01
CHMP2A-205ENST00000600006 NOLC1Q14978 699 aaKnown RBP eCLIP8.74□□□□□ -1.01
CHMP2A-205ENST00000600006 FOXD4L5Q5VV16 416 aaPredicted RBP8.74□□□□□ -1.01
CHMP2A-205ENST00000600006 ANKRD54Q6NXT1 300 aa8.74□□□□□ -1.01
CHMP2A-205ENST00000600006 FUT10Q6P4F1 479 aa8.74□□□□□ -1.01
CHMP2A-205ENST00000600006 CCDC73Q6ZRK6 1079 aa8.74□□□□□ -1.01
CHMP2A-205ENST00000600006 GPR65Q8IYL9 337 aa8.74□□□□□ -1.01
CHMP2A-205ENST00000600006 MYCT1Q8N699 235 aa8.74□□□□□ -1.01
CHMP2A-205ENST00000600006 FOXD4L4Q8WXT5 416 aaPredicted RBP8.74□□□□□ -1.01
CHMP2A-205ENST00000600006 CASP10Q92851 521 aa8.74□□□□□ -1.01
CHMP2A-205ENST00000600006 DNAJC19Q96DA6 116 aa8.74□□□□□ -1.01
CHMP2A-205ENST00000600006 SNX27Q96L92 541 aa8.74□□□□□ -1.01
CHMP2A-205ENST00000600006 PPP1R10Q96QC0 940 aaKnown RBP8.74□□□□□ -1.01
CHMP2A-205ENST00000600006 PAAF1Q9BRP4 392 aa8.74□□□□□ -1.01
CHMP2A-205ENST00000600006 ST6GALNAC4Q9H4F1 302 aa8.74□□□□□ -1.01
CHMP2A-205ENST00000600006 TOPORSQ9NS56 1045 aaPredicted RBP8.74□□□□□ -1.01
CHMP2A-205ENST00000600006 TFIP11Q9UBB9 837 aaKnown RBP8.74□□□□□ -1.01
CHMP2A-205ENST00000600006 ADAM28Q9UKQ2 775 aa8.74□□□□□ -1.01
CHMP2A-205ENST00000600006 TBX20Q9UMR3 447 aa8.74□□□□□ -1.01
CHMP2A-205ENST00000600006 NCOR1O75376 2440 aa8.74□□□□□ -1.01
CHMP2A-205ENST00000600006 MTCL1Q9Y4B5 1905 aaKnown RBP8.74□□□□□ -1.01
CHMP2A-205ENST00000600006 C2orf16Q68DN1 1984 aa8.73□□□□□ -1.01
CHMP2A-205ENST00000600006 VCANP13611 3396 aa8.73□□□□□ -1.01
CHMP2A-205ENST00000600006 CASTOR2A6NHX0 329 aa8.73□□□□□ -1.01
CHMP2A-205ENST00000600006 MYMKA6NI61 221 aa8.73□□□□□ -1.01
CHMP2A-205ENST00000600006 C19orf67A6NJJ6 358 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms