RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 SMAD2Q15796 467 aaKnown RBP24.81■■□□□ 1.56
CCDC9-204ENST00000599398 ZBTB33Q86T24 672 aa24.81■■□□□ 1.56
CCDC9-204ENST00000599398 ODF2LQ9ULJ1 636 aa24.81■■□□□ 1.56
CCDC9-204ENST00000599398 IRAK3Q9Y616 596 aa24.81■■□□□ 1.56
CCDC9-204ENST00000599398 TRIP11Q15643 1979 aa24.81■■□□□ 1.56
CCDC9-204ENST00000599398 F8W810 466 aa24.8■■□□□ 1.56
CCDC9-204ENST00000599398 FAM13AO94988 1023 aa24.8■■□□□ 1.56
CCDC9-204ENST00000599398 THP07101 528 aa24.8■■□□□ 1.56
CCDC9-204ENST00000599398 KCNC3Q14003 757 aa24.8■■□□□ 1.56
CCDC9-204ENST00000599398 SLC39A14Q15043 492 aa24.8■■□□□ 1.56
CCDC9-204ENST00000599398 STK38Q15208 465 aa24.8■■□□□ 1.56
CCDC9-204ENST00000599398 PTPN14Q15678 1187 aa24.8■■□□□ 1.56
CCDC9-204ENST00000599398 GJD3Q8N144 294 aa24.8■■□□□ 1.56
CCDC9-204ENST00000599398 TMEM161BQ8NDZ6 487 aa24.8■■□□□ 1.56
CCDC9-204ENST00000599398 RABGGTAQ92696 567 aa24.8■■□□□ 1.56
CCDC9-204ENST00000599398 CASP10Q92851 521 aa24.8■■□□□ 1.56
CCDC9-204ENST00000599398 CDT1Q9H211 546 aa24.8■■□□□ 1.56
CCDC9-204ENST00000599398 ZHX3Q9H4I2 956 aa24.8■■□□□ 1.56
CCDC9-204ENST00000599398 CD320Q9NPF0 282 aa24.8■■□□□ 1.56
CCDC9-204ENST00000599398 DAXXQ9UER7 740 aaPredicted RBP24.8■■□□□ 1.56
CCDC9-204ENST00000599398 PRKAG3Q9UGI9 489 aa24.8■■□□□ 1.56
CCDC9-204ENST00000599398 HCFC2Q9Y5Z7 792 aa24.8■■□□□ 1.56
CCDC9-204ENST00000599398 C2CD2LO14523 706 aa24.79■■□□□ 1.56
CCDC9-204ENST00000599398 PTGESO14684 152 aa24.79■■□□□ 1.56
CCDC9-204ENST00000599398 SOD2P04179 222 aa24.79■■□□□ 1.56
CCDC9-204ENST00000599398 URODP06132 367 aa24.79■■□□□ 1.56
CCDC9-204ENST00000599398 HARSP12081 509 aaKnown RBP24.79■■□□□ 1.56
CCDC9-204ENST00000599398 OSTNP61366 133 aa24.79■■□□□ 1.56
CCDC9-204ENST00000599398 TUSC3Q13454 348 aa24.79■■□□□ 1.56
CCDC9-204ENST00000599398 ANKRD54Q6NXT1 300 aa24.79■■□□□ 1.56
CCDC9-204ENST00000599398 TMEM184AQ6ZMB5 413 aa24.79■■□□□ 1.56
CCDC9-204ENST00000599398 MYCT1Q8N699 235 aa24.79■■□□□ 1.56
CCDC9-204ENST00000599398 KRI1Q8N9T8 703 aaKnown RBP24.79■■□□□ 1.56
CCDC9-204ENST00000599398 ZNF396Q96N95 335 aaPredicted RBP24.79■■□□□ 1.56
CCDC9-204ENST00000599398 HERC2P3Q9BVR0 1158 aa24.79■■□□□ 1.56
CCDC9-204ENST00000599398 CCDC94Q9BW85 323 aaPredicted RBP24.79■■□□□ 1.56
CCDC9-204ENST00000599398 APOL5Q9BWW9 433 aa24.79■■□□□ 1.56
CCDC9-204ENST00000599398 CXCL16Q9H2A7 254 aa24.79■■□□□ 1.56
CCDC9-204ENST00000599398 MRPL17Q9NRX2 175 aaKnown RBP24.79■■□□□ 1.56
CCDC9-204ENST00000599398 CACNG4Q9UBN1 327 aa24.79■■□□□ 1.56
CCDC9-204ENST00000599398 USP15Q9Y4E8 981 aaPredicted RBP24.79■■□□□ 1.56
CCDC9-204ENST00000599398 CASTOR2A6NHX0 329 aa24.78■■□□□ 1.56
CCDC9-204ENST00000599398 H0YCG3 227 aa24.78■■□□□ 1.56
CCDC9-204ENST00000599398 TBCAO75347 108 aaKnown RBP24.78■■□□□ 1.56
CCDC9-204ENST00000599398 MAPTP10636 758 aaKnown RBP24.78■■□□□ 1.56
CCDC9-204ENST00000599398 DDIT3P35638 169 aa24.78■■□□□ 1.56
CCDC9-204ENST00000599398 YARSP54577 528 aaKnown RBP24.78■■□□□ 1.56
CCDC9-204ENST00000599398 ZP2Q05996 745 aa24.78■■□□□ 1.56
CCDC9-204ENST00000599398 RRAGBQ5VZM2 374 aa24.78■■□□□ 1.56
CCDC9-204ENST00000599398 TAS1R1Q7RTX1 841 aa24.78■■□□□ 1.56
CCDC9-204ENST00000599398 ADHFE1Q8IWW8 467 aa24.78■■□□□ 1.56
CCDC9-204ENST00000599398 CEP120Q8N960 986 aa24.78■■□□□ 1.56
CCDC9-204ENST00000599398 EMILIN2Q9BXX0 1053 aa24.78■■□□□ 1.56
CCDC9-204ENST00000599398 PARVGQ9HBI0 331 aa24.78■■□□□ 1.56
CCDC9-204ENST00000599398 PTPRHQ9HD43 1115 aa24.78■■□□□ 1.56
CCDC9-204ENST00000599398 ANKFY1Q9P2R3 1169 aa24.78■■□□□ 1.56
CCDC9-204ENST00000599398 TFIP11Q9UBB9 837 aaKnown RBP24.78■■□□□ 1.56
CCDC9-204ENST00000599398 GRM5P41594 1212 aa24.77■■□□□ 1.56
CCDC9-204ENST00000599398 NASPP49321 788 aaPredicted RBP24.77■■□□□ 1.56
CCDC9-204ENST00000599398 NCKAP1LP55160 1127 aa24.77■■□□□ 1.56
CCDC9-204ENST00000599398 HSP90AA2PQ14568 343 aaPredicted RBP24.77■■□□□ 1.56
CCDC9-204ENST00000599398 FOXD4L6Q3SYB3 417 aaPredicted RBP24.77■■□□□ 1.56
CCDC9-204ENST00000599398 GLRA4Q5JXX5 417 aa24.77■■□□□ 1.56
CCDC9-204ENST00000599398 KIAA1841Q6NSI8 718 aa24.77■■□□□ 1.56
CCDC9-204ENST00000599398 MPZL3Q6UWV2 235 aa24.77■■□□□ 1.56
CCDC9-204ENST00000599398 FOXD4L3Q6VB84 417 aaPredicted RBP24.77■■□□□ 1.56
CCDC9-204ENST00000599398 HAUS6Q7Z4H7 955 aa24.77■■□□□ 1.56
CCDC9-204ENST00000599398 BICD1Q96G01 975 aa24.77■■□□□ 1.56
CCDC9-204ENST00000599398 STK17AQ9UEE5 414 aa24.77■■□□□ 1.56
CCDC9-204ENST00000599398 ADAM28Q9UKQ2 775 aa24.77■■□□□ 1.56
CCDC9-204ENST00000599398 K7ENM7 598 aa24.76■■□□□ 1.55
CCDC9-204ENST00000599398 TADA2AO75478 443 aa24.76■■□□□ 1.55
CCDC9-204ENST00000599398 ZSCAN22P10073 491 aaPredicted RBP24.76■■□□□ 1.55
CCDC9-204ENST00000599398 MCF2P10911 925 aa24.76■■□□□ 1.55
CCDC9-204ENST00000599398 PDIA4P13667 645 aaKnown RBP24.76■■□□□ 1.55
CCDC9-204ENST00000599398 HOXB8P17481 243 aaPredicted RBP24.76■■□□□ 1.55
CCDC9-204ENST00000599398 KLRC2P26717 231 aa24.76■■□□□ 1.55
CCDC9-204ENST00000599398 MATR3P43243 847 aaKnown RBP eCLIP24.76■■□□□ 1.55
CCDC9-204ENST00000599398 GLUD2P49448 558 aa24.76■■□□□ 1.55
CCDC9-204ENST00000599398 FUT10Q6P4F1 479 aa24.76■■□□□ 1.55
CCDC9-204ENST00000599398 SYCE2Q6PIF2 218 aa24.76■■□□□ 1.55
CCDC9-204ENST00000599398 HASPINQ8TF76 798 aa24.76■■□□□ 1.55
CCDC9-204ENST00000599398 ZBTB45Q96K62 511 aaPredicted RBP24.76■■□□□ 1.55
CCDC9-204ENST00000599398 POP1Q99575 1024 aaKnown RBP24.76■■□□□ 1.55
CCDC9-204ENST00000599398 PAAF1Q9BRP4 392 aa24.76■■□□□ 1.55
CCDC9-204ENST00000599398 TOPORSQ9NS56 1045 aaPredicted RBP24.76■■□□□ 1.55
CCDC9-204ENST00000599398 SSX2IPQ9Y2D8 614 aa24.76■■□□□ 1.55
CCDC9-204ENST00000599398 MORC2Q9Y6X9 1032 aaPredicted RBP24.76■■□□□ 1.55
CCDC9-204ENST00000599398 CITO14578 2027 aa24.76■■□□□ 1.55
CCDC9-204ENST00000599398 TOM1L1O75674 476 aa24.75■■□□□ 1.55
CCDC9-204ENST00000599398 CNPP09543 421 aaKnown RBP24.75■■□□□ 1.55
CCDC9-204ENST00000599398 EPCAMP16422 314 aa24.75■■□□□ 1.55
CCDC9-204ENST00000599398 PROZP22891 400 aa24.75■■□□□ 1.55
CCDC9-204ENST00000599398 TPRNQ4KMQ1 711 aa24.75■■□□□ 1.55
CCDC9-204ENST00000599398 PPFIBP1Q86W92 1011 aa24.75■■□□□ 1.55
CCDC9-204ENST00000599398 LINC00301Q8NCQ3 95 aa24.75■■□□□ 1.55
CCDC9-204ENST00000599398 KLHL5Q96PQ7 755 aa24.75■■□□□ 1.55
CCDC9-204ENST00000599398 PANK2Q9BZ23 570 aa24.75■■□□□ 1.55
CCDC9-204ENST00000599398 GPR62Q9BZJ7 368 aa24.75■■□□□ 1.55
CCDC9-204ENST00000599398 ABLIM1O14639 778 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms