RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 TBC1D32Q96NH3 1257 aa25.25■■□□□ 1.63
CCDC61-207ENST00000599044 MAN1C1Q9NR34 630 aa25.25■■□□□ 1.63
CCDC61-207ENST00000599044 LIMD1Q9UGP4 676 aa25.25■■□□□ 1.63
CCDC61-207ENST00000599044 ADAM28Q9UKQ2 775 aa25.25■■□□□ 1.63
CCDC61-207ENST00000599044 TDRD15B5MCY1 1934 aaKnown RBP25.25■■□□□ 1.63
CCDC61-207ENST00000599044 ZMYM2Q9UBW7 1377 aa25.24■■□□□ 1.63
CCDC61-207ENST00000599044 CASTOR2A6NHX0 329 aa25.24■■□□□ 1.63
CCDC61-207ENST00000599044 IGFBP6P24592 240 aaPredicted RBP25.24■■□□□ 1.63
CCDC61-207ENST00000599044 GJB2P29033 226 aa25.24■■□□□ 1.63
CCDC61-207ENST00000599044 PPP2R5AQ15172 486 aa25.24■■□□□ 1.63
CCDC61-207ENST00000599044 ZBTB33Q86T24 672 aa25.24■■□□□ 1.63
CCDC61-207ENST00000599044 HASPINQ8TF76 798 aa25.24■■□□□ 1.63
CCDC61-207ENST00000599044 KIFAP3Q92845 792 aa25.24■■□□□ 1.63
CCDC61-207ENST00000599044 IFT74Q96LB3 600 aa25.24■■□□□ 1.63
CCDC61-207ENST00000599044 RUSC1Q9BVN2 902 aa25.24■■□□□ 1.63
CCDC61-207ENST00000599044 GDAQ9Y2T3 454 aa25.24■■□□□ 1.63
CCDC61-207ENST00000599044 DENND4AQ7Z401 1863 aa25.23■■□□□ 1.63
CCDC61-207ENST00000599044 SPDYE4A6NLX3 237 aa25.23■■□□□ 1.63
CCDC61-207ENST00000599044 BRD1O95696 1058 aa25.23■■□□□ 1.63
CCDC61-207ENST00000599044 PDGFBP01127 241 aaPredicted RBP25.23■■□□□ 1.63
CCDC61-207ENST00000599044 RPL17P18621 184 aaKnown RBP25.23■■□□□ 1.63
CCDC61-207ENST00000599044 PRPHP41219 470 aa25.23■■□□□ 1.63
CCDC61-207ENST00000599044 TUSC3Q13454 348 aa25.23■■□□□ 1.63
CCDC61-207ENST00000599044 HSP90AA2PQ14568 343 aaPredicted RBP25.23■■□□□ 1.63
CCDC61-207ENST00000599044 DTHD1Q6ZMT9 781 aa25.23■■□□□ 1.63
CCDC61-207ENST00000599044 ALYREFQ86V81 257 aaKnown RBP25.23■■□□□ 1.63
CCDC61-207ENST00000599044 PALB2Q86YC2 1186 aa25.23■■□□□ 1.63
CCDC61-207ENST00000599044 GLYCTKQ8IVS8 523 aa25.23■■□□□ 1.63
CCDC61-207ENST00000599044 DNM3Q9UQ16 869 aa25.23■■□□□ 1.63
CCDC61-207ENST00000599044 SSX2IPQ9Y2D8 614 aa25.23■■□□□ 1.63
CCDC61-207ENST00000599044 PLXNA3P51805 1871 aa25.22■■□□□ 1.63
CCDC61-207ENST00000599044 LAD1O00515 517 aa25.22■■□□□ 1.63
CCDC61-207ENST00000599044 HIP1RO75146 1068 aa25.22■■□□□ 1.63
CCDC61-207ENST00000599044 TADA2AO75478 443 aa25.22■■□□□ 1.63
CCDC61-207ENST00000599044 RFPL2O75678 378 aa25.22■■□□□ 1.63
CCDC61-207ENST00000599044 ADH1AP07327 375 aa25.22■■□□□ 1.63
CCDC61-207ENST00000599044 NPTX2P47972 431 aa25.22■■□□□ 1.63
CCDC61-207ENST00000599044 PEX3P56589 373 aa25.22■■□□□ 1.63
CCDC61-207ENST00000599044 MAPK7Q13164 816 aa25.22■■□□□ 1.63
CCDC61-207ENST00000599044 USP41Q3LFD5 358 aa25.22■■□□□ 1.63
CCDC61-207ENST00000599044 RTP2Q5QGT7 225 aa25.22■■□□□ 1.63
CCDC61-207ENST00000599044 KRT79Q5XKE5 535 aa25.22■■□□□ 1.63
CCDC61-207ENST00000599044 ZDHHC14Q8IZN3 488 aa25.22■■□□□ 1.63
CCDC61-207ENST00000599044 TDRD5Q8NAT2 981 aaKnown RBP25.22■■□□□ 1.63
CCDC61-207ENST00000599044 RIN2Q8WYP3 895 aaPredicted RBP25.22■■□□□ 1.63
CCDC61-207ENST00000599044 RAB34Q9BZG1 259 aa25.22■■□□□ 1.63
CCDC61-207ENST00000599044 CCDC195A0A1B0GUA6 201 aa25.21■■□□□ 1.63
CCDC61-207ENST00000599044 KIF4AO95239 1232 aa25.21■■□□□ 1.63
CCDC61-207ENST00000599044 GLUD1P00367 558 aa25.21■■□□□ 1.63
CCDC61-207ENST00000599044 THP07101 528 aa25.21■■□□□ 1.63
CCDC61-207ENST00000599044 EFNA5P52803 228 aa25.21■■□□□ 1.63
CCDC61-207ENST00000599044 ATP2C1P98194 919 aaPredicted RBP25.21■■□□□ 1.63
CCDC61-207ENST00000599044 ATF7IP2Q5U623 682 aa25.21■■□□□ 1.63
CCDC61-207ENST00000599044 RINT1Q6NUQ1 792 aa25.21■■□□□ 1.63
CCDC61-207ENST00000599044 PRSS55Q6UWB4 352 aaPredicted RBP25.21■■□□□ 1.63
CCDC61-207ENST00000599044 C1orf186Q6ZWK4 172 aa25.21■■□□□ 1.63
CCDC61-207ENST00000599044 TAS1R3Q7RTX0 852 aa25.21■■□□□ 1.63
CCDC61-207ENST00000599044 FBXL6Q8N531 539 aa25.21■■□□□ 1.63
CCDC61-207ENST00000599044 PNMA5Q96PV4 448 aa25.21■■□□□ 1.63
CCDC61-207ENST00000599044 ADPGKQ9BRR6 497 aa25.21■■□□□ 1.63
CCDC61-207ENST00000599044 SORCS3Q9UPU3 1222 aa25.21■■□□□ 1.63
CCDC61-207ENST00000599044 USTQ9Y2C2 406 aa25.21■■□□□ 1.63
CCDC61-207ENST00000599044 STK24Q9Y6E0 443 aa25.21■■□□□ 1.63
CCDC61-207ENST00000599044 CCDC169A6NNP5 214 aa25.2■■□□□ 1.62
CCDC61-207ENST00000599044 SFI1A8K8P3 1242 aa25.2■■□□□ 1.62
CCDC61-207ENST00000599044 K7ERI5 159 aa25.2■■□□□ 1.62
CCDC61-207ENST00000599044 TGM5O43548 720 aa25.2■■□□□ 1.62
CCDC61-207ENST00000599044 VCPP55072 806 aaKnown RBP25.2■■□□□ 1.62
CCDC61-207ENST00000599044 ZRSR1Q15695 479 aaKnown RBP25.2■■□□□ 1.62
CCDC61-207ENST00000599044 RILPL1Q5EBL4 403 aa25.2■■□□□ 1.62
CCDC61-207ENST00000599044 LILRA6Q6PI73 481 aa25.2■■□□□ 1.62
CCDC61-207ENST00000599044 C15orf39Q6ZRI6 1047 aa25.2■■□□□ 1.62
CCDC61-207ENST00000599044 CEP120Q8N960 986 aa25.2■■□□□ 1.62
CCDC61-207ENST00000599044 PRSS33Q8NF86 280 aa25.2■■□□□ 1.62
CCDC61-207ENST00000599044 PLIN2Q99541 437 aa25.2■■□□□ 1.62
CCDC61-207ENST00000599044 KIF3AQ9Y496 699 aa25.2■■□□□ 1.62
CCDC61-207ENST00000599044 C2orf16Q68DN1 1984 aa25.19■■□□□ 1.62
CCDC61-207ENST00000599044 N4BP1O75113 896 aaKnown RBP25.19■■□□□ 1.62
CCDC61-207ENST00000599044 GLRA4Q5JXX5 417 aa25.19■■□□□ 1.62
CCDC61-207ENST00000599044 CMASQ8NFW8 434 aaPredicted RBP25.19■■□□□ 1.62
CCDC61-207ENST00000599044 ZNF707Q96C28 371 aaPredicted RBP25.19■■□□□ 1.62
CCDC61-207ENST00000599044 FNIP2Q9P278 1114 aa25.19■■□□□ 1.62
CCDC61-207ENST00000599044 MRE11P49959 708 aa25.18■■□□□ 1.62
CCDC61-207ENST00000599044 RAD51AP2Q09MP3 1159 aa25.18■■□□□ 1.62
CCDC61-207ENST00000599044 MTMR3Q13615 1198 aa25.18■■□□□ 1.62
CCDC61-207ENST00000599044 DCAF4L1Q3SXM0 396 aa25.18■■□□□ 1.62
CCDC61-207ENST00000599044 CCDC149Q6ZUS6 474 aa25.18■■□□□ 1.62
CCDC61-207ENST00000599044 SUGP1Q8IWZ8 645 aaKnown RBP25.18■■□□□ 1.62
CCDC61-207ENST00000599044 ACO2Q99798 780 aaKnown RBP25.18■■□□□ 1.62
CCDC61-207ENST00000599044 PTPRHQ9HD43 1115 aa25.18■■□□□ 1.62
CCDC61-207ENST00000599044 TNFSF13BQ9Y275 285 aa25.18■■□□□ 1.62
CCDC61-207ENST00000599044 SF3B1O75533 1304 aaKnown RBP eCLIP25.17■■□□□ 1.62
CCDC61-207ENST00000599044 VWA3AA6NCI4 1184 aa25.17■■□□□ 1.62
CCDC61-207ENST00000599044 H3BQV1 296 aa25.17■■□□□ 1.62
CCDC61-207ENST00000599044 HYIQ5T013 277 aa25.17■■□□□ 1.62
CCDC61-207ENST00000599044 FAM171A1Q5VUB5 890 aa25.17■■□□□ 1.62
CCDC61-207ENST00000599044 CD300LGQ6UXG3 332 aa25.17■■□□□ 1.62
CCDC61-207ENST00000599044 CEP57Q86XR8 500 aa25.17■■□□□ 1.62
CCDC61-207ENST00000599044 PLCD3Q8N3E9 789 aa25.17■■□□□ 1.62
CCDC61-207ENST00000599044 LNX1Q8TBB1 728 aaPredicted RBP25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms