RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 MXI1P50539 228 aa25.33■■□□□ 1.65
SYMPK-212ENST00000598896 CLDN10P78369 228 aa25.33■■□□□ 1.65
SYMPK-212ENST00000598896 ZBED6P86452 979 aa25.33■■□□□ 1.65
SYMPK-212ENST00000598896 THNSL1Q8IYQ7 743 aa25.33■■□□□ 1.65
SYMPK-212ENST00000598896 CCDC112Q8NEF3 446 aa25.33■■□□□ 1.65
SYMPK-212ENST00000598896 BAP1Q92560 729 aa25.33■■□□□ 1.65
SYMPK-212ENST00000598896 PLCB1Q9NQ66 1216 aa25.33■■□□□ 1.65
SYMPK-212ENST00000598896 CPSF3Q9UKF6 684 aaKnown RBP25.33■■□□□ 1.65
SYMPK-212ENST00000598896 PTPRJQ12913 1337 aa25.33■■□□□ 1.65
SYMPK-212ENST00000598896 A0A1B0GUA9 196 aa25.32■■□□□ 1.64
SYMPK-212ENST00000598896 LRRN2O75325 713 aa25.32■■□□□ 1.64
SYMPK-212ENST00000598896 HOXA11P31270 313 aaPredicted RBP25.32■■□□□ 1.64
SYMPK-212ENST00000598896 PTGISQ16647 500 aa25.32■■□□□ 1.64
SYMPK-212ENST00000598896 BRSK2Q8IWQ3 736 aa25.32■■□□□ 1.64
SYMPK-212ENST00000598896 LMO3Q8TAP4 145 aa25.32■■□□□ 1.64
SYMPK-212ENST00000598896 FECHP22830 423 aa25.32■■□□□ 1.64
SYMPK-212ENST00000598896 CRYBB1P53674 252 aaPredicted RBP25.32■■□□□ 1.64
SYMPK-212ENST00000598896 POLR2FP61218 127 aaKnown RBP25.32■■□□□ 1.64
SYMPK-212ENST00000598896 KLHDC7AQ5VTJ3 777 aa25.32■■□□□ 1.64
SYMPK-212ENST00000598896 LMBRD2Q68DH5 695 aaPredicted RBP25.32■■□□□ 1.64
SYMPK-212ENST00000598896 CATSPER4Q7RTX7 472 aa25.32■■□□□ 1.64
SYMPK-212ENST00000598896 USP37Q86T82 979 aa25.32■■□□□ 1.64
SYMPK-212ENST00000598896 TMEM192Q8IY95 271 aa25.32■■□□□ 1.64
SYMPK-212ENST00000598896 C17orf53Q8N3J3 647 aaPredicted RBP25.32■■□□□ 1.64
SYMPK-212ENST00000598896 ARRDC4Q8NCT1 418 aa25.32■■□□□ 1.64
SYMPK-212ENST00000598896 OR8K1Q8NGG5 319 aa25.32■■□□□ 1.64
SYMPK-212ENST00000598896 KIAA1524Q8TCG1 905 aa25.32■■□□□ 1.64
SYMPK-212ENST00000598896 ZNF516Q92618 1163 aa25.32■■□□□ 1.64
SYMPK-212ENST00000598896 CELF4Q9BZC1 486 aaKnown RBP25.32■■□□□ 1.64
SYMPK-212ENST00000598896 NLRC4Q9NPP4 1024 aa25.32■■□□□ 1.64
SYMPK-212ENST00000598896 TRMT13Q9NUP7 481 aaKnown RBP25.32■■□□□ 1.64
SYMPK-212ENST00000598896 CEP72Q9P209 647 aa25.32■■□□□ 1.64
SYMPK-212ENST00000598896 PMM2O15305 246 aa25.31■■□□□ 1.64
SYMPK-212ENST00000598896 N4BP1O75113 896 aaKnown RBP25.31■■□□□ 1.64
SYMPK-212ENST00000598896 OSTNP61366 133 aa25.31■■□□□ 1.64
SYMPK-212ENST00000598896 MRPS6P82932 125 aaKnown RBP25.31■■□□□ 1.64
SYMPK-212ENST00000598896 EPC2Q52LR7 807 aa25.31■■□□□ 1.64
SYMPK-212ENST00000598896 E4F1Q66K89 784 aaPredicted RBP25.31■■□□□ 1.64
SYMPK-212ENST00000598896 INTS2Q9H0H0 1204 aaKnown RBP25.31■■□□□ 1.64
SYMPK-212ENST00000598896 TMEM8AQ9HCN3 771 aa25.31■■□□□ 1.64
SYMPK-212ENST00000598896 AJAP1Q9UKB5 411 aaPredicted RBP25.31■■□□□ 1.64
SYMPK-212ENST00000598896 ANK1P16157 1881 aa25.31■■□□□ 1.64
SYMPK-212ENST00000598896 P4HA2O15460 535 aa25.3■■□□□ 1.64
SYMPK-212ENST00000598896 STX10O60499 249 aa25.3■■□□□ 1.64
SYMPK-212ENST00000598896 MCF2P10911 925 aa25.3■■□□□ 1.64
SYMPK-212ENST00000598896 UCHL3P15374 230 aa25.3■■□□□ 1.64
SYMPK-212ENST00000598896 MSNP26038 577 aaKnown RBP25.3■■□□□ 1.64
SYMPK-212ENST00000598896 HSP90AA2PQ14568 343 aaPredicted RBP25.3■■□□□ 1.64
SYMPK-212ENST00000598896 WDR59Q6PJI9 974 aa25.3■■□□□ 1.64
SYMPK-212ENST00000598896 SV2AQ7L0J3 742 aa25.3■■□□□ 1.64
SYMPK-212ENST00000598896 DEFB118Q96PH6 123 aa25.3■■□□□ 1.64
SYMPK-212ENST00000598896 FNBP1Q96RU3 617 aa25.3■■□□□ 1.64
SYMPK-212ENST00000598896 FHOD1Q9Y613 1164 aa25.3■■□□□ 1.64
SYMPK-212ENST00000598896 CDY2AQ9Y6F7 541 aa25.3■■□□□ 1.64
SYMPK-212ENST00000598896 GTF2H1P32780 548 aa25.3■■□□□ 1.64
SYMPK-212ENST00000598896 ENOX2Q16206 610 aaKnown RBP25.3■■□□□ 1.64
SYMPK-212ENST00000598896 KRT39Q6A163 491 aa25.3■■□□□ 1.64
SYMPK-212ENST00000598896 GJB7Q6PEY0 223 aa25.3■■□□□ 1.64
SYMPK-212ENST00000598896 CACNA2D4Q7Z3S7 1137 aa25.3■■□□□ 1.64
SYMPK-212ENST00000598896 RPAINQ86UA6 219 aa25.3■■□□□ 1.64
SYMPK-212ENST00000598896 ZNF710Q8N1W2 664 aa25.3■■□□□ 1.64
SYMPK-212ENST00000598896 EDEM3Q9BZQ6 932 aa25.3■■□□□ 1.64
SYMPK-212ENST00000598896 PHF24Q9UPV7 400 aa25.3■■□□□ 1.64
SYMPK-212ENST00000598896 LRRC53A6NM62 1247 aa25.29■■□□□ 1.64
SYMPK-212ENST00000598896 CTSHP09668 335 aa25.29■■□□□ 1.64
SYMPK-212ENST00000598896 CCL5P13501 91 aa25.29■■□□□ 1.64
SYMPK-212ENST00000598896 PCBP1Q15365 356 aaKnown RBP eCLIP25.29■■□□□ 1.64
SYMPK-212ENST00000598896 C15orf39Q6ZRI6 1047 aa25.29■■□□□ 1.64
SYMPK-212ENST00000598896 RRAGAQ7L523 313 aa25.29■■□□□ 1.64
SYMPK-212ENST00000598896 ZNF397Q8NF99 534 aaPredicted RBP25.29■■□□□ 1.64
SYMPK-212ENST00000598896 DHX38Q92620 1227 aaKnown RBP25.29■■□□□ 1.64
SYMPK-212ENST00000598896 RNF208Q9H0X6 261 aa25.29■■□□□ 1.64
SYMPK-212ENST00000598896 STARD7Q9NQZ5 370 aa25.29■■□□□ 1.64
SYMPK-212ENST00000598896 SOWAHDA6NJG2 315 aa25.28■■□□□ 1.64
SYMPK-212ENST00000598896 MEFVO15553 781 aaPredicted RBP25.28■■□□□ 1.64
SYMPK-212ENST00000598896 CHRNA1P02708 482 aa25.28■■□□□ 1.64
SYMPK-212ENST00000598896 HSPA8P11142 646 aaKnown RBP25.28■■□□□ 1.64
SYMPK-212ENST00000598896 TNNI1P19237 187 aa25.28■■□□□ 1.64
SYMPK-212ENST00000598896 PTPN11Q06124 597 aaPredicted RBP25.28■■□□□ 1.64
SYMPK-212ENST00000598896 RSPH3Q86UC2 560 aa25.28■■□□□ 1.64
SYMPK-212ENST00000598896 SEMA4DQ92854 862 aa25.28■■□□□ 1.64
SYMPK-212ENST00000598896 COQ4Q9Y3A0 265 aa25.28■■□□□ 1.64
SYMPK-212ENST00000598896 TRPV2Q9Y5S1 764 aa25.28■■□□□ 1.64
SYMPK-212ENST00000598896 KBTBD13C9JR72 458 aa25.28■■□□□ 1.64
SYMPK-212ENST00000598896 NRDCO43847 1150 aa25.28■■□□□ 1.64
SYMPK-212ENST00000598896 CXCL8P10145 99 aa25.28■■□□□ 1.64
SYMPK-212ENST00000598896 MGAT3Q09327 533 aa25.28■■□□□ 1.64
SYMPK-212ENST00000598896 MEA1Q16626 185 aa25.28■■□□□ 1.64
SYMPK-212ENST00000598896 PDXDC1Q6P996 788 aa25.28■■□□□ 1.64
SYMPK-212ENST00000598896 SLC43A3Q8NBI5 491 aa25.28■■□□□ 1.64
SYMPK-212ENST00000598896 EHBP1Q8NDI1 1231 aa25.28■■□□□ 1.64
SYMPK-212ENST00000598896 TAS1R2Q8TE23 839 aa25.28■■□□□ 1.64
SYMPK-212ENST00000598896 CGRRF1Q99675 332 aa25.28■■□□□ 1.64
SYMPK-212ENST00000598896 SENP6Q9GZR1 1112 aaPredicted RBP25.28■■□□□ 1.64
SYMPK-212ENST00000598896 M0QZ92 97 aa25.27■■□□□ 1.64
SYMPK-212ENST00000598896 DNM1LO00429 736 aa25.27■■□□□ 1.64
SYMPK-212ENST00000598896 STAG3L1P0CL83 205 aa25.27■■□□□ 1.64
SYMPK-212ENST00000598896 THPOP40225 353 aa25.27■■□□□ 1.64
SYMPK-212ENST00000598896 CETN1Q12798 172 aa25.27■■□□□ 1.64
SYMPK-212ENST00000598896 MTF1Q14872 753 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms