RNA–Protein interactions for RNA: ENST00000598587.1

ARHGEF1-216, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 359 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-216ENST00000598587 KANK3Q6NY19 840 aa13.19□□□□□ -0.3
ARHGEF1-216ENST00000598587 UNC13DQ70J99 1090 aa13.19□□□□□ -0.3
ARHGEF1-216ENST00000598587 ZNF720Q7Z2F6 126 aa13.19□□□□□ -0.3
ARHGEF1-216ENST00000598587 ZBTB33Q86T24 672 aa13.19□□□□□ -0.3
ARHGEF1-216ENST00000598587 CCDC47Q96A33 483 aaKnown RBP13.19□□□□□ -0.3
ARHGEF1-216ENST00000598587 CHAMP1Q96JM3 812 aa13.19□□□□□ -0.3
ARHGEF1-216ENST00000598587 ACCSQ96QU6 501 aa13.19□□□□□ -0.3
ARHGEF1-216ENST00000598587 FIZ1Q96SL8 496 aa13.19□□□□□ -0.3
ARHGEF1-216ENST00000598587 PTPRHQ9HD43 1115 aa13.19□□□□□ -0.3
ARHGEF1-216ENST00000598587 SNTG2Q9NY99 539 aa13.19□□□□□ -0.3
ARHGEF1-216ENST00000598587 SERTAD1Q9UHV2 236 aa13.19□□□□□ -0.3
ARHGEF1-216ENST00000598587 PLAGL2Q9UPG8 496 aa13.19□□□□□ -0.3
ARHGEF1-216ENST00000598587 USP20Q9Y2K6 914 aa13.19□□□□□ -0.3
ARHGEF1-216ENST00000598587 GDAQ9Y2T3 454 aa13.19□□□□□ -0.3
ARHGEF1-216ENST00000598587 UBE4BO95155 1302 aa13.18□□□□□ -0.3
ARHGEF1-216ENST00000598587 PVALEFA0A1B0GWK0 134 aa13.18□□□□□ -0.3
ARHGEF1-216ENST00000598587 ACTN4O43707 911 aaKnown RBP13.18□□□□□ -0.3
ARHGEF1-216ENST00000598587 THP07101 528 aa13.18□□□□□ -0.3
ARHGEF1-216ENST00000598587 NDUFA8P51970 172 aa13.18□□□□□ -0.3
ARHGEF1-216ENST00000598587 PLCB3Q01970 1234 aa13.18□□□□□ -0.3
ARHGEF1-216ENST00000598587 POSTNQ15063 836 aa13.18□□□□□ -0.3
ARHGEF1-216ENST00000598587 SYCP3Q8IZU3 236 aa13.18□□□□□ -0.3
ARHGEF1-216ENST00000598587 POF1BQ8WVV4 589 aa13.18□□□□□ -0.3
ARHGEF1-216ENST00000598587 ZFP42Q96MM3 310 aa13.18□□□□□ -0.3
ARHGEF1-216ENST00000598587 ACAP3Q96P50 834 aa13.18□□□□□ -0.3
ARHGEF1-216ENST00000598587 RNF39Q9H2S5 420 aa13.18□□□□□ -0.3
ARHGEF1-216ENST00000598587 NSUN3Q9H649 340 aaKnown RBP13.18□□□□□ -0.3
ARHGEF1-216ENST00000598587 NRDE2Q9H7Z3 1164 aa13.18□□□□□ -0.3
ARHGEF1-216ENST00000598587 TMEM206Q9H813 350 aa13.18□□□□□ -0.3
ARHGEF1-216ENST00000598587 ALG13Q9NP73 1137 aaKnown RBP13.18□□□□□ -0.3
ARHGEF1-216ENST00000598587 TLR9Q9NR96 1032 aa13.18□□□□□ -0.3
ARHGEF1-216ENST00000598587 EXOC1Q9NV70 894 aa13.18□□□□□ -0.3
ARHGEF1-216ENST00000598587 KLK14Q9P0G3 267 aa13.18□□□□□ -0.3
ARHGEF1-216ENST00000598587 TBC1D7Q9P0N9 293 aa13.18□□□□□ -0.3
ARHGEF1-216ENST00000598587 HCSTQ9UBK5 93 aa13.18□□□□□ -0.3
ARHGEF1-216ENST00000598587 HOOK1Q9UJC3 728 aaKnown RBP13.18□□□□□ -0.3
ARHGEF1-216ENST00000598587 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.18□□□□□ -0.3
ARHGEF1-216ENST00000598587 OGTO15294 1046 aa13.17□□□□□ -0.3
ARHGEF1-216ENST00000598587 GRM6O15303 877 aa13.17□□□□□ -0.3
ARHGEF1-216ENST00000598587 EIF3DO15371 548 aaKnown RBP eCLIP13.17□□□□□ -0.3
ARHGEF1-216ENST00000598587 PPP1R37O75864 691 aa13.17□□□□□ -0.3
ARHGEF1-216ENST00000598587 ALDH2P05091 517 aa13.17□□□□□ -0.3
ARHGEF1-216ENST00000598587 HSP90AA2PQ14568 343 aaPredicted RBP13.17□□□□□ -0.3
ARHGEF1-216ENST00000598587 SKIV2LQ15477 1246 aaKnown RBP13.17□□□□□ -0.3
ARHGEF1-216ENST00000598587 ZC2HC1CQ53FD0 456 aaPredicted RBP13.17□□□□□ -0.3
ARHGEF1-216ENST00000598587 FAM26FQ5R3K3 315 aa13.17□□□□□ -0.3
ARHGEF1-216ENST00000598587 SLC39A11Q8N1S5 342 aa13.17□□□□□ -0.3
ARHGEF1-216ENST00000598587 SPPL3Q8TCT6 385 aa13.17□□□□□ -0.3
ARHGEF1-216ENST00000598587 PPM1EQ8WY54 764 aa13.17□□□□□ -0.3
ARHGEF1-216ENST00000598587 MSTO1Q9BUK6 570 aa13.17□□□□□ -0.3
ARHGEF1-216ENST00000598587 ENTPD7Q9NQZ7 604 aa13.17□□□□□ -0.3
ARHGEF1-216ENST00000598587 SLC38A7Q9NVC3 462 aa13.17□□□□□ -0.3
ARHGEF1-216ENST00000598587 FAN1Q9Y2M0 1017 aa13.17□□□□□ -0.3
ARHGEF1-216ENST00000598587 PRRC2BQ5JSZ5 2229 aaKnown RBP13.17□□□□□ -0.3
ARHGEF1-216ENST00000598587 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.16□□□□□ -0.3
ARHGEF1-216ENST00000598587 ABLIM1O14639 778 aa13.16□□□□□ -0.3
ARHGEF1-216ENST00000598587 NCK2O43639 380 aa13.16□□□□□ -0.3
ARHGEF1-216ENST00000598587 ZNF202O95125 648 aa13.16□□□□□ -0.3
ARHGEF1-216ENST00000598587 GALTP07902 379 aa13.16□□□□□ -0.3
ARHGEF1-216ENST00000598587 CLTAP09496 248 aa13.16□□□□□ -0.3
ARHGEF1-216ENST00000598587 PBX3P40426 434 aa13.16□□□□□ -0.3
ARHGEF1-216ENST00000598587 OR1G1P47890 313 aa13.16□□□□□ -0.3
ARHGEF1-216ENST00000598587 SLC11A1P49279 550 aa13.16□□□□□ -0.3
ARHGEF1-216ENST00000598587 OSTNP61366 133 aa13.16□□□□□ -0.3
ARHGEF1-216ENST00000598587 FAM160A1Q05DH4 1040 aa13.16□□□□□ -0.3
ARHGEF1-216ENST00000598587 PPP2R3AQ06190 1150 aa13.16□□□□□ -0.3
ARHGEF1-216ENST00000598587 DSC1Q08554 894 aa13.16□□□□□ -0.3
ARHGEF1-216ENST00000598587 PSMD2Q13200 908 aa13.16□□□□□ -0.3
ARHGEF1-216ENST00000598587 TUSC3Q13454 348 aa13.16□□□□□ -0.3
ARHGEF1-216ENST00000598587 CUL4BQ13620 913 aa13.16□□□□□ -0.3
ARHGEF1-216ENST00000598587 CCDC85BQ15834 202 aaPredicted RBP13.16□□□□□ -0.3
ARHGEF1-216ENST00000598587 KRBA2Q6ZNG9 492 aa13.16□□□□□ -0.3
ARHGEF1-216ENST00000598587 ZNF280BQ86YH2 543 aa13.16□□□□□ -0.3
ARHGEF1-216ENST00000598587 COLGALT2Q8IYK4 626 aa13.16□□□□□ -0.3
ARHGEF1-216ENST00000598587 MICAL1Q8TDZ2 1067 aa13.16□□□□□ -0.3
ARHGEF1-216ENST00000598587 POMGNT1Q8WZA1 660 aa13.16□□□□□ -0.3
ARHGEF1-216ENST00000598587 PAGE5Q96GU1 130 aa13.16□□□□□ -0.3
ARHGEF1-216ENST00000598587 IGSF21Q96ID5 467 aa13.16□□□□□ -0.3
ARHGEF1-216ENST00000598587 SNX27Q96L92 541 aa13.16□□□□□ -0.3
ARHGEF1-216ENST00000598587 UROC1Q96N76 676 aa13.16□□□□□ -0.3
ARHGEF1-216ENST00000598587 COLEC11Q9BWP8 271 aa13.16□□□□□ -0.3
ARHGEF1-216ENST00000598587 BLZF1Q9H2G9 400 aa13.16□□□□□ -0.3
ARHGEF1-216ENST00000598587 GOLPH3LQ9H4A5 285 aa13.16□□□□□ -0.3
ARHGEF1-216ENST00000598587 DNAJB4Q9UDY4 337 aa13.16□□□□□ -0.3
ARHGEF1-216ENST00000598587 A0A0B4J269 797 aa13.15□□□□□ -0.3
ARHGEF1-216ENST00000598587 NRP1O14786 923 aa13.15□□□□□ -0.3
ARHGEF1-216ENST00000598587 KIAA0391O15091 583 aaKnown RBP13.15□□□□□ -0.3
ARHGEF1-216ENST00000598587 XPOTO43592 962 aaKnown RBP13.15□□□□□ -0.3
ARHGEF1-216ENST00000598587 DDHD2O94830 711 aa13.15□□□□□ -0.3
ARHGEF1-216ENST00000598587 KIF20AO95235 890 aa13.15□□□□□ -0.3
ARHGEF1-216ENST00000598587 LDHAP00338 332 aaKnown RBP13.15□□□□□ -0.3
ARHGEF1-216ENST00000598587 MYBP10242 640 aa13.15□□□□□ -0.3
ARHGEF1-216ENST00000598587 SMC1AQ14683 1233 aaKnown RBP13.15□□□□□ -0.3
ARHGEF1-216ENST00000598587 DDX53Q86TM3 631 aaKnown RBP13.15□□□□□ -0.3
ARHGEF1-216ENST00000598587 GRAMD1CQ8IYS0 662 aa13.15□□□□□ -0.3
ARHGEF1-216ENST00000598587 CEP120Q8N960 986 aa13.15□□□□□ -0.3
ARHGEF1-216ENST00000598587 ZBTB45Q96K62 511 aaPredicted RBP13.15□□□□□ -0.3
ARHGEF1-216ENST00000598587 IPO9Q96P70 1041 aaKnown RBP13.15□□□□□ -0.3
ARHGEF1-216ENST00000598587 TSPAN18Q96SJ8 248 aa13.15□□□□□ -0.3
ARHGEF1-216ENST00000598587 TCF25Q9BQ70 676 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms