RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 TUFT1Q9NNX1 390 aa18.82■□□□□ 0.6
PNKP-210ENST00000597965 B4GALT5O43286 388 aa18.81■□□□□ 0.6
PNKP-210ENST00000597965 PI15O43692 258 aa18.81■□□□□ 0.6
PNKP-210ENST00000597965 USO1O60763 962 aaKnown RBP18.81■□□□□ 0.6
PNKP-210ENST00000597965 ZMYND10O75800 440 aa18.81■□□□□ 0.6
PNKP-210ENST00000597965 THP07101 528 aa18.81■□□□□ 0.6
PNKP-210ENST00000597965 HNRNPA1P09651 372 aaKnown RBP eCLIP18.81■□□□□ 0.6
PNKP-210ENST00000597965 SPATA31D3P0C874 917 aa18.81■□□□□ 0.6
PNKP-210ENST00000597965 ATP2B1P20020 1258 aa18.81■□□□□ 0.6
PNKP-210ENST00000597965 SAFBQ15424 915 aaKnown RBP eCLIP18.81■□□□□ 0.6
PNKP-210ENST00000597965 MAPK6Q16659 721 aa18.81■□□□□ 0.6
PNKP-210ENST00000597965 LIN9Q5TKA1 542 aa18.81■□□□□ 0.6
PNKP-210ENST00000597965 PHLDB3Q6NSJ2 640 aa18.81■□□□□ 0.6
PNKP-210ENST00000597965 LILRA6Q6PI73 481 aa18.81■□□□□ 0.6
PNKP-210ENST00000597965 SPATA31D4Q6ZUB0 917 aa18.81■□□□□ 0.6
PNKP-210ENST00000597965 APBB1IPQ7Z5R6 666 aaPredicted RBP18.81■□□□□ 0.6
PNKP-210ENST00000597965 DIS3L2Q8IYB7 885 aaKnown RBP18.81■□□□□ 0.6
PNKP-210ENST00000597965 PIGOQ8TEQ8 1089 aa18.81■□□□□ 0.6
PNKP-210ENST00000597965 GTF3C6Q969F1 213 aa18.81■□□□□ 0.6
PNKP-210ENST00000597965 ZNF707Q96C28 371 aaPredicted RBP18.81■□□□□ 0.6
PNKP-210ENST00000597965 SHDQ96IW2 340 aa18.81■□□□□ 0.6
PNKP-210ENST00000597965 MTMR9Q96QG7 549 aa18.81■□□□□ 0.6
PNKP-210ENST00000597965 TTPALQ9BTX7 342 aa18.81■□□□□ 0.6
PNKP-210ENST00000597965 FAM205CA6NFA0 338 aa18.8■□□□□ 0.6
PNKP-210ENST00000597965 BTBD18B2RXH4 712 aa18.8■□□□□ 0.6
PNKP-210ENST00000597965 NARSO43776 548 aaKnown RBP18.8■□□□□ 0.6
PNKP-210ENST00000597965 FDPSP14324 419 aaKnown RBP18.8■□□□□ 0.6
PNKP-210ENST00000597965 ORC2Q13416 577 aaPredicted RBP18.8■□□□□ 0.6
PNKP-210ENST00000597965 PPP2R5AQ15172 486 aa18.8■□□□□ 0.6
PNKP-210ENST00000597965 CDCA2Q69YH5 1023 aaPredicted RBP18.8■□□□□ 0.6
PNKP-210ENST00000597965 ZC3H14Q6PJT7 736 aaKnown RBP18.8■□□□□ 0.6
PNKP-210ENST00000597965 RTL10Q7L3V2 364 aa18.8■□□□□ 0.6
PNKP-210ENST00000597965 GET4Q7L5D6 327 aaPredicted RBP18.8■□□□□ 0.6
PNKP-210ENST00000597965 FEZF2Q8TBJ5 459 aa18.8■□□□□ 0.6
PNKP-210ENST00000597965 RSAD2Q8WXG1 361 aa18.8■□□□□ 0.6
PNKP-210ENST00000597965 MYADMQ96S97 322 aa18.8■□□□□ 0.6
PNKP-210ENST00000597965 FZD8Q9H461 694 aa18.8■□□□□ 0.6
PNKP-210ENST00000597965 SLC2A4RGQ9NR83 387 aa18.8■□□□□ 0.6
PNKP-210ENST00000597965 KLK14Q9P0G3 267 aa18.8■□□□□ 0.6
PNKP-210ENST00000597965 ANHXE9PGG2 379 aa18.79■□□□□ 0.6
PNKP-210ENST00000597965 F8W810 466 aa18.79■□□□□ 0.6
PNKP-210ENST00000597965 XYLBO75191 536 aa18.79■□□□□ 0.6
PNKP-210ENST00000597965 FSHRP23945 695 aa18.79■□□□□ 0.6
PNKP-210ENST00000597965 HOXA9P31269 272 aa18.79■□□□□ 0.6
PNKP-210ENST00000597965 PRPF4BQ13523 1007 aaKnown RBP18.79■□□□□ 0.6
PNKP-210ENST00000597965 MTSS1LQ765P7 747 aa18.79■□□□□ 0.6
PNKP-210ENST00000597965 GLYCTKQ8IVS8 523 aa18.79■□□□□ 0.6
PNKP-210ENST00000597965 ADSSL1Q8N142 457 aa18.79■□□□□ 0.6
PNKP-210ENST00000597965 PIK3R5Q8WYR1 880 aa18.79■□□□□ 0.6
PNKP-210ENST00000597965 B3GALT6Q96L58 329 aa18.79■□□□□ 0.6
PNKP-210ENST00000597965 POLR3CQ9BUI4 534 aaPredicted RBP18.79■□□□□ 0.6
PNKP-210ENST00000597965 CA14Q9ULX7 337 aa18.79■□□□□ 0.6
PNKP-210ENST00000597965 DOCK8Q8NF50 2099 aa18.78■□□□□ 0.6
PNKP-210ENST00000597965 KRBA1A5PL33 1030 aa18.78■□□□□ 0.6
PNKP-210ENST00000597965 POTEMA6NI47 508 aa18.78■□□□□ 0.6
PNKP-210ENST00000597965 MYBP10242 640 aa18.78■□□□□ 0.6
PNKP-210ENST00000597965 MUTP22033 750 aa18.78■□□□□ 0.6
PNKP-210ENST00000597965 UVSSAQ2YD98 709 aa18.78■□□□□ 0.6
PNKP-210ENST00000597965 PPM1LQ5SGD2 360 aa18.78■□□□□ 0.6
PNKP-210ENST00000597965 FAM171A1Q5VUB5 890 aa18.78■□□□□ 0.6
PNKP-210ENST00000597965 MAEAQ7L5Y9 396 aa18.78■□□□□ 0.6
PNKP-210ENST00000597965 ERMP1Q7Z2K6 904 aa18.78■□□□□ 0.6
PNKP-210ENST00000597965 CDR2LQ86X02 465 aaPredicted RBP18.78■□□□□ 0.6
PNKP-210ENST00000597965 CATSPER3Q86XQ3 398 aa18.78■□□□□ 0.6
PNKP-210ENST00000597965 NSUN7Q8NE18 718 aaKnown RBP18.78■□□□□ 0.6
PNKP-210ENST00000597965 TBC1D17Q9HA65 648 aa18.78■□□□□ 0.6
PNKP-210ENST00000597965 ARHGEF3Q9NR81 526 aa18.78■□□□□ 0.6
PNKP-210ENST00000597965 FBXW11Q9UKB1 542 aa18.78■□□□□ 0.6
PNKP-210ENST00000597965 SIT1Q9Y3P8 196 aa18.78■□□□□ 0.6
PNKP-210ENST00000597965 ACKR2O00590 384 aa18.77■□□□□ 0.6
PNKP-210ENST00000597965 TRAPPC3O43617 180 aa18.77■□□□□ 0.6
PNKP-210ENST00000597965 SPATA31C1P0DKV0 1188 aa18.77■□□□□ 0.6
PNKP-210ENST00000597965 RPA1P27694 616 aa18.77■□□□□ 0.6
PNKP-210ENST00000597965 NAMPTP43490 491 aa18.77■□□□□ 0.6
PNKP-210ENST00000597965 EFNA5P52803 228 aa18.77■□□□□ 0.6
PNKP-210ENST00000597965 HTR4Q13639 388 aa18.77■□□□□ 0.6
PNKP-210ENST00000597965 PSMD5Q16401 504 aa18.77■□□□□ 0.6
PNKP-210ENST00000597965 ME3Q16798 604 aa18.77■□□□□ 0.6
PNKP-210ENST00000597965 DCAF4L1Q3SXM0 396 aa18.77■□□□□ 0.6
PNKP-210ENST00000597965 RTP2Q5QGT7 225 aa18.77■□□□□ 0.6
PNKP-210ENST00000597965 HAUS3Q68CZ6 603 aa18.77■□□□□ 0.6
PNKP-210ENST00000597965 DCLRE1AQ6PJP8 1040 aa18.77■□□□□ 0.6
PNKP-210ENST00000597965 CEP57Q86XR8 500 aa18.77■□□□□ 0.6
PNKP-210ENST00000597965 NECAB1Q8N987 351 aa18.77■□□□□ 0.6
PNKP-210ENST00000597965 DEPTORQ8TB45 409 aa18.77■□□□□ 0.6
PNKP-210ENST00000597965 KCNG4Q8TDN1 519 aa18.77■□□□□ 0.6
PNKP-210ENST00000597965 GPR152Q8TDT2 470 aa18.77■□□□□ 0.6
PNKP-210ENST00000597965 BORCS6Q96GS4 357 aa18.77■□□□□ 0.6
PNKP-210ENST00000597965 CDH7Q9ULB5 785 aa18.77■□□□□ 0.6
PNKP-210ENST00000597965 VPS13AQ96RL7 3174 aa18.77■□□□□ 0.6
PNKP-210ENST00000597965 ARHGEF35A5YM69 484 aa18.76■□□□□ 0.59
PNKP-210ENST00000597965 CASTOR2A6NHX0 329 aa18.76■□□□□ 0.59
PNKP-210ENST00000597965 LMNAP02545 664 aaKnown RBP18.76■□□□□ 0.59
PNKP-210ENST00000597965 C8AP07357 584 aa18.76■□□□□ 0.59
PNKP-210ENST00000597965 POU2F2P09086 479 aa18.76■□□□□ 0.59
PNKP-210ENST00000597965 RPL17P18621 184 aaKnown RBP18.76■□□□□ 0.59
PNKP-210ENST00000597965 MCM7P33993 719 aa18.76■□□□□ 0.59
PNKP-210ENST00000597965 RBM25P49756 843 aaKnown RBP18.76■□□□□ 0.59
PNKP-210ENST00000597965 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.76■□□□□ 0.59
PNKP-210ENST00000597965 IFT74Q96LB3 600 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms