RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 CIITAP33076 1130 aa17.3■□□□□ 0.36
LIG1-214ENST00000597146 FGD1P98174 961 aa17.3■□□□□ 0.36
LIG1-214ENST00000597146 SATB1Q01826 763 aa17.3■□□□□ 0.36
LIG1-214ENST00000597146 NECTIN1Q15223 517 aa17.3■□□□□ 0.36
LIG1-214ENST00000597146 RTN1Q16799 776 aa17.3■□□□□ 0.36
LIG1-214ENST00000597146 LRCH2Q5VUJ6 765 aa17.3■□□□□ 0.36
LIG1-214ENST00000597146 POTEHQ6S545 545 aa17.3■□□□□ 0.36
LIG1-214ENST00000597146 REXO1Q8N1G1 1221 aaKnown RBP17.3■□□□□ 0.36
LIG1-214ENST00000597146 APOL6Q9BWW8 343 aa17.3■□□□□ 0.36
LIG1-214ENST00000597146 TEKT3Q9BXF9 490 aa17.3■□□□□ 0.36
LIG1-214ENST00000597146 ADAM28Q9UKQ2 775 aa17.3■□□□□ 0.36
LIG1-214ENST00000597146 ZMIZ1Q9ULJ6 1067 aa17.3■□□□□ 0.36
LIG1-214ENST00000597146 DSPP15924 2871 aaKnown RBP17.3■□□□□ 0.36
LIG1-214ENST00000597146 DDX11L8A8MPP1 907 aa17.29■□□□□ 0.36
LIG1-214ENST00000597146 CHURC1-FNTBB4DL54 471 aa17.29■□□□□ 0.36
LIG1-214ENST00000597146 ADAM12O43184 909 aa17.29■□□□□ 0.36
LIG1-214ENST00000597146 HRO43593 1189 aa17.29■□□□□ 0.36
LIG1-214ENST00000597146 EDIL3O43854 480 aa17.29■□□□□ 0.36
LIG1-214ENST00000597146 ECI2O75521 394 aa17.29■□□□□ 0.36
LIG1-214ENST00000597146 SRGAP2CP0DJJ0 459 aa17.29■□□□□ 0.36
LIG1-214ENST00000597146 FNTBP49356 437 aa17.29■□□□□ 0.36
LIG1-214ENST00000597146 CREMQ03060 361 aa17.29■□□□□ 0.36
LIG1-214ENST00000597146 GRM2Q14416 872 aa17.29■□□□□ 0.36
LIG1-214ENST00000597146 PABPC1LQ4VXU2 614 aaKnown RBP17.29■□□□□ 0.36
LIG1-214ENST00000597146 MIER3Q7Z3K6 550 aa17.29■□□□□ 0.36
LIG1-214ENST00000597146 SLC7A14Q8TBB6 771 aa17.29■□□□□ 0.36
LIG1-214ENST00000597146 HASPINQ8TF76 798 aa17.29■□□□□ 0.36
LIG1-214ENST00000597146 SLC5A5Q92911 643 aa17.29■□□□□ 0.36
LIG1-214ENST00000597146 CLSTN3Q9BQT9 956 aa17.29■□□□□ 0.36
LIG1-214ENST00000597146 UBN1Q9NPG3 1134 aa17.29■□□□□ 0.36
LIG1-214ENST00000597146 BMP2KQ9NSY1 1161 aaPredicted RBP17.29■□□□□ 0.36
LIG1-214ENST00000597146 DNMT3BQ9UBC3 853 aaKnown RBP17.29■□□□□ 0.36
LIG1-214ENST00000597146 GCN1Q92616 2671 aaKnown RBP17.29■□□□□ 0.36
LIG1-214ENST00000597146 XYLBO75191 536 aa17.28■□□□□ 0.36
LIG1-214ENST00000597146 NR1I2O75469 434 aa17.28■□□□□ 0.36
LIG1-214ENST00000597146 HOXA9P31269 272 aa17.28■□□□□ 0.36
LIG1-214ENST00000597146 CCR3P51677 355 aa17.28■□□□□ 0.36
LIG1-214ENST00000597146 KRT32Q14532 448 aa17.28■□□□□ 0.36
LIG1-214ENST00000597146 PPP2R5DQ14738 602 aa17.28■□□□□ 0.36
LIG1-214ENST00000597146 SF3A2Q15428 464 aaKnown RBP17.28■□□□□ 0.36
LIG1-214ENST00000597146 AASDHQ4L235 1098 aaPredicted RBP17.28■□□□□ 0.36
LIG1-214ENST00000597146 ANO5Q75V66 913 aa17.28■□□□□ 0.36
LIG1-214ENST00000597146 GPR65Q8IYL9 337 aa17.28■□□□□ 0.36
LIG1-214ENST00000597146 TMEM143Q96AN5 459 aa17.28■□□□□ 0.36
LIG1-214ENST00000597146 MCRS1Q96EZ8 462 aa17.28■□□□□ 0.36
LIG1-214ENST00000597146 RIT2Q99578 217 aa17.28■□□□□ 0.36
LIG1-214ENST00000597146 PAAF1Q9BRP4 392 aa17.28■□□□□ 0.36
LIG1-214ENST00000597146 RXFP3Q9NSD7 469 aa17.28■□□□□ 0.36
LIG1-214ENST00000597146 BRPF3Q9ULD4 1205 aa17.28■□□□□ 0.36
LIG1-214ENST00000597146 CCDC6Q16204 474 aa17.27■□□□□ 0.36
LIG1-214ENST00000597146 PSMD5Q16401 504 aa17.27■□□□□ 0.36
LIG1-214ENST00000597146 PFKFB3Q16875 520 aaPredicted RBP17.27■□□□□ 0.36
LIG1-214ENST00000597146 SLC5A9Q2M3M2 681 aa17.27■□□□□ 0.36
LIG1-214ENST00000597146 ERICH6BQ5W0A0 696 aa17.27■□□□□ 0.36
LIG1-214ENST00000597146 TANGO2Q6ICL3 276 aa17.27■□□□□ 0.36
LIG1-214ENST00000597146 UNQ6494/PRO21346Q6UXR6 183 aa17.27■□□□□ 0.36
LIG1-214ENST00000597146 SRGAP1Q7Z6B7 1085 aa17.27■□□□□ 0.36
LIG1-214ENST00000597146 ZNF579Q8NAF0 562 aaKnown RBP17.27■□□□□ 0.36
LIG1-214ENST00000597146 CNNM3Q8NE01 707 aa17.27■□□□□ 0.36
LIG1-214ENST00000597146 GSTCDQ8NEC7 633 aa17.27■□□□□ 0.36
LIG1-214ENST00000597146 PRPF31Q8WWY3 499 aaKnown RBP17.27■□□□□ 0.36
LIG1-214ENST00000597146 DNASE1L2Q92874 299 aa17.27■□□□□ 0.36
LIG1-214ENST00000597146 CPB2Q96IY4 423 aa17.27■□□□□ 0.36
LIG1-214ENST00000597146 TCEANC2Q96MN5 208 aa17.27■□□□□ 0.36
LIG1-214ENST00000597146 ZMYND12Q9H0C1 365 aa17.27■□□□□ 0.36
LIG1-214ENST00000597146 NXF3Q9H4D5 531 aaKnown RBP17.27■□□□□ 0.36
LIG1-214ENST00000597146 NAP1L2Q9ULW6 460 aaPredicted RBP17.27■□□□□ 0.36
LIG1-214ENST00000597146 MRPS23Q9Y3D9 190 aaKnown RBP17.27■□□□□ 0.36
LIG1-214ENST00000597146 SF3B1O75533 1304 aaKnown RBP eCLIP17.26■□□□□ 0.35
LIG1-214ENST00000597146 ESYT2A0FGR8 921 aa17.26■□□□□ 0.35
LIG1-214ENST00000597146 GOLGA8AA7E2F4 631 aa17.26■□□□□ 0.35
LIG1-214ENST00000597146 GOLGA8BA8MQT2 603 aa17.26■□□□□ 0.35
LIG1-214ENST00000597146 TM4SF5O14894 197 aa17.26■□□□□ 0.35
LIG1-214ENST00000597146 ZBTB43O43298 467 aa17.26■□□□□ 0.35
LIG1-214ENST00000597146 REC8O95072 547 aa17.26■□□□□ 0.35
LIG1-214ENST00000597146 CEBPBP17676 345 aa17.26■□□□□ 0.35
LIG1-214ENST00000597146 CDC27P30260 824 aa17.26■□□□□ 0.35
LIG1-214ENST00000597146 NPEPPSP55786 919 aa17.26■□□□□ 0.35
LIG1-214ENST00000597146 GAS6Q14393 721 aa17.26■□□□□ 0.35
LIG1-214ENST00000597146 CEP57Q86XR8 500 aa17.26■□□□□ 0.35
LIG1-214ENST00000597146 FAM160A2Q8N612 972 aaPredicted RBP17.26■□□□□ 0.35
LIG1-214ENST00000597146 LMAN1LQ9HAT1 526 aa17.26■□□□□ 0.35
LIG1-214ENST00000597146 C6orf50Q9HD87 102 aa17.26■□□□□ 0.35
LIG1-214ENST00000597146 KCNH3Q9ULD8 1083 aa17.26■□□□□ 0.35
LIG1-214ENST00000597146 ITPR1Q14643 2758 aa17.26■□□□□ 0.35
LIG1-214ENST00000597146 NRG2O14511 850 aaPredicted RBP17.25■□□□□ 0.35
LIG1-214ENST00000597146 TSPAN1O60635 241 aa17.25■□□□□ 0.35
LIG1-214ENST00000597146 TADA2AO75478 443 aa17.25■□□□□ 0.35
LIG1-214ENST00000597146 PSMD10O75832 226 aa17.25■□□□□ 0.35
LIG1-214ENST00000597146 ERLIN2O94905 339 aa17.25■□□□□ 0.35
LIG1-214ENST00000597146 FCARP24071 287 aa17.25■□□□□ 0.35
LIG1-214ENST00000597146 AKAP5P24588 427 aa17.25■□□□□ 0.35
LIG1-214ENST00000597146 HOXC13P31276 330 aa17.25■□□□□ 0.35
LIG1-214ENST00000597146 LIMK1P53667 647 aa17.25■□□□□ 0.35
LIG1-214ENST00000597146 LAMTOR4Q0VGL1 99 aa17.25■□□□□ 0.35
LIG1-214ENST00000597146 HSP90AA2PQ14568 343 aaPredicted RBP17.25■□□□□ 0.35
LIG1-214ENST00000597146 AXDND1Q5T1B0 1012 aaPredicted RBP17.25■□□□□ 0.35
LIG1-214ENST00000597146 HEATR6Q6AI08 1181 aaKnown RBP17.25■□□□□ 0.35
LIG1-214ENST00000597146 MAMSTRQ6ZN01 415 aa17.25■□□□□ 0.35
LIG1-214ENST00000597146 RDM1Q8NG50 284 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms