RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 CAVIN2O95810 425 aa14.24□□□□□ -0.13
SCAF1-202ENST00000595242 GLUD1P00367 558 aa14.24□□□□□ -0.13
SCAF1-202ENST00000595242 SPATA31D3P0C874 917 aa14.24□□□□□ -0.13
SCAF1-202ENST00000595242 KCNA4P22459 653 aa14.24□□□□□ -0.13
SCAF1-202ENST00000595242 KRT2P35908 639 aa14.24□□□□□ -0.13
SCAF1-202ENST00000595242 MAGEA9P43362 315 aa14.24□□□□□ -0.13
SCAF1-202ENST00000595242 TOB1P50616 345 aaPredicted RBP14.24□□□□□ -0.13
SCAF1-202ENST00000595242 PRKCQQ04759 706 aa14.24□□□□□ -0.13
SCAF1-202ENST00000595242 TYRO3Q06418 890 aa14.24□□□□□ -0.13
SCAF1-202ENST00000595242 MLF2Q15773 248 aaPredicted RBP14.24□□□□□ -0.13
SCAF1-202ENST00000595242 SLC44A4Q53GD3 710 aa14.24□□□□□ -0.13
SCAF1-202ENST00000595242 SPATA31D4Q6ZUB0 917 aa14.24□□□□□ -0.13
SCAF1-202ENST00000595242 LINC01465Q8N7H1 131 aa14.24□□□□□ -0.13
SCAF1-202ENST00000595242 FGF14Q92915 247 aa14.24□□□□□ -0.13
SCAF1-202ENST00000595242 TIGD1Q96MW7 591 aa14.24□□□□□ -0.13
SCAF1-202ENST00000595242 SCLT1Q96NL6 688 aa14.24□□□□□ -0.13
SCAF1-202ENST00000595242 RPS6KC1Q96S38 1066 aa14.24□□□□□ -0.13
SCAF1-202ENST00000595242 TRAIPQ9BWF2 469 aa14.24□□□□□ -0.13
SCAF1-202ENST00000595242 HPSEQ9Y251 543 aa14.24□□□□□ -0.13
SCAF1-202ENST00000595242 hCG_1642624A0A1W2PR95 340 aa14.23□□□□□ -0.13
SCAF1-202ENST00000595242 ALDH2P05091 517 aa14.23□□□□□ -0.13
SCAF1-202ENST00000595242 URODP06132 367 aa14.23□□□□□ -0.13
SCAF1-202ENST00000595242 SKIP12755 728 aa14.23□□□□□ -0.13
SCAF1-202ENST00000595242 CD72P21854 359 aa14.23□□□□□ -0.13
SCAF1-202ENST00000595242 LPAL2Q16609 132 aa14.23□□□□□ -0.13
SCAF1-202ENST00000595242 ZBTB41Q5SVQ8 909 aa14.23□□□□□ -0.13
SCAF1-202ENST00000595242 TWF2Q6IBS0 349 aaKnown RBP14.23□□□□□ -0.13
SCAF1-202ENST00000595242 PARM1Q6UWI2 310 aa14.23□□□□□ -0.13
SCAF1-202ENST00000595242 CCDC82Q8N4S0 544 aa14.23□□□□□ -0.13
SCAF1-202ENST00000595242 DAGLBQ8NCG7 672 aa14.23□□□□□ -0.13
SCAF1-202ENST00000595242 FAM200AQ8TCP9 573 aa14.23□□□□□ -0.13
SCAF1-202ENST00000595242 NLRP7Q8WX94 980 aa14.23□□□□□ -0.13
SCAF1-202ENST00000595242 NT5C3AQ9H0P0 336 aa14.23□□□□□ -0.13
SCAF1-202ENST00000595242 BRMS1Q9HCU9 246 aa14.23□□□□□ -0.13
SCAF1-202ENST00000595242 VPS54Q9P1Q0 977 aa14.23□□□□□ -0.13
SCAF1-202ENST00000595242 RAB23Q9ULC3 237 aa14.23□□□□□ -0.13
SCAF1-202ENST00000595242 SSX2IPQ9Y2D8 614 aa14.23□□□□□ -0.13
SCAF1-202ENST00000595242 FAN1Q9Y2M0 1017 aa14.23□□□□□ -0.13
SCAF1-202ENST00000595242 ZFP37Q9Y6Q3 630 aaPredicted RBP14.23□□□□□ -0.13
SCAF1-202ENST00000595242 NOTCH4Q99466 2003 aa14.23□□□□□ -0.13
SCAF1-202ENST00000595242 SDK1Q7Z5N4 2213 aa14.23□□□□□ -0.13
SCAF1-202ENST00000595242 F5P12259 2224 aa14.22□□□□□ -0.13
SCAF1-202ENST00000595242 SPAG17Q6Q759 2223 aa14.22□□□□□ -0.13
SCAF1-202ENST00000595242 DHX15O43143 795 aaKnown RBP14.22□□□□□ -0.13
SCAF1-202ENST00000595242 DDHD2O94830 711 aa14.22□□□□□ -0.13
SCAF1-202ENST00000595242 PAPLNO95428 1278 aa14.22□□□□□ -0.13
SCAF1-202ENST00000595242 BMP15O95972 392 aa14.22□□□□□ -0.13
SCAF1-202ENST00000595242 SOD2P04179 222 aa14.22□□□□□ -0.13
SCAF1-202ENST00000595242 NR5A1Q13285 461 aa14.22□□□□□ -0.13
SCAF1-202ENST00000595242 CAMK4Q16566 473 aa14.22□□□□□ -0.13
SCAF1-202ENST00000595242 HS1BP3Q53T59 392 aa14.22□□□□□ -0.13
SCAF1-202ENST00000595242 RESP18Q5W5W9 173 aa14.22□□□□□ -0.13
SCAF1-202ENST00000595242 ELOA2Q8IYF1 753 aaPredicted RBP14.22□□□□□ -0.13
SCAF1-202ENST00000595242 ZNF579Q8NAF0 562 aaKnown RBP14.22□□□□□ -0.13
SCAF1-202ENST00000595242 RNF214Q8ND24 703 aa14.22□□□□□ -0.13
SCAF1-202ENST00000595242 OXER1Q8TDS5 423 aa14.22□□□□□ -0.13
SCAF1-202ENST00000595242 HDAC7Q8WUI4 952 aa14.22□□□□□ -0.13
SCAF1-202ENST00000595242 CLDN23Q96B33 292 aa14.22□□□□□ -0.13
SCAF1-202ENST00000595242 FAM126AQ9BYI3 521 aaPredicted RBP14.22□□□□□ -0.13
SCAF1-202ENST00000595242 LTB4R2Q9NPC1 389 aa14.22□□□□□ -0.13
SCAF1-202ENST00000595242 PRMT8Q9NR22 394 aaPredicted RBP14.22□□□□□ -0.13
SCAF1-202ENST00000595242 NRP1O14786 923 aa14.21□□□□□ -0.13
SCAF1-202ENST00000595242 PFKFB1P16118 471 aa14.21□□□□□ -0.13
SCAF1-202ENST00000595242 ZNF76P36508 570 aa14.21□□□□□ -0.13
SCAF1-202ENST00000595242 TRAPPC10P48553 1259 aa14.21□□□□□ -0.13
SCAF1-202ENST00000595242 NDUFA8P51970 172 aa14.21□□□□□ -0.13
SCAF1-202ENST00000595242 LAIR1Q6GTX8 287 aa14.21□□□□□ -0.13
SCAF1-202ENST00000595242 GALNT17Q6IS24 598 aa14.21□□□□□ -0.13
SCAF1-202ENST00000595242 SHC4Q6S5L8 630 aa14.21□□□□□ -0.13
SCAF1-202ENST00000595242 SASS6Q6UVJ0 657 aa14.21□□□□□ -0.13
SCAF1-202ENST00000595242 RSPO2Q6UXX9 243 aaPredicted RBP14.21□□□□□ -0.13
SCAF1-202ENST00000595242 TAS1R1Q7RTX1 841 aa14.21□□□□□ -0.13
SCAF1-202ENST00000595242 HEATR3Q7Z4Q2 680 aa14.21□□□□□ -0.13
SCAF1-202ENST00000595242 PALB2Q86YC2 1186 aa14.21□□□□□ -0.13
SCAF1-202ENST00000595242 URGCPQ8TCY9 931 aa14.21□□□□□ -0.13
SCAF1-202ENST00000595242 FAM193BQ96PV7 902 aaPredicted RBP14.21□□□□□ -0.13
SCAF1-202ENST00000595242 NELL2Q99435 816 aa14.21□□□□□ -0.13
SCAF1-202ENST00000595242 PRKD2Q9BZL6 878 aa14.21□□□□□ -0.13
SCAF1-202ENST00000595242 PLEKHA4Q9H4M7 779 aa14.21□□□□□ -0.13
SCAF1-202ENST00000595242 FAM105AQ9NUU6 356 aa14.21□□□□□ -0.13
SCAF1-202ENST00000595242 FBXO2Q9UK22 296 aaPredicted RBP14.21□□□□□ -0.13
SCAF1-202ENST00000595242 A0A1B0GVL5 298 aa14.2□□□□□ -0.14
SCAF1-202ENST00000595242 hCG_1984214I3L0E3 225 aa14.2□□□□□ -0.14
SCAF1-202ENST00000595242 IPO5O00410 1097 aaKnown RBP14.2□□□□□ -0.14
SCAF1-202ENST00000595242 NCAM2O15394 837 aa14.2□□□□□ -0.14
SCAF1-202ENST00000595242 GAS2O43903 313 aaKnown RBP14.2□□□□□ -0.14
SCAF1-202ENST00000595242 LRP3O75074 770 aa14.2□□□□□ -0.14
SCAF1-202ENST00000595242 ZNF623O75123 536 aa14.2□□□□□ -0.14
SCAF1-202ENST00000595242 FOSP01100 380 aaPredicted RBP14.2□□□□□ -0.14
SCAF1-202ENST00000595242 FSHRP23945 695 aa14.2□□□□□ -0.14
SCAF1-202ENST00000595242 PMLP29590 882 aa14.2□□□□□ -0.14
SCAF1-202ENST00000595242 GLUD2P49448 558 aa14.2□□□□□ -0.14
SCAF1-202ENST00000595242 SHC2P98077 582 aa14.2□□□□□ -0.14
SCAF1-202ENST00000595242 N4BP2L1Q5TBK1 243 aaPredicted RBP14.2□□□□□ -0.14
SCAF1-202ENST00000595242 PRR23CQ6ZRP0 262 aa14.2□□□□□ -0.14
SCAF1-202ENST00000595242 CELF5Q8N6W0 485 aaKnown RBP14.2□□□□□ -0.14
SCAF1-202ENST00000595242 ZNF713Q8N859 430 aaPredicted RBP14.2□□□□□ -0.14
SCAF1-202ENST00000595242 KRI1Q8N9T8 703 aaKnown RBP14.2□□□□□ -0.14
SCAF1-202ENST00000595242 CCDC148Q8NFR7 591 aa14.2□□□□□ -0.14
SCAF1-202ENST00000595242 DDX1Q92499 740 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms