RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 HSP90AA2PQ14568 343 aaPredicted RBP22.61■■□□□ 1.21
TRIM47-207ENST00000593089 HAUS3Q68CZ6 603 aa22.61■■□□□ 1.21
TRIM47-207ENST00000593089 FAM184AQ8NB25 1140 aa22.61■■□□□ 1.21
TRIM47-207ENST00000593089 FBXO18Q8NFZ0 1043 aa22.61■■□□□ 1.21
TRIM47-207ENST00000593089 DEPTORQ8TB45 409 aa22.61■■□□□ 1.21
TRIM47-207ENST00000593089 SMG7Q92540 1137 aaKnown RBP22.61■■□□□ 1.21
TRIM47-207ENST00000593089 KCNK12Q9HB15 430 aa22.61■■□□□ 1.21
TRIM47-207ENST00000593089 POLD4Q9HCU8 107 aa22.61■■□□□ 1.21
TRIM47-207ENST00000593089 WDR6Q9NNW5 1121 aaKnown RBP22.61■■□□□ 1.21
TRIM47-207ENST00000593089 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.61■■□□□ 1.21
TRIM47-207ENST00000593089 CLUHO75153 1309 aa22.6■■□□□ 1.21
TRIM47-207ENST00000593089 N4BP1O75113 896 aaKnown RBP22.6■■□□□ 1.21
TRIM47-207ENST00000593089 CCT6AP40227 531 aaKnown RBP22.6■■□□□ 1.21
TRIM47-207ENST00000593089 NAMPTP43490 491 aa22.6■■□□□ 1.21
TRIM47-207ENST00000593089 RBM25P49756 843 aaKnown RBP22.6■■□□□ 1.21
TRIM47-207ENST00000593089 NUBP1P53384 320 aa22.6■■□□□ 1.21
TRIM47-207ENST00000593089 NBR1Q14596 966 aa22.6■■□□□ 1.21
TRIM47-207ENST00000593089 PRSS55Q6UWB4 352 aaPredicted RBP22.6■■□□□ 1.21
TRIM47-207ENST00000593089 NOSTRINQ8IVI9 506 aa22.6■■□□□ 1.21
TRIM47-207ENST00000593089 ADPGKQ9BRR6 497 aa22.6■■□□□ 1.21
TRIM47-207ENST00000593089 CCDC113Q9H0I3 377 aa22.6■■□□□ 1.21
TRIM47-207ENST00000593089 CXCL16Q9H2A7 254 aa22.6■■□□□ 1.21
TRIM47-207ENST00000593089 PIDD1Q9HB75 910 aa22.6■■□□□ 1.21
TRIM47-207ENST00000593089 FNIP2Q9P278 1114 aa22.6■■□□□ 1.21
TRIM47-207ENST00000593089 SF3B1O75533 1304 aaKnown RBP eCLIP22.59■■□□□ 1.21
TRIM47-207ENST00000593089 ACKR2O00590 384 aa22.59■■□□□ 1.21
TRIM47-207ENST00000593089 PTGESO14684 152 aa22.59■■□□□ 1.21
TRIM47-207ENST00000593089 GALR2O43603 387 aaPredicted RBP22.59■■□□□ 1.21
TRIM47-207ENST00000593089 RECQL4O94761 1208 aa22.59■■□□□ 1.21
TRIM47-207ENST00000593089 EDN1P05305 212 aa22.59■■□□□ 1.21
TRIM47-207ENST00000593089 HMGN5P82970 282 aaKnown RBP22.59■■□□□ 1.21
TRIM47-207ENST00000593089 ECM1Q16610 540 aa22.59■■□□□ 1.21
TRIM47-207ENST00000593089 RTP2Q5QGT7 225 aa22.59■■□□□ 1.21
TRIM47-207ENST00000593089 EEF1DP3Q658K8 133 aa22.59■■□□□ 1.21
TRIM47-207ENST00000593089 ASTLQ6HA08 431 aaPredicted RBP22.59■■□□□ 1.21
TRIM47-207ENST00000593089 CYP26C1Q6V0L0 522 aa22.59■■□□□ 1.21
TRIM47-207ENST00000593089 FLCNQ8NFG4 579 aa22.59■■□□□ 1.21
TRIM47-207ENST00000593089 HDAC7Q8WUI4 952 aa22.59■■□□□ 1.21
TRIM47-207ENST00000593089 STAMQ92783 540 aa22.59■■□□□ 1.21
TRIM47-207ENST00000593089 ZNF707Q96C28 371 aaPredicted RBP22.59■■□□□ 1.21
TRIM47-207ENST00000593089 ZSCAN31Q96LW9 406 aaPredicted RBP22.59■■□□□ 1.21
TRIM47-207ENST00000593089 KIFC3Q9BVG8 833 aa22.59■■□□□ 1.21
TRIM47-207ENST00000593089 IRF2BPLQ9H1B7 796 aa22.59■■□□□ 1.21
TRIM47-207ENST00000593089 PLEKHA4Q9H4M7 779 aa22.59■■□□□ 1.21
TRIM47-207ENST00000593089 NOL7Q9UMY1 257 aaKnown RBP22.59■■□□□ 1.21
TRIM47-207ENST00000593089 KIF4AO95239 1232 aa22.58■■□□□ 1.21
TRIM47-207ENST00000593089 THP07101 528 aa22.58■■□□□ 1.21
TRIM47-207ENST00000593089 CREMQ03060 361 aa22.58■■□□□ 1.21
TRIM47-207ENST00000593089 PPP2R5AQ15172 486 aa22.58■■□□□ 1.21
TRIM47-207ENST00000593089 CEP57Q86XR8 500 aa22.58■■□□□ 1.21
TRIM47-207ENST00000593089 GPR65Q8IYL9 337 aa22.58■■□□□ 1.21
TRIM47-207ENST00000593089 RSAD2Q8WXG1 361 aa22.58■■□□□ 1.21
TRIM47-207ENST00000593089 RHOBTB2Q9BYZ6 727 aa22.58■■□□□ 1.21
TRIM47-207ENST00000593089 NT5C3AQ9H0P0 336 aa22.58■■□□□ 1.21
TRIM47-207ENST00000593089 BHMT2Q9H2M3 363 aa22.58■■□□□ 1.21
TRIM47-207ENST00000593089 IGSF9Q9P2J2 1179 aa22.58■■□□□ 1.21
TRIM47-207ENST00000593089 LRWD1Q9UFC0 647 aa22.58■■□□□ 1.21
TRIM47-207ENST00000593089 FBXL21Q9UKT6 434 aa22.58■■□□□ 1.21
TRIM47-207ENST00000593089 DUSP12Q9UNI6 340 aa22.58■■□□□ 1.21
TRIM47-207ENST00000593089 GDAQ9Y2T3 454 aa22.58■■□□□ 1.21
TRIM47-207ENST00000593089 MUTP22033 750 aa22.57■■□□□ 1.2
TRIM47-207ENST00000593089 TRAPPC10P48553 1259 aa22.57■■□□□ 1.2
TRIM47-207ENST00000593089 FXR2P51116 673 aaKnown RBP eCLIP22.57■■□□□ 1.2
TRIM47-207ENST00000593089 FAM171A1Q5VUB5 890 aa22.57■■□□□ 1.2
TRIM47-207ENST00000593089 LILRA6Q6PI73 481 aa22.57■■□□□ 1.2
TRIM47-207ENST00000593089 C4orf32Q8N8J7 132 aa22.57■■□□□ 1.2
TRIM47-207ENST00000593089 IFT74Q96LB3 600 aa22.57■■□□□ 1.2
TRIM47-207ENST00000593089 MYADMQ96S97 322 aa22.57■■□□□ 1.2
TRIM47-207ENST00000593089 ZDHHC7Q9NXF8 308 aa22.57■■□□□ 1.2
TRIM47-207ENST00000593089 KIAA1024Q9UPX6 916 aa22.57■■□□□ 1.2
TRIM47-207ENST00000593089 NARSO43776 548 aaKnown RBP22.56■■□□□ 1.2
TRIM47-207ENST00000593089 C1RP00736 705 aa22.56■■□□□ 1.2
TRIM47-207ENST00000593089 NAB2Q15742 525 aa22.56■■□□□ 1.2
TRIM47-207ENST00000593089 CWF19L1Q69YN2 538 aaKnown RBP22.56■■□□□ 1.2
TRIM47-207ENST00000593089 TTPALQ9BTX7 342 aa22.56■■□□□ 1.2
TRIM47-207ENST00000593089 SH2B1Q9NRF2 756 aaPredicted RBP22.56■■□□□ 1.2
TRIM47-207ENST00000593089 DDX19AQ9NUU7 478 aaKnown RBP22.56■■□□□ 1.2
TRIM47-207ENST00000593089 CLCN5P51795 746 aa22.55■■□□□ 1.2
TRIM47-207ENST00000593089 GET4Q7L5D6 327 aaPredicted RBP22.55■■□□□ 1.2
TRIM47-207ENST00000593089 SNX29Q8TEQ0 813 aa22.55■■□□□ 1.2
TRIM47-207ENST00000593089 KIFAP3Q92845 792 aa22.55■■□□□ 1.2
TRIM47-207ENST00000593089 PRKD2Q9BZL6 878 aa22.55■■□□□ 1.2
TRIM47-207ENST00000593089 EPS15L1Q9UBC2 864 aa22.55■■□□□ 1.2
TRIM47-207ENST00000593089 DOCK8Q8NF50 2099 aa22.54■■□□□ 1.2
TRIM47-207ENST00000593089 GFRA3O60609 400 aa22.54■■□□□ 1.2
TRIM47-207ENST00000593089 ZMYND10O75800 440 aa22.54■■□□□ 1.2
TRIM47-207ENST00000593089 CFHP08603 1231 aa22.54■■□□□ 1.2
TRIM47-207ENST00000593089 NPR3P17342 541 aa22.54■■□□□ 1.2
TRIM47-207ENST00000593089 EFNA5P52803 228 aa22.54■■□□□ 1.2
TRIM47-207ENST00000593089 PTGDRQ13258 359 aa22.54■■□□□ 1.2
TRIM47-207ENST00000593089 PSMD5Q16401 504 aa22.54■■□□□ 1.2
TRIM47-207ENST00000593089 DCAF4L1Q3SXM0 396 aa22.54■■□□□ 1.2
TRIM47-207ENST00000593089 GLRA4Q5JXX5 417 aa22.54■■□□□ 1.2
TRIM47-207ENST00000593089 NT5DC1Q5TFE4 455 aa22.54■■□□□ 1.2
TRIM47-207ENST00000593089 ATF7IP2Q5U623 682 aa22.54■■□□□ 1.2
TRIM47-207ENST00000593089 SIX5Q8N196 739 aa22.54■■□□□ 1.2
TRIM47-207ENST00000593089 LNX1Q8TBB1 728 aaPredicted RBP22.54■■□□□ 1.2
TRIM47-207ENST00000593089 PIK3R5Q8WYR1 880 aa22.54■■□□□ 1.2
TRIM47-207ENST00000593089 KIF2CQ99661 725 aa22.54■■□□□ 1.2
TRIM47-207ENST00000593089 CLSTN3Q9BQT9 956 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms