RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 DBF4BQ8NFT6 615 aa13.03□□□□□ -0.32
DDX39A-219ENST00000592927 APBB2Q92870 758 aa13.03□□□□□ -0.32
DDX39A-219ENST00000592927 NTPCRQ9BSD7 190 aaKnown RBP13.03□□□□□ -0.32
DDX39A-219ENST00000592927 KIFC3Q9BVG8 833 aa13.03□□□□□ -0.32
DDX39A-219ENST00000592927 ERVK-5Q9HDB9 667 aa13.03□□□□□ -0.32
DDX39A-219ENST00000592927 SEL1LQ9UBV2 794 aa13.03□□□□□ -0.32
DDX39A-219ENST00000592927 RWDD2AQ9UIY3 292 aa13.03□□□□□ -0.32
DDX39A-219ENST00000592927 ST3GAL5Q9UNP4 418 aa13.03□□□□□ -0.32
DDX39A-219ENST00000592927 INSL6Q9Y581 213 aa13.03□□□□□ -0.32
DDX39A-219ENST00000592927 ABHD14A-ACY1A0A1B0GW23 586 aa13.02□□□□□ -0.33
DDX39A-219ENST00000592927 H3BNC9 293 aa13.02□□□□□ -0.33
DDX39A-219ENST00000592927 K7ERI5 159 aa13.02□□□□□ -0.33
DDX39A-219ENST00000592927 PSMA7O14818 248 aa13.02□□□□□ -0.33
DDX39A-219ENST00000592927 SLC16A4O15374 487 aa13.02□□□□□ -0.33
DDX39A-219ENST00000592927 NCK2O43639 380 aa13.02□□□□□ -0.33
DDX39A-219ENST00000592927 ERLIN2O94905 339 aa13.02□□□□□ -0.33
DDX39A-219ENST00000592927 CD44P16070 742 aaKnown RBP13.02□□□□□ -0.33
DDX39A-219ENST00000592927 FGFR4P22455 802 aa13.02□□□□□ -0.33
DDX39A-219ENST00000592927 NBL1P41271 181 aa13.02□□□□□ -0.33
DDX39A-219ENST00000592927 PRCPP42785 496 aa13.02□□□□□ -0.33
DDX39A-219ENST00000592927 MBTD1Q05BQ5 628 aa13.02□□□□□ -0.33
DDX39A-219ENST00000592927 SIGLEC14Q08ET2 396 aa13.02□□□□□ -0.33
DDX39A-219ENST00000592927 NCBP1Q09161 790 aaKnown RBP13.02□□□□□ -0.33
DDX39A-219ENST00000592927 COASYQ13057 564 aa13.02□□□□□ -0.33
DDX39A-219ENST00000592927 PAK1Q13153 545 aa13.02□□□□□ -0.33
DDX39A-219ENST00000592927 IKBKEQ14164 716 aa13.02□□□□□ -0.33
DDX39A-219ENST00000592927 NCAPHQ15003 741 aa13.02□□□□□ -0.33
DDX39A-219ENST00000592927 MAPK6Q16659 721 aa13.02□□□□□ -0.33
DDX39A-219ENST00000592927 CTC1Q2NKJ3 1217 aa13.02□□□□□ -0.33
DDX39A-219ENST00000592927 FAM26FQ5R3K3 315 aa13.02□□□□□ -0.33
DDX39A-219ENST00000592927 FOXR2Q6PJQ5 311 aa13.02□□□□□ -0.33
DDX39A-219ENST00000592927 SFR1Q86XK3 245 aa13.02□□□□□ -0.33
DDX39A-219ENST00000592927 GUF1Q8N442 669 aaKnown RBP13.02□□□□□ -0.33
DDX39A-219ENST00000592927 CNTNAP3BQ96NU0 1288 aa13.02□□□□□ -0.33
DDX39A-219ENST00000592927 CNTNAP3Q9BZ76 1288 aa13.02□□□□□ -0.33
DDX39A-219ENST00000592927 MINDY3Q9H8M7 445 aa13.02□□□□□ -0.33
DDX39A-219ENST00000592927 MRPL44Q9H9J2 332 aaKnown RBP13.02□□□□□ -0.33
DDX39A-219ENST00000592927 PRMT7Q9NVM4 692 aaPredicted RBP13.02□□□□□ -0.33
DDX39A-219ENST00000592927 ARHGAP28Q9P2N2 729 aa13.02□□□□□ -0.33
DDX39A-219ENST00000592927 GDAQ9Y2T3 454 aa13.02□□□□□ -0.33
DDX39A-219ENST00000592927 PHLPP2Q6ZVD8 1323 aa13.02□□□□□ -0.33
DDX39A-219ENST00000592927 ZFHX4Q86UP3 3567 aa13.01□□□□□ -0.33
DDX39A-219ENST00000592927 BICDL2A1A5D9 508 aa13.01□□□□□ -0.33
DDX39A-219ENST00000592927 DENND3A2RUS2 1198 aa13.01□□□□□ -0.33
DDX39A-219ENST00000592927 K7ENM7 598 aa13.01□□□□□ -0.33
DDX39A-219ENST00000592927 SCP2P22307 547 aa13.01□□□□□ -0.33
DDX39A-219ENST00000592927 NCKAP1LP55160 1127 aa13.01□□□□□ -0.33
DDX39A-219ENST00000592927 STK4Q13043 487 aa13.01□□□□□ -0.33
DDX39A-219ENST00000592927 SMAD4Q13485 552 aaKnown RBP13.01□□□□□ -0.33
DDX39A-219ENST00000592927 SPATA1Q5VX52 437 aa13.01□□□□□ -0.33
DDX39A-219ENST00000592927 SARM1Q6SZW1 724 aa13.01□□□□□ -0.33
DDX39A-219ENST00000592927 FAM43BQ6ZT52 329 aaPredicted RBP13.01□□□□□ -0.33
DDX39A-219ENST00000592927 HAUS6Q7Z4H7 955 aa13.01□□□□□ -0.33
DDX39A-219ENST00000592927 SMYD4Q8IYR2 804 aaPredicted RBP13.01□□□□□ -0.33
DDX39A-219ENST00000592927 TMEM161BQ8NDZ6 487 aa13.01□□□□□ -0.33
DDX39A-219ENST00000592927 FTHL17Q9BXU8 183 aa13.01□□□□□ -0.33
DDX39A-219ENST00000592927 TMEM134Q9H6X4 195 aa13.01□□□□□ -0.33
DDX39A-219ENST00000592927 OLFML3Q9NRN5 406 aa13.01□□□□□ -0.33
DDX39A-219ENST00000592927 TBC1D7Q9P0N9 293 aa13.01□□□□□ -0.33
DDX39A-219ENST00000592927 ADGRA3Q8IWK6 1321 aa13.01□□□□□ -0.33
DDX39A-219ENST00000592927 TANC1Q9C0D5 1861 aa13.01□□□□□ -0.33
DDX39A-219ENST00000592927 GALR2O43603 387 aaPredicted RBP13□□□□□ -0.33
DDX39A-219ENST00000592927 EFCAB14O75071 495 aa13□□□□□ -0.33
DDX39A-219ENST00000592927 PRKCBP05771 671 aa13□□□□□ -0.33
DDX39A-219ENST00000592927 MAPTP10636 758 aaKnown RBP13□□□□□ -0.33
DDX39A-219ENST00000592927 ZSCAN20P17040 1043 aaPredicted RBP13□□□□□ -0.33
DDX39A-219ENST00000592927 CCNE1P24864 410 aa13□□□□□ -0.33
DDX39A-219ENST00000592927 NMT1P30419 496 aaKnown RBP13□□□□□ -0.33
DDX39A-219ENST00000592927 ABCD1P33897 745 aa13□□□□□ -0.33
DDX39A-219ENST00000592927 CCDC173Q0VFZ6 552 aa13□□□□□ -0.33
DDX39A-219ENST00000592927 HYAL1Q12794 435 aa13□□□□□ -0.33
DDX39A-219ENST00000592927 STRN3Q13033 797 aa13□□□□□ -0.33
DDX39A-219ENST00000592927 FAM187BQ17R55 369 aa13□□□□□ -0.33
DDX39A-219ENST00000592927 TMEM132AQ24JP5 1023 aa13□□□□□ -0.33
DDX39A-219ENST00000592927 KLHL10Q6JEL2 608 aa13□□□□□ -0.33
DDX39A-219ENST00000592927 PPP4R3CPQ6ZMV5 832 aa13□□□□□ -0.33
DDX39A-219ENST00000592927 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13□□□□□ -0.33
DDX39A-219ENST00000592927 KIAA0895Q8NCT3 520 aa13□□□□□ -0.33
DDX39A-219ENST00000592927 NELFBQ8WX92 580 aa13□□□□□ -0.33
DDX39A-219ENST00000592927 ASIC4Q96FT7 647 aa13□□□□□ -0.33
DDX39A-219ENST00000592927 PRIMPOLQ96LW4 560 aa13□□□□□ -0.33
DDX39A-219ENST00000592927 SAMD11Q96NU1 681 aa13□□□□□ -0.33
DDX39A-219ENST00000592927 CCDC113Q9H0I3 377 aa13□□□□□ -0.33
DDX39A-219ENST00000592927 TMX1Q9H3N1 280 aa13□□□□□ -0.33
DDX39A-219ENST00000592927 FZD8Q9H461 694 aa13□□□□□ -0.33
DDX39A-219ENST00000592927 CHST12Q9NRB3 414 aa13□□□□□ -0.33
DDX39A-219ENST00000592927 AGPAT5Q9NUQ2 364 aa13□□□□□ -0.33
DDX39A-219ENST00000592927 PIN4Q9Y237 131 aaKnown RBP13□□□□□ -0.33
DDX39A-219ENST00000592927 PLXNA3P51805 1871 aa12.99□□□□□ -0.33
DDX39A-219ENST00000592927 DMDP11532 3685 aa12.99□□□□□ -0.33
DDX39A-219ENST00000592927 UBE4BO95155 1302 aa12.99□□□□□ -0.33
DDX39A-219ENST00000592927 ACKR2O00590 384 aa12.99□□□□□ -0.33
DDX39A-219ENST00000592927 TSPAN1O60635 241 aa12.99□□□□□ -0.33
DDX39A-219ENST00000592927 GCNT3O95395 438 aa12.99□□□□□ -0.33
DDX39A-219ENST00000592927 AXLP30530 894 aa12.99□□□□□ -0.33
DDX39A-219ENST00000592927 NUBP1P53384 320 aa12.99□□□□□ -0.33
DDX39A-219ENST00000592927 PRPF4BQ13523 1007 aaKnown RBP12.99□□□□□ -0.33
DDX39A-219ENST00000592927 AMHR2Q16671 573 aa12.99□□□□□ -0.33
DDX39A-219ENST00000592927 TPD52L1Q16890 204 aaPredicted RBP12.99□□□□□ -0.33
DDX39A-219ENST00000592927 STXBP4Q6ZWJ1 553 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms